Advances in Taxonomy, Ecology, and Biogeography of Dirivultidae (Copepoda) Associated with Chemosynthetic Environments in the Deep Sea
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{"title"=>"Advances in taxonomy, ecology, and biogeography of dirivultidae (Copepoda) associated with chemosynthetic environments in the deep sea", "type"=>"journal", "authors"=>[{"first_name"=>"Sabine", "last_name"=>"Gollner", "scopus_author_id"=>"12141323600"}, {"first_name"=>"Viatcheslav N.", "last_name"=>"Ivanenko", "scopus_author_id"=>"7006497614"}, {"first_name"=>"Pedro Martínez", "last_name"=>"Arbizu", "scopus_author_id"=>"6505935773"}, {"first_name"=>"Monika", "last_name"=>"Bright", "scopus_author_id"=>"7005055304"}], "year"=>2010, "source"=>"PLoS ONE", "identifiers"=>{"isbn"=>"1932-6203", "scopus"=>"2-s2.0-77957963278", "pui"=>"359771487", "doi"=>"10.1371/journal.pone.0009801", "sgr"=>"77957963278", "pmid"=>"20838422", "issn"=>"19326203"}, "id"=>"976a496e-86c6-390b-9ffe-55e707f74dd4", "abstract"=>"BACKGROUND: Copepoda is one of the most prominent higher taxa with almost 80 described species at deep-sea hydrothermal vents. The unique copepod family Dirivultidae with currently 50 described species is the most species rich invertebrate family at hydrothermal vents.\\n\\nMETHODOLOGY/PRINCIPAL FINDINGS: We reviewed the literature of Dirivultidae and provide a complete key to species, and map geographical and habitat specific distribution. In addition we discuss the ecology and origin of this family.\\n\\nCONCLUSIONS/SIGNIFICANCE: Dirivultidae are only present at deep-sea hydrothermal vents and along the axial summit trough of midocean ridges, with the exception of Dirivultus dentaneus found associated with Lamellibrachia species at 1125 m depth off southern California. To our current knowledge Dirivultidae are unknown from shallow-water vents, seeps, whale falls, and wood falls. They are a prominent part of all communities at vents and in certain habitat types (like sulfide chimneys colonized by pompei worms) they are the most abundant animals. They are free-living on hard substrate, mostly found in aggregations of various foundation species (e.g. alvinellids, vestimentiferans, and bivalves). Most dirivultid species colonize more than one habitat type. Dirivultids have a world-wide distribution, but most genera and species are endemic to a single biogeographic region. Their origin is unclear yet, but immigration from other deep-sea chemosynthetic habitats (stepping stone hypothesis) or from the deep-sea sediments seems unlikely, since Dirivultidae are unknown from these environments. Dirivultidae is the most species rich family and thus can be considered the most successful taxon at deep-sea vents.", "link"=>"http://www.mendeley.com/research/advances-taxonomy-ecology-biogeography-dirivultidae-copepoda-associated-chemosynthetic-environments", "reader_count"=>35, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Researcher"=>15, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>5, "Student > Master"=>4, "Student > Bachelor"=>2, "Professor"=>1, "Lecturer"=>4}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Researcher"=>15, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>5, "Student > Master"=>4, "Student > Bachelor"=>2, "Professor"=>1, "Lecturer"=>4}, "reader_count_by_subject_area"=>{"Environmental Science"=>3, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>21, "Business, Management and Accounting"=>1, "Chemistry"=>2, "Social Sciences"=>1, "Immunology and Microbiology"=>1, "Earth and Planetary Sciences"=>1, "Psychology"=>4}, "reader_count_by_subdiscipline"=>{"Chemistry"=>{"Chemistry"=>2}, "Social Sciences"=>{"Social Sciences"=>1}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>1}, "Psychology"=>{"Psychology"=>4}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>21}, "Business, Management and Accounting"=>{"Business, Management and Accounting"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Environmental Science"=>{"Environmental Science"=>3}}, "reader_count_by_country"=>{"Denmark"=>1, "Mexico"=>2, "United Kingdom"=>1, "Germany"=>1}, "group_count"=>2}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/832683"], "description"=>"<p>Sex is given for male (m) and female (f). We distinguished between four biogeographic regions: Atlantic (A), East Pacific (EP), North East Pacific (NEP), and West Pacific (WP). Habitat preferences were differentiated into bivalves (biv), vestimentiferans (ves), alvinellids (alv), shrimp (shr), bacterial mats (bac), and plankton (pla). X indicates presence. In addition to the authors' information, also other references are given for findings of each species (ref#).</p>", "links"=>[], "tags"=>["dirivultid"], "article_id"=>503052, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t005", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Information_on_all_dirivultid_species_including_authorship_known_sexes_biogeography_and_habitat_preference_/503052", "title"=>"Information on all dirivultid species including authorship, known sexes, biogeography, and habitat preference.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:42:21"}
  • {"files"=>["https://ndownloader.figshare.com/files/832625"], "description"=>"<p>Location, depth, habitat type (bac mats = bacterial mats; ass. = associated with) and relative abundance of Copepoda within the meiofauna community (% of meio), relative abundance of Dirivultidae within the copepod community (% of cope), and relative abundance of Harpacticoida within the copepod community (% of cope) are given. Reference (ref#) is given for each record. po personal observation.</p>", "links"=>[], "tags"=>["abundance", "dirivultid", "harpacticoid", "copepods", "chemosynthetic"], "article_id"=>502993, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t006", "stats"=>{"downloads"=>8, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Relative_abundance_of_dirivultid_and_harpacticoid_copepods_in_chemosynthetic_environments_/502993", "title"=>"Relative abundance of dirivultid and harpacticoid copepods in chemosynthetic environments.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:41:59"}
  • {"files"=>["https://ndownloader.figshare.com/files/832654"], "description"=>"<p>First, <i>Stygiopontius</i> species can be distinguished by the setation of the 3<sup>rd</sup> exopodal segment of leg 4 (exo 4, 3<sup>rd</sup>) (setae are represented by Arabic numbers, spines by Latin numbers). Second, the number of coxal setae (if present, and on which leg it is present) has to be determined (see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1G</a> as an example of a coxal seta). Third, there are some additional characters allowing the final species identification of <i>Stygiopontius</i>. Used abbreviations: antennule (A1), antenna (A2), female (f), male (m), maxilliped (mxp).</p>", "links"=>[], "tags"=>["ecology/community ecology and biodiversity", "ecology/marine and freshwater ecology", "marine and aquatic sciences/evolutionary biology"], "article_id"=>503023, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t004", "stats"=>{"downloads"=>5, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Species_key_of_Dirivultidae_Stygiopontius_/503023", "title"=>"Species key of Dirivultidae: <i>Stygiopontius</i>.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:42:11"}
  • {"files"=>["https://ndownloader.figshare.com/files/832309"], "description"=>"<p>The figure was created by selecting drawings of previous publications and adding additional information to illustrate the key to genera (<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-t001\" target=\"_blank\">Table 1</a>) and to species (<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-t002\" target=\"_blank\">Tables 2</a>, <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-t003\" target=\"_blank\">3</a>, <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-t004\" target=\"_blank\">4</a>). A: lateral view of a dirivultid (length ∼1 mm) <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Desbruyres1\" target=\"_blank\">[3]</a>. B–H ventral view of: B: antenna of <i>Stygiopontius lauensis </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes9\" target=\"_blank\">[18]</a>. C: antenna of <i>Ceuthoecetes introversus </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes1\" target=\"_blank\">[9]</a>. D: oral cone of <i>Benthoxynus spiculifer </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes4\" target=\"_blank\">[13]</a>. E: oral cone of <i>C. introversus </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes1\" target=\"_blank\">[9]</a>. F: maxilliped of <i>S. lauensis </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes9\" target=\"_blank\">[18]</a>. G: leg 1 of <i>S. lauensis </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes9\" target=\"_blank\">[18]</a>. H: leg 4 of <i>S. lauensis </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes9\" target=\"_blank\">[18]</a>. I: dorsal view of urosome of <i>Aphotopontius acanthinus </i><a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Humes10\" target=\"_blank\">[19]</a>. Scale bars: B–H: 100 µm; I: 200 µm.</p>", "links"=>[], "tags"=>["drawings", "dirivultid", "morphology", "characters", "genus"], "article_id"=>502672, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.g001", "stats"=>{"downloads"=>5, "page_views"=>137, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Schematic_drawings_of_dirivultid_morphology_and_important_characters_for_identification_on_genus_and_species_level_/502672", "title"=>"Schematic drawings of dirivultid morphology and important characters for identification on genus and species level.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 23:40:18"}
  • {"files"=>["https://ndownloader.figshare.com/files/832420"], "description"=>"<p>A: habitus, ventral view. B: habitus, dorsal view. C: oral cone and anterior appendages. Scale bars 100 µm. (A, B: <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-Desbruyres1\" target=\"_blank\">[3]</a>; C: by VNI).</p>", "links"=>[], "tags"=>["sem"], "article_id"=>502798, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.g002", "stats"=>{"downloads"=>8, "page_views"=>29, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Stygiopontius_pectinatus_female_SEM_micrographs_/502798", "title"=>"<i>Stygiopontius pectinatus</i> (female) SEM micrographs.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 23:40:56"}
  • {"files"=>["https://ndownloader.figshare.com/files/832537"], "description"=>"<p>Current findings of dirivultid genera on mid-ocean ridges and back-arc basins in the Atlantic (red color code), North East Pacific (green color code), East Pacific (blue color code), and West Pacific (purple color code). The number of species is given between brackets. Map modified after Van Dover et al. <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone.0009801-VanDover2\" target=\"_blank\">[69]</a>.</p>", "links"=>[], "tags"=>["dirivultid"], "article_id"=>502908, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.g003", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Worldwide_distribution_of_dirivultid_genera_/502908", "title"=>"Worldwide distribution of dirivultid genera.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 23:41:33"}
  • {"files"=>["https://ndownloader.figshare.com/files/832760"], "description"=>"<p>Used abbreviations: antennule (A1), female (f), male (m), length (l), width (w), maxilliped (mxp), segment (seg).</p>", "links"=>[], "tags"=>["ecology/community ecology and biodiversity", "ecology/marine and freshwater ecology", "marine and aquatic sciences/evolutionary biology"], "article_id"=>503129, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t003", "stats"=>{"downloads"=>1, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Species_key_of_Dirivultidae_Benthoxynus_Ceuthoecetes_Dirivultus_Exrima_Rhogobius_/503129", "title"=>"Species key of Dirivultidae: <i>Benthoxynus</i>, <i>Ceuthoecetes</i>, <i>Dirivultus</i>, <i>Exrima</i>, <i>Rhogobius</i>.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:42:41"}
  • {"files"=>["https://ndownloader.figshare.com/files/832709"], "description"=>"<p>First, species of this genus can be distinguished by the ratio of length to width of the caudal ramus (caudal ramus l∶w). Second, species can be discriminated by the presence or absence of spiniform processes (S) on the genital somite of female (f) and male (m) (e.g. <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1I</a> shows <i>A. acanthinus</i> with a caudal ramus ratio of length∶width with 2∶1; the female genital double somite has spiniform processes). Other species characters include the shape of various parts of the body (i.e. the maxilliped (mxp), see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1F</a>).</p>", "links"=>[], "tags"=>["ecology/community ecology and biodiversity", "ecology/marine and freshwater ecology", "marine and aquatic sciences/evolutionary biology"], "article_id"=>503084, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t002", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Species_key_of_Dirivultidae_Aphotopontius_/503084", "title"=>"Species key of Dirivultidae: <i>Aphotopontius</i>.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:42:31"}
  • {"files"=>["https://ndownloader.figshare.com/files/832787"], "description"=>"<p>Dirivultid genera and number of described species within each genus (#). Genera can be distinguished by the number of setae (Arabic numbers) and spines (Latin numbers) on their leg 4 endopod. 1<sup>st</sup> indicates setation of the first segment of leg 4 endopod, 2<sup>nd</sup> indicates setation of the second segment of leg 4 endopod (see for example <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1H</a>, showing leg 4 of <i>Stygiopontius</i>). The first step of genus identification is to analyze leg 4 endopod, afterwards the description of other characters should be followed. Other characters include number of segments and setation of other legs (terminology of different parts of legs see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1A and 1G</a>), number of setae on caudal rami and lobe presence/absence at anal somite (see for example <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1I</a> showing <i>Aphotopontius</i> with 6 setae on caudal rami and anal somite without lobes), shape of antenna (A2) (<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1B</a> shows a typical antenna of Dirivultidae; <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0009801#pone-0009801-g001\" target=\"_blank\">Figure 1C</a> shows the antenna with a hook like claw as typical for the genera <i>Ceuthoecetes</i>, <i>Dirivultus</i>, and <i>Nilva</i>), and number of segments in antennule (A1).</p>", "links"=>[], "tags"=>["ecology/community ecology and biodiversity", "ecology/marine and freshwater ecology", "marine and aquatic sciences/evolutionary biology"], "article_id"=>503154, "categories"=>["Marine Biology", "Ecology"], "users"=>["Sabine Gollner", "Viatcheslav N. Ivanenko", "Pedro Martínez Arbizu", "Monika Bright"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0009801.t001", "stats"=>{"downloads"=>1, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Genus_key_of_Dirivultidae_/503154", "title"=>"Genus key of Dirivultidae.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 23:42:51"}

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Relative Metric

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