Genomic and Proteomic Analyses of the Fungus Arthrobotrys oligospora Provide Insights into Nematode-Trap Formation
Events
Loading … Spinner

Mendeley | Further Information

{"title"=>"Genomic and proteomic analyses of the fungus arthrobotrys oligospora provide insights into nematode-trap formation", "type"=>"journal", "authors"=>[{"first_name"=>"Jinkui", "last_name"=>"Yang", "scopus_author_id"=>"35313241100"}, {"first_name"=>"Lei", "last_name"=>"Wang", "scopus_author_id"=>"36066093100"}, {"first_name"=>"Xinglai", "last_name"=>"Ji", "scopus_author_id"=>"7402840255"}, {"first_name"=>"Yun", "last_name"=>"Feng", "scopus_author_id"=>"53867795000"}, {"first_name"=>"Xiaomin", "last_name"=>"Li", "scopus_author_id"=>"55718118700"}, {"first_name"=>"Chenggang", "last_name"=>"Zou", "scopus_author_id"=>"55933889800"}, {"first_name"=>"Jianping", "last_name"=>"Xu", "scopus_author_id"=>"35331070700"}, {"first_name"=>"Yan", "last_name"=>"Ren", "scopus_author_id"=>"56307071600"}, {"first_name"=>"Qili", "last_name"=>"Mi", "scopus_author_id"=>"24725263400"}, {"first_name"=>"Junli", "last_name"=>"Wu", "scopus_author_id"=>"56093735300"}, {"first_name"=>"Shuqun", "last_name"=>"Liu", "scopus_author_id"=>"7409459255"}, {"first_name"=>"Yu", "last_name"=>"Liu", "scopus_author_id"=>"57192563141"}, {"first_name"=>"Xiaowei", "last_name"=>"Huang", "scopus_author_id"=>"35203515300"}, {"first_name"=>"Haiyan", "last_name"=>"Wang", "scopus_author_id"=>"57196428819"}, {"first_name"=>"Xuemei", "last_name"=>"Niu", "scopus_author_id"=>"7103278466"}, {"first_name"=>"Juan", "last_name"=>"Li", "scopus_author_id"=>"56075119800"}, {"first_name"=>"Lianming", "last_name"=>"Liang", "scopus_author_id"=>"16245399300"}, {"first_name"=>"Yanlu", "last_name"=>"Luo", "scopus_author_id"=>"53867948700"}, {"first_name"=>"Kaifang", "last_name"=>"Ji", "scopus_author_id"=>"53868162800"}, {"first_name"=>"Wei", "last_name"=>"Zhou", "scopus_author_id"=>"36049094500"}, {"first_name"=>"Zefen", "last_name"=>"Yu", "scopus_author_id"=>"8401490800"}, {"first_name"=>"Guohong", "last_name"=>"Li", "scopus_author_id"=>"55714231100"}, {"first_name"=>"Yajun", "last_name"=>"Liu", "scopus_author_id"=>"55742043600"}, {"first_name"=>"Lei", "last_name"=>"Li", "scopus_author_id"=>"56440401700"}, {"first_name"=>"Min", "last_name"=>"Qiao", "scopus_author_id"=>"10139920600"}, {"first_name"=>"Lu", "last_name"=>"Feng", "scopus_author_id"=>"8086697800"}, {"first_name"=>"Ke Qin", "last_name"=>"Zhang", "scopus_author_id"=>"55615207900"}], "year"=>2011, "source"=>"PLoS Pathogens", "identifiers"=>{"issn"=>"15537366", "pui"=>"362681253", "sgr"=>"80053445520", "isbn"=>"1553-7374 (Electronic)\\r1553-7366 (Linking)", "scopus"=>"2-s2.0-80053445520", "pmid"=>"21909256", "doi"=>"10.1371/journal.ppat.1002179"}, "id"=>"4b7ffe7c-45da-3468-80f8-e8629ddc28db", "abstract"=>"Nematode-trapping fungi are \"carnivorous\" and attack their hosts using specialized trapping devices. The morphological development of these traps is the key indicator of their switch from saprophytic to predacious lifestyles. Here, the genome of the nematode-trapping fungus Arthrobotrys oligospora Fres. (ATCC24927) was reported. The genome contains 40.07 Mb assembled sequence with 11,479 predicted genes. Comparative analysis showed that A. oligospora shared many more genes with pathogenic fungi than with non-pathogenic fungi. Specifically, compared to several sequenced ascomycete fungi, the A. oligospora genome has a larger number of pathogenicity-related genes in the subtilisin, cellulase, cellobiohydrolase, and pectinesterase gene families. Searching against the pathogen-host interaction gene database identified 398 homologous genes involved in pathogenicity in other fungi. The analysis of repetitive sequences provided evidence for repeat-induced point mutations in A. oligospora. Proteomic and quantitative PCR (qPCR) analyses revealed that 90 genes were significantly up-regulated at the early stage of trap-formation by nematode extracts and most of these genes were involved in translation, amino acid metabolism, carbohydrate metabolism, cell wall and membrane biogenesis. Based on the combined genomic, proteomic and qPCR data, a model for the formation of nematode trapping device in this fungus was proposed. In this model, multiple fungal signal transduction pathways are activated by its nematode prey to further regulate downstream genes associated with diverse cellular processes such as energy metabolism, biosynthesis of the cell wall and adhesive proteins, cell division, glycerol accumulation and peroxisome biogenesis. This study will facilitate the identification of pathogenicity-related genes and provide a broad foundation for understanding the molecular and evolutionary mechanisms underlying fungi-nematodes interactions.", "link"=>"http://www.mendeley.com/research/genomic-proteomic-analyses-fungus-arthrobotrys-oligospora-provide-insights-nematodetrap-formation", "reader_count"=>62, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>2, "Researcher"=>13, "Student > Doctoral Student"=>4, "Student > Ph. D. Student"=>16, "Student > Postgraduate"=>2, "Student > Master"=>15, "Student > Bachelor"=>7, "Lecturer"=>1, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>2, "Researcher"=>13, "Student > Doctoral Student"=>4, "Student > Ph. D. Student"=>16, "Student > Postgraduate"=>2, "Student > Master"=>15, "Student > Bachelor"=>7, "Lecturer"=>1, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Environmental Science"=>2, "Biochemistry, Genetics and Molecular Biology"=>5, "Mathematics"=>1, "Agricultural and Biological Sciences"=>44, "Medicine and Dentistry"=>4, "Philosophy"=>1, "Computer Science"=>1, "Immunology and Microbiology"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>4}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>44}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>5}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>2}, "Philosophy"=>{"Philosophy"=>1}}, "reader_count_by_country"=>{"Canada"=>1, "United States"=>1, "Luxembourg"=>1, "Brazil"=>1, "Denmark"=>1, "South Africa"=>1, "Australia"=>1, "India"=>1}, "group_count"=>1}

CrossRef

Scopus | Further Information

{"@_fa"=>"true", "link"=>[{"@_fa"=>"true", "@ref"=>"self", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/80053445520"}, {"@_fa"=>"true", "@ref"=>"author-affiliation", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/80053445520?field=author,affiliation"}, {"@_fa"=>"true", "@ref"=>"scopus", "@href"=>"https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=80053445520&origin=inward"}, {"@_fa"=>"true", "@ref"=>"scopus-citedby", "@href"=>"https://www.scopus.com/inward/citedby.uri?partnerID=HzOxMe3b&scp=80053445520&origin=inward"}], "prism:url"=>"https://api.elsevier.com/content/abstract/scopus_id/80053445520", "dc:identifier"=>"SCOPUS_ID:80053445520", "eid"=>"2-s2.0-80053445520", "dc:title"=>"Genomic and proteomic analyses of the fungus arthrobotrys oligospora provide insights into nematode-trap formation", "dc:creator"=>"Yang J.", "prism:publicationName"=>"PLoS Pathogens", "prism:issn"=>"15537366", "prism:eIssn"=>"15537374", "prism:volume"=>"7", "prism:issueIdentifier"=>"9", "prism:pageRange"=>nil, "prism:coverDate"=>"2011-09-01", "prism:coverDisplayDate"=>"September 2011", "prism:doi"=>"10.1371/journal.ppat.1002179", "citedby-count"=>"74", "affiliation"=>[{"@_fa"=>"true", "affilname"=>"Yunnan University", "affiliation-city"=>"Kunming", "affiliation-country"=>"China"}], "pubmed-id"=>"21909256", "prism:aggregationType"=>"Journal", "subtype"=>"ar", "subtypeDescription"=>"Article", "article-number"=>"e1002179", "source-id"=>"4000151809"}

Facebook

  • {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fplospathogens%2Farticle%3Fid%3D10.1371%252Fjournal.ppat.1002179", "share_count"=>0, "like_count"=>0, "comment_count"=>0, "click_count"=>0, "total_count"=>0}

Counter

  • {"month"=>"9", "year"=>"2011", "pdf_views"=>"133", "xml_views"=>"3", "html_views"=>"568"}
  • {"month"=>"10", "year"=>"2011", "pdf_views"=>"91", "xml_views"=>"1", "html_views"=>"236"}
  • {"month"=>"11", "year"=>"2011", "pdf_views"=>"59", "xml_views"=>"5", "html_views"=>"182"}
  • {"month"=>"12", "year"=>"2011", "pdf_views"=>"31", "xml_views"=>"0", "html_views"=>"130"}
  • {"month"=>"1", "year"=>"2012", "pdf_views"=>"35", "xml_views"=>"0", "html_views"=>"148"}
  • {"month"=>"2", "year"=>"2012", "pdf_views"=>"40", "xml_views"=>"0", "html_views"=>"192"}
  • {"month"=>"3", "year"=>"2012", "pdf_views"=>"44", "xml_views"=>"0", "html_views"=>"142"}
  • {"month"=>"4", "year"=>"2012", "pdf_views"=>"39", "xml_views"=>"2", "html_views"=>"127"}
  • {"month"=>"5", "year"=>"2012", "pdf_views"=>"49", "xml_views"=>"0", "html_views"=>"135"}
  • {"month"=>"6", "year"=>"2012", "pdf_views"=>"30", "xml_views"=>"1", "html_views"=>"106"}
  • {"month"=>"7", "year"=>"2012", "pdf_views"=>"22", "xml_views"=>"0", "html_views"=>"103"}
  • {"month"=>"8", "year"=>"2012", "pdf_views"=>"27", "xml_views"=>"4", "html_views"=>"121"}
  • {"month"=>"9", "year"=>"2012", "pdf_views"=>"41", "xml_views"=>"0", "html_views"=>"161"}
  • {"month"=>"10", "year"=>"2012", "pdf_views"=>"34", "xml_views"=>"0", "html_views"=>"224"}
  • {"month"=>"11", "year"=>"2012", "pdf_views"=>"44", "xml_views"=>"0", "html_views"=>"305"}
  • {"month"=>"12", "year"=>"2012", "pdf_views"=>"16", "xml_views"=>"0", "html_views"=>"153"}
  • {"month"=>"1", "year"=>"2013", "pdf_views"=>"38", "xml_views"=>"1", "html_views"=>"212"}
  • {"month"=>"2", "year"=>"2013", "pdf_views"=>"26", "xml_views"=>"2", "html_views"=>"367"}
  • {"month"=>"3", "year"=>"2013", "pdf_views"=>"43", "xml_views"=>"1", "html_views"=>"323"}
  • {"month"=>"4", "year"=>"2013", "pdf_views"=>"41", "xml_views"=>"1", "html_views"=>"218"}
  • {"month"=>"5", "year"=>"2013", "pdf_views"=>"52", "xml_views"=>"0", "html_views"=>"414"}
  • {"month"=>"6", "year"=>"2013", "pdf_views"=>"28", "xml_views"=>"0", "html_views"=>"106"}
  • {"month"=>"7", "year"=>"2013", "pdf_views"=>"33", "xml_views"=>"0", "html_views"=>"125"}
  • {"month"=>"8", "year"=>"2013", "pdf_views"=>"27", "xml_views"=>"1", "html_views"=>"130"}
  • {"month"=>"9", "year"=>"2013", "pdf_views"=>"21", "xml_views"=>"0", "html_views"=>"166"}
  • {"month"=>"10", "year"=>"2013", "pdf_views"=>"20", "xml_views"=>"3", "html_views"=>"234"}
  • {"month"=>"11", "year"=>"2013", "pdf_views"=>"43", "xml_views"=>"3", "html_views"=>"446"}
  • {"month"=>"12", "year"=>"2013", "pdf_views"=>"22", "xml_views"=>"1", "html_views"=>"247"}
  • {"month"=>"1", "year"=>"2014", "pdf_views"=>"22", "xml_views"=>"1", "html_views"=>"268"}
  • {"month"=>"2", "year"=>"2014", "pdf_views"=>"33", "xml_views"=>"0", "html_views"=>"393"}
  • {"month"=>"3", "year"=>"2014", "pdf_views"=>"61", "xml_views"=>"1", "html_views"=>"494"}
  • {"month"=>"4", "year"=>"2014", "pdf_views"=>"17", "xml_views"=>"3", "html_views"=>"356"}
  • {"month"=>"5", "year"=>"2014", "pdf_views"=>"42", "xml_views"=>"0", "html_views"=>"462"}
  • {"month"=>"6", "year"=>"2014", "pdf_views"=>"19", "xml_views"=>"0", "html_views"=>"267"}
  • {"month"=>"7", "year"=>"2014", "pdf_views"=>"22", "xml_views"=>"1", "html_views"=>"287"}
  • {"month"=>"8", "year"=>"2014", "pdf_views"=>"18", "xml_views"=>"2", "html_views"=>"228"}
  • {"month"=>"9", "year"=>"2014", "pdf_views"=>"25", "xml_views"=>"1", "html_views"=>"330"}
  • {"month"=>"10", "year"=>"2014", "pdf_views"=>"15", "xml_views"=>"1", "html_views"=>"231"}
  • {"month"=>"11", "year"=>"2014", "pdf_views"=>"20", "xml_views"=>"4", "html_views"=>"239"}
  • {"month"=>"12", "year"=>"2014", "pdf_views"=>"23", "xml_views"=>"1", "html_views"=>"199"}
  • {"month"=>"1", "year"=>"2015", "pdf_views"=>"42", "xml_views"=>"0", "html_views"=>"237"}
  • {"month"=>"2", "year"=>"2015", "pdf_views"=>"28", "xml_views"=>"0", "html_views"=>"158"}
  • {"month"=>"3", "year"=>"2015", "pdf_views"=>"21", "xml_views"=>"0", "html_views"=>"165"}
  • {"month"=>"4", "year"=>"2015", "pdf_views"=>"14", "xml_views"=>"1", "html_views"=>"103"}
  • {"month"=>"5", "year"=>"2015", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"216"}
  • {"month"=>"6", "year"=>"2015", "pdf_views"=>"44", "xml_views"=>"0", "html_views"=>"124"}
  • {"month"=>"7", "year"=>"2015", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"121"}
  • {"month"=>"8", "year"=>"2015", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"90"}
  • {"month"=>"9", "year"=>"2015", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"86"}
  • {"month"=>"10", "year"=>"2015", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"94"}
  • {"month"=>"11", "year"=>"2015", "pdf_views"=>"31", "xml_views"=>"0", "html_views"=>"115"}
  • {"month"=>"12", "year"=>"2015", "pdf_views"=>"39", "xml_views"=>"0", "html_views"=>"106"}
  • {"month"=>"1", "year"=>"2016", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"67"}
  • {"month"=>"2", "year"=>"2016", "pdf_views"=>"44", "xml_views"=>"0", "html_views"=>"82"}
  • {"month"=>"3", "year"=>"2016", "pdf_views"=>"48", "xml_views"=>"0", "html_views"=>"164"}
  • {"month"=>"4", "year"=>"2016", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"128"}
  • {"month"=>"5", "year"=>"2016", "pdf_views"=>"59", "xml_views"=>"0", "html_views"=>"236"}
  • {"month"=>"6", "year"=>"2016", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"72"}
  • {"month"=>"7", "year"=>"2016", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"71"}
  • {"month"=>"8", "year"=>"2016", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"89"}
  • {"month"=>"9", "year"=>"2016", "pdf_views"=>"19", "xml_views"=>"0", "html_views"=>"81"}
  • {"month"=>"10", "year"=>"2016", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"97"}
  • {"month"=>"11", "year"=>"2016", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"136"}
  • {"month"=>"12", "year"=>"2016", "pdf_views"=>"32", "xml_views"=>"0", "html_views"=>"103"}
  • {"month"=>"1", "year"=>"2017", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"61"}
  • {"month"=>"2", "year"=>"2017", "pdf_views"=>"38", "xml_views"=>"0", "html_views"=>"112"}
  • {"month"=>"3", "year"=>"2017", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"132"}
  • {"month"=>"4", "year"=>"2017", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"81"}
  • {"month"=>"5", "year"=>"2017", "pdf_views"=>"25", "xml_views"=>"1", "html_views"=>"107"}
  • {"month"=>"6", "year"=>"2017", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"76"}
  • {"month"=>"7", "year"=>"2017", "pdf_views"=>"20", "xml_views"=>"2", "html_views"=>"63"}
  • {"month"=>"8", "year"=>"2017", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"37"}
  • {"month"=>"9", "year"=>"2017", "pdf_views"=>"12", "xml_views"=>"1", "html_views"=>"55"}
  • {"month"=>"10", "year"=>"2017", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"65"}
  • {"month"=>"11", "year"=>"2017", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"59"}
  • {"month"=>"12", "year"=>"2017", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"14"}

Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/740286"], "description"=>"<p>Several pathogenicity-related enzyme families were compared between <i>A. oligospora</i> and other 10 sequenced fungi including <i>A. fumigatus</i> (afu), <i>C. globosum</i> (cgl), <i>C. immitis</i> (cim), <i>A. nidulans</i> (eni), <i>F. graminearum</i> (fgr), <i>H. capsulatum</i> (hca), <i>M. grisea</i> (mgr), <i>N. crassa</i> (ncr), <i>S. cerevisiae</i> (sce) and <i>V. dahliae</i> (vda).</p>", "links"=>[], "tags"=>["pathogenicity-related", "sequenced"], "article_id"=>410625, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g005", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Comparison_of_pathogenicity_related_gene_families_between_A_oligospora_and_other_sequenced_fungi_/410625", "title"=>"Comparison of pathogenicity-related gene families between <i>A. oligospora</i> and other sequenced fungi.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:10:25"}
  • {"files"=>["https://ndownloader.figshare.com/files/373504", "https://ndownloader.figshare.com/files/373607", "https://ndownloader.figshare.com/files/373657", "https://ndownloader.figshare.com/files/373707", "https://ndownloader.figshare.com/files/373781", "https://ndownloader.figshare.com/files/373829", "https://ndownloader.figshare.com/files/373884", "https://ndownloader.figshare.com/files/373934", "https://ndownloader.figshare.com/files/374000", "https://ndownloader.figshare.com/files/374047", "https://ndownloader.figshare.com/files/374093", "https://ndownloader.figshare.com/files/374132", "https://ndownloader.figshare.com/files/374209", "https://ndownloader.figshare.com/files/374258", "https://ndownloader.figshare.com/files/374303", "https://ndownloader.figshare.com/files/374346"], "description"=>"<div><p>Nematode-trapping fungi are “carnivorous” and attack their hosts using specialized trapping devices. The morphological development of these traps is the key indicator of their switch from saprophytic to predacious lifestyles. Here, the genome of the nematode-trapping fungus <em>Arthrobotrys oligospora</em> Fres. (ATCC24927) was reported. The genome contains 40.07 Mb assembled sequence with 11,479 predicted genes. Comparative analysis showed that <em>A. oligospora</em> shared many more genes with pathogenic fungi than with non-pathogenic fungi. Specifically, compared to several sequenced ascomycete fungi, the <em>A. oligospora</em> genome has a larger number of pathogenicity-related genes in the subtilisin, cellulase, cellobiohydrolase, and pectinesterase gene families. Searching against the pathogen-host interaction gene database identified 398 homologous genes involved in pathogenicity in other fungi. The analysis of repetitive sequences provided evidence for repeat-induced point mutations in <em>A. oligospora</em>. Proteomic and quantitative PCR (qPCR) analyses revealed that 90 genes were significantly up-regulated at the early stage of trap-formation by nematode extracts and most of these genes were involved in translation, amino acid metabolism, carbohydrate metabolism, cell wall and membrane biogenesis. Based on the combined genomic, proteomic and qPCR data, a model for the formation of nematode trapping device in this fungus was proposed. In this model, multiple fungal signal transduction pathways are activated by its nematode prey to further regulate downstream genes associated with diverse cellular processes such as energy metabolism, biosynthesis of the cell wall and adhesive proteins, cell division, glycerol accumulation and peroxisome biogenesis. This study will facilitate the identification of pathogenicity-related genes and provide a broad foundation for understanding the molecular and evolutionary mechanisms underlying fungi-nematodes interactions.</p> </div>", "links"=>[], "tags"=>["genomic", "proteomic", "analyses", "fungus", "insights", "nematode-trap"], "article_id"=>133736, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>["https://dx.doi.org/10.1371/journal.ppat.1002179.s001", "https://dx.doi.org/10.1371/journal.ppat.1002179.s002", "https://dx.doi.org/10.1371/journal.ppat.1002179.s003", "https://dx.doi.org/10.1371/journal.ppat.1002179.s004", "https://dx.doi.org/10.1371/journal.ppat.1002179.s005", "https://dx.doi.org/10.1371/journal.ppat.1002179.s006", "https://dx.doi.org/10.1371/journal.ppat.1002179.s007", "https://dx.doi.org/10.1371/journal.ppat.1002179.s008", "https://dx.doi.org/10.1371/journal.ppat.1002179.s009", "https://dx.doi.org/10.1371/journal.ppat.1002179.s010", "https://dx.doi.org/10.1371/journal.ppat.1002179.s011", "https://dx.doi.org/10.1371/journal.ppat.1002179.s012", "https://dx.doi.org/10.1371/journal.ppat.1002179.s013", "https://dx.doi.org/10.1371/journal.ppat.1002179.s014", "https://dx.doi.org/10.1371/journal.ppat.1002179.s015", "https://dx.doi.org/10.1371/journal.ppat.1002179.s016"], "stats"=>{"downloads"=>34, "page_views"=>424, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Genomic_and_Proteomic_Analyses_of_the_Fungus_Arthrobotrys_oligospora_Provide_Insights_into_Nematode_Trap_Formation/133736", "title"=>"Genomic and Proteomic Analyses of the Fungus <em>Arthrobotrys oligospora</em> Provide Insights into Nematode-Trap Formation", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2011-09-01 01:02:16"}
  • {"files"=>["https://ndownloader.figshare.com/files/739769"], "description"=>"<p>The life cycle of <i>A. oligospora</i> includes three stages: saprophytic stage, transitional stage, and parasitic stage. The parasitic stage can be divided into the following six steps: I. Trap formation; II. Attraction; III. Adhesion; IV. Capturing; V, Penetration and immobilization; and VI. Digestion and assimilation. The saprophytic stage (VII) and sexual stage (VIII) are also shown.</p>", "links"=>[], "tags"=>["parasitic", "stages", "nematode-trapping", "fungus"], "article_id"=>410094, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g001", "stats"=>{"downloads"=>11, "page_views"=>398, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Saprophytic_and_parasitic_stages_of_the_nematode_trapping_fungus_A_oligospora_/410094", "title"=>"Saprophytic and parasitic stages of the nematode-trapping fungus <i>A. oligospora</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:01:34"}
  • {"files"=>["https://ndownloader.figshare.com/files/740529"], "description"=>"<p>Protein information can be found in <a href=\"http://www.plospathogens.org/article/info:doi/10.1371/journal.ppat.1002179#ppat.1002179.s012\" target=\"_blank\">Table S7</a> . In this model, multiple fungal signal transduction pathways are activated by its nematode prey to further regulate downstream genes associated with diverse cellular processes such as energy metabolism, biosynthesis of the cell wall and adhesive proteins, cell division, glycerol accumulation and peroxisome biogenesis. Black letters in red background represented the up-regulated proteins. Oval represented the 2-D results and quadrate represented the qPCR results.</p>", "links"=>[], "tags"=>["genetics and genomics", "microbiology", "Computational biology", "Biochemistry"], "article_id"=>410863, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g007", "stats"=>{"downloads"=>2, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_A_proposed_model_for_trap_formation_in_A_oligospora_/410863", "title"=>"A proposed model for trap formation in <i>A. oligospora.</i>", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:14:23"}
  • {"files"=>["https://ndownloader.figshare.com/files/740397"], "description"=>"<p>WT, wild-type strain. MT1 and MT2, mutant strains 1 and 2. Each point represents the average of five independent assays, and the bars represent the standard deviation values. *<i>P</i><0.05 versus wild strain.</p>", "links"=>[], "tags"=>["nematocidal"], "article_id"=>410737, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g006", "stats"=>{"downloads"=>1, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Disruption_of_the_gene_p186_and_nematocidal_activity_analysis_/410737", "title"=>"Disruption of the gene <i>p186</i> and nematocidal activity analysis.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:12:17"}
  • {"files"=>["https://ndownloader.figshare.com/files/740087"], "description"=>"<p>The other 10 fungal genomes were divided into non-pathogen and pathogen genomes. Based on orthology analysis, the genes in <i>A. oligospora</i> were classified into four categories: ao-specific (only found in <i>A. oligospora</i>), ao/pathogen (also found in pathogenic fungi), ao/pathogen/non-pathogen (found in all genomes) and ao/non-pathogen (also found in non-pathogenic fungi). A. The distribution of all <i>A. oligospora</i> genes in different categories. B. The distribution of PHI putative genes in different categories.</p>", "links"=>[], "tags"=>["distributions", "genes", "phi", "putative"], "article_id"=>410422, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g003", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_distributions_of_A_oligospora_genes_and_PHI_putative_genes_in_different_categories_/410422", "title"=>"The distributions of <i>A. oligospora</i> genes and PHI putative genes in different categories.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:07:02"}
  • {"files"=>["https://ndownloader.figshare.com/files/739926"], "description"=>"<p>The proteins were assigned into different KOG/COG functionary categories as shown in the pie chart. A. A total of 5762 proteins from <i>A. oligospora</i> genome were annotated by KOG/COG. B. Classification of the <i>A. oligospora</i> intracellular proteins detected by 2-DE. A total of 861 proteins were identified from <i>A. oligospora</i> cells treated with and without NE for 10 h and 48 h respectively.</p>", "links"=>[], "tags"=>["genome", "proteome"], "article_id"=>410263, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g002", "stats"=>{"downloads"=>5, "page_views"=>98, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Annotation_of_the_A_oligospora_genome_and_proteome_by_COG_KOG_categories_/410263", "title"=>"Annotation of the <i>A. oligospora</i> genome and proteome by COG/KOG categories.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:04:23"}
  • {"files"=>["https://ndownloader.figshare.com/files/740198"], "description"=>"<p>The phylogenomic tree was constructed based on orthologous proteins from 11 fungal genomes using Maximum likelihood method.</p>", "links"=>[], "tags"=>["phylogenomic", "was", "constructed", "orthologous", "proteins", "11", "fungal", "genomes"], "article_id"=>410522, "categories"=>["Biological Sciences", "Biochemistry", "Genetics", "Microbiology"], "users"=>["Jinkui Yang", "Lei Wang", "Xinglai Ji", "Yun Feng", "Xiaomin Li", "Chenggang Zou", "Jianping Xu", "Yan Ren", "Qili Mi", "Junli Wu", "Shuqun Liu", "Yu Liu", "Xiaowei Huang", "Haiyan Wang", "Xuemei Niu", "Juan Li", "Lianming Liang", "Yanlu Luo", "Kaifang Ji", "Wei Zhou", "Zefen Yu", "Guohong Li", "Yajun Liu", "Lei Li", "Min Qiao", "Lu Feng", "Ke-Qin Zhang"], "doi"=>"https://dx.doi.org/10.1371/journal.ppat.1002179.g004", "stats"=>{"downloads"=>0, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_phylogenomic_tree_was_constructed_based_on_orthologous_proteins_from_11_fungal_genomes_using_Maximum_likelihood_method_/410522", "title"=>"The phylogenomic tree was constructed based on orthologous proteins from 11 fungal genomes using Maximum likelihood method.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-09-01 00:08:42"}

PMC Usage Stats | Further Information

  • {"scanned-page-browse"=>"0", "month"=>"9", "cited-by"=>"0", "abstract"=>"2", "full-text"=>"35", "unique-ip"=>"36", "pdf"=>"22", "year"=>"2011", "figure"=>"7", "scanned-summary"=>"0", "supp-data"=>"2"}
  • {"month"=>"10", "scanned-page-browse"=>"0", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"46", "year"=>"2011", "pdf"=>"24", "unique-ip"=>"43", "figure"=>"16", "scanned-summary"=>"0", "supp-data"=>"8"}
  • {"scanned-page-browse"=>"0", "month"=>"11", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"25", "unique-ip"=>"21", "pdf"=>"4", "year"=>"2011", "figure"=>"1", "scanned-summary"=>"0", "supp-data"=>"4"}
  • {"month"=>"12", "scanned-page-browse"=>"0", "cited-by"=>"0", "abstract"=>"1", "full-text"=>"31", "year"=>"2011", "pdf"=>"13", "unique-ip"=>"28", "figure"=>"5", "scanned-summary"=>"0", "supp-data"=>"9"}
  • {"scanned-page-browse"=>"0", "month"=>"1", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"28", "unique-ip"=>"19", "pdf"=>"15", "year"=>"2012", "figure"=>"5", "scanned-summary"=>"0", "supp-data"=>"3"}
  • {"month"=>"2", "scanned-page-browse"=>"0", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"22", "year"=>"2012", "pdf"=>"10", "unique-ip"=>"25", "figure"=>"9", "scanned-summary"=>"0", "supp-data"=>"0"}
  • {"scanned-page-browse"=>"0", "month"=>"3", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"16", "unique-ip"=>"16", "pdf"=>"11", "year"=>"2012", "figure"=>"0", "scanned-summary"=>"0", "supp-data"=>"0"}
  • {"month"=>"4", "scanned-page-browse"=>"0", "cited-by"=>"0", "abstract"=>"1", "full-text"=>"22", "year"=>"2012", "pdf"=>"3", "unique-ip"=>"18", "figure"=>"2", "scanned-summary"=>"0", "supp-data"=>"0"}
  • {"scanned-page-browse"=>"0", "month"=>"5", "cited-by"=>"0", "abstract"=>"3", "full-text"=>"28", "unique-ip"=>"32", "pdf"=>"5", "year"=>"2012", "figure"=>"15", "scanned-summary"=>"0", "supp-data"=>"1"}
  • {"month"=>"6", "scanned-page-browse"=>"0", "cited-by"=>"0", "abstract"=>"0", "full-text"=>"27", "year"=>"2012", "pdf"=>"6", "unique-ip"=>"26", "figure"=>"1", "scanned-summary"=>"0", "supp-data"=>"3"}
  • {"unique-ip"=>"14", "full-text"=>"12", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2012", "month"=>"7"}
  • {"unique-ip"=>"24", "full-text"=>"20", "pdf"=>"11", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"13", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2012", "month"=>"8"}
  • {"unique-ip"=>"12", "full-text"=>"11", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2012", "month"=>"9"}
  • {"unique-ip"=>"24", "full-text"=>"30", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2012", "month"=>"10"}
  • {"unique-ip"=>"7", "full-text"=>"8", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2012", "month"=>"12"}
  • {"unique-ip"=>"24", "full-text"=>"28", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2013", "month"=>"1"}
  • {"unique-ip"=>"39", "full-text"=>"50", "pdf"=>"10", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2013", "month"=>"2"}
  • {"unique-ip"=>"59", "full-text"=>"94", "pdf"=>"13", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"21", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2013", "month"=>"3"}
  • {"unique-ip"=>"26", "full-text"=>"31", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"14", "cited-by"=>"0", "year"=>"2013", "month"=>"4"}
  • {"unique-ip"=>"41", "full-text"=>"48", "pdf"=>"10", "abstract"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2012", "month"=>"11"}
  • {"unique-ip"=>"83", "full-text"=>"133", "pdf"=>"18", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"5"}
  • {"unique-ip"=>"20", "full-text"=>"19", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"6"}
  • {"unique-ip"=>"19", "full-text"=>"21", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"17", "cited-by"=>"0", "year"=>"2013", "month"=>"7"}
  • {"unique-ip"=>"20", "full-text"=>"19", "pdf"=>"6", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"15", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"8"}
  • {"unique-ip"=>"19", "full-text"=>"19", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"17", "cited-by"=>"0", "year"=>"2013", "month"=>"9"}
  • {"unique-ip"=>"19", "full-text"=>"17", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"10"}
  • {"unique-ip"=>"25", "full-text"=>"37", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"11"}
  • {"unique-ip"=>"22", "full-text"=>"30", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2013", "month"=>"12"}
  • {"unique-ip"=>"23", "full-text"=>"26", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"16", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"1"}
  • {"unique-ip"=>"57", "full-text"=>"70", "pdf"=>"18", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2014", "month"=>"2"}
  • {"unique-ip"=>"55", "full-text"=>"71", "pdf"=>"19", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2014", "month"=>"3"}
  • {"unique-ip"=>"50", "full-text"=>"73", "pdf"=>"16", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"5"}
  • {"unique-ip"=>"34", "full-text"=>"40", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2014", "month"=>"6"}
  • {"unique-ip"=>"24", "full-text"=>"37", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"10", "cited-by"=>"0", "year"=>"2014", "month"=>"4"}
  • {"unique-ip"=>"86", "full-text"=>"125", "pdf"=>"16", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"26", "supp-data"=>"8", "cited-by"=>"0", "year"=>"2015", "month"=>"2"}
  • {"unique-ip"=>"26", "full-text"=>"27", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"7"}
  • {"unique-ip"=>"18", "full-text"=>"20", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2014", "month"=>"8"}
  • {"unique-ip"=>"34", "full-text"=>"38", "pdf"=>"14", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"12", "cited-by"=>"2", "year"=>"2014", "month"=>"9"}
  • {"unique-ip"=>"29", "full-text"=>"25", "pdf"=>"10", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2014", "month"=>"10"}
  • {"unique-ip"=>"38", "full-text"=>"41", "pdf"=>"11", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2014", "month"=>"11"}
  • {"unique-ip"=>"50", "full-text"=>"54", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2014", "month"=>"12"}
  • {"unique-ip"=>"87", "full-text"=>"104", "pdf"=>"24", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"6", "cited-by"=>"2", "year"=>"2015", "month"=>"1"}
  • {"unique-ip"=>"113", "full-text"=>"144", "pdf"=>"29", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"22", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2015", "month"=>"3"}
  • {"unique-ip"=>"88", "full-text"=>"101", "pdf"=>"18", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"15", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2015", "month"=>"4"}
  • {"unique-ip"=>"98", "full-text"=>"131", "pdf"=>"26", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2015", "month"=>"5"}
  • {"unique-ip"=>"68", "full-text"=>"86", "pdf"=>"23", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2015", "month"=>"6"}
  • {"unique-ip"=>"50", "full-text"=>"66", "pdf"=>"13", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"4", "cited-by"=>"2", "year"=>"2015", "month"=>"7"}
  • {"unique-ip"=>"51", "full-text"=>"60", "pdf"=>"15", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"8", "cited-by"=>"0", "year"=>"2015", "month"=>"8"}
  • {"unique-ip"=>"59", "full-text"=>"66", "pdf"=>"10", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2015", "month"=>"9"}
  • {"unique-ip"=>"56", "full-text"=>"60", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2015", "month"=>"10"}
  • {"unique-ip"=>"83", "full-text"=>"105", "pdf"=>"19", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2015", "month"=>"11"}
  • {"unique-ip"=>"64", "full-text"=>"71", "pdf"=>"19", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"5", "cited-by"=>"1", "year"=>"2015", "month"=>"12"}
  • {"unique-ip"=>"52", "full-text"=>"57", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"106", "full-text"=>"119", "pdf"=>"29", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"23", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"100", "full-text"=>"139", "pdf"=>"30", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"19", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2016", "month"=>"3"}
  • {"unique-ip"=>"60", "full-text"=>"75", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"7", "cited-by"=>"2", "year"=>"2016", "month"=>"4"}
  • {"unique-ip"=>"122", "full-text"=>"196", "pdf"=>"37", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"12", "cited-by"=>"2", "year"=>"2016", "month"=>"5"}
  • {"unique-ip"=>"36", "full-text"=>"51", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2016", "month"=>"7"}
  • {"unique-ip"=>"36", "full-text"=>"42", "pdf"=>"15", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"8"}
  • {"unique-ip"=>"48", "full-text"=>"51", "pdf"=>"14", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"13", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2016", "month"=>"9"}
  • {"unique-ip"=>"11", "full-text"=>"14", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"49", "full-text"=>"68", "pdf"=>"10", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"16", "supp-data"=>"30", "cited-by"=>"1", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"57", "full-text"=>"64", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
  • {"unique-ip"=>"22", "full-text"=>"27", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
  • {"unique-ip"=>"45", "full-text"=>"49", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2017", "month"=>"2"}
  • {"unique-ip"=>"35", "full-text"=>"41", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"8", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"28", "full-text"=>"32", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"15", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"36", "full-text"=>"41", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"20", "full-text"=>"23", "pdf"=>"10", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"17", "full-text"=>"22", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"8", "full-text"=>"12", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"28", "full-text"=>"35", "pdf"=>"12", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"15", "supp-data"=>"16", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"26", "full-text"=>"25", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"42", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}

Relative Metric

{"start_date"=>"2011-01-01T00:00:00Z", "end_date"=>"2011-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences", "average_usage"=>[304, 568, 702, 818, 927, 1027, 1118, 1206, 1285, 1357, 1427, 1500, 1564, 1636, 1705, 1773, 1840, 1909, 1974, 2039, 2106, 2170, 2234, 2296, 2358, 2423, 2484, 2546, 2606, 2673, 2734, 2795, 2857, 2921, 2984, 3046, 3100]}, {"subject_area"=>"/Biology and life sciences/Evolutionary biology", "average_usage"=>[330, 550, 674, 772, 863, 958, 1034, 1108, 1180, 1252, 1324, 1393, 1460, 1526, 1597, 1664, 1725, 1783, 1848, 1901, 1974, 2049, 2125, 2185, 2260, 2326, 2383, 2440, 2511, 2581, 2647, 2711, 2760, 2815, 2874, 2928, 3008]}, {"subject_area"=>"/Biology and life sciences/Microbiology", "average_usage"=>[313, 585, 721, 833, 946, 1049, 1147, 1230, 1307, 1383, 1462, 1528, 1592, 1667, 1726, 1794, 1857, 1918, 1993, 2070, 2137, 2194, 2258, 2314, 2370, 2432, 2497, 2555, 2619, 2676, 2741, 2801, 2861, 2914, 2971, 3017, 3072]}, {"subject_area"=>"/Biology and life sciences/Molecular biology", "average_usage"=>[295, 553, 688, 802, 914, 1017, 1108, 1194, 1278, 1351, 1419, 1500, 1570, 1633, 1712, 1774, 1839, 1903, 1970, 2033, 2101, 2162, 2228, 2291, 2352, 2418, 2486, 2547, 2610, 2680, 2737, 2799, 2859, 2919, 2974, 3029, 3082]}, {"subject_area"=>"/Biology and life sciences/Mycology", "average_usage"=>[330, 564, 723, 851, 962, 1064, 1145, 1232, 1331, 1386, 1446, 1540, 1589, 1706, 1779, 1864, 1945, 2015, 2066, 2138, 2184, 2251, 2303, 2352, 2438, 2485, 2576, 2685, 2798, 2848, 2905, 2960, 3040, 3125, 3181, 3258, 3319]}, {"subject_area"=>"/Biology and life sciences/Organisms", "average_usage"=>[316, 571, 699, 812, 915, 1008, 1095, 1180, 1255, 1319, 1393, 1461, 1528, 1595, 1662, 1729, 1802, 1868, 1937, 1997, 2062, 2130, 2192, 2254, 2324, 2386, 2450, 2510, 2579, 2642, 2716, 2778, 2842, 2908, 2979, 3042, 3095]}, {"subject_area"=>"/Medicine and health sciences", "average_usage"=>[303, 571, 709, 823, 937, 1038, 1133, 1216, 1298, 1370, 1447, 1518, 1588, 1656, 1725, 1790, 1856, 1926, 1992, 2054, 2118, 2182, 2242, 2301, 2363, 2425, 2484, 2544, 2602, 2662, 2716, 2776, 2841, 2901, 2960, 3016, 3071]}, {"subject_area"=>"/Medicine and health sciences/Pathology and laboratory medicine", "average_usage"=>[303, 579, 723, 839, 947, 1049, 1150, 1233, 1314, 1394, 1469, 1544, 1611, 1682, 1753, 1814, 1879, 1949, 2013, 2081, 2166, 2233, 2297, 2350, 2413, 2465, 2528, 2592, 2652, 2722, 2786, 2857, 2916, 2968, 3032, 3083, 3137]}]}
Loading … Spinner
There are currently no alerts