Using BLAST to Teach “E-value-tionary” Concepts
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{"title"=>"Using BLAST to teach \"E-value-tionary\" concepts", "type"=>"journal", "authors"=>[{"first_name"=>"Cheryl A.", "last_name"=>"Kerfeld", "scopus_author_id"=>"6701512374"}, {"first_name"=>"Kathleen M.", "last_name"=>"Scott", "scopus_author_id"=>"56870781000"}], "year"=>2011, "source"=>"PLoS Biology", "identifiers"=>{"sgr"=>"79952267766", "doi"=>"10.1371/journal.pbio.1001014", "isbn"=>"1545-7885 (Electronic)\\n1544-9173 (Linking)", "pmid"=>"21304918", "issn"=>"15449173", "scopus"=>"2-s2.0-79952267766", "pui"=>"361373958"}, "id"=>"f695c940-d3d6-3b94-9445-c7f8f7be02d6", "abstract"=>"BLAST (Basic Local Alignment Search Tool; 1,2) is the key bioinformatic tool for sequence comparison and retrieval from databases. BLAST is often the first step in using sequence-based information to design experiments and contextualize experimental results. Its speed and ease of use help account for this, with experiments requiring simply submitting a sequence of interest (the query sequence) and waiting a few seconds. At the same time, by rendering thinking unnecessary, BLAST is often used suboptimally, with many experienced researchers simply using the default parameters because they do not know how to manipulate them or accepting results with little understanding of their full meaning (or lack thereof).", "link"=>"http://www.mendeley.com/research/using-blast-teach-evaluetionary-concepts", "reader_count"=>217, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>26, "Librarian"=>1, "Student > Doctoral Student"=>8, "Researcher"=>58, "Student > Ph. D. Student"=>52, "Student > Postgraduate"=>12, "Student > Master"=>21, "Other"=>3, "Student > Bachelor"=>19, "Lecturer"=>4, "Lecturer > Senior Lecturer"=>2, "Professor"=>8}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>26, "Librarian"=>1, "Student > Doctoral Student"=>8, "Researcher"=>58, "Student > Ph. D. Student"=>52, "Student > Postgraduate"=>12, "Student > Master"=>21, "Other"=>3, "Student > Bachelor"=>19, "Lecturer"=>4, "Lecturer > Senior Lecturer"=>2, "Professor"=>8}, "reader_count_by_subject_area"=>{"Unspecified"=>10, "Agricultural and Biological Sciences"=>148, "Chemistry"=>4, "Computer Science"=>11, "Earth and Planetary Sciences"=>2, "Engineering"=>1, "Environmental Science"=>2, "Biochemistry, Genetics and Molecular Biology"=>21, "Medicine and Dentistry"=>5, "Neuroscience"=>1, "Sports and Recreations"=>2, "Physics and Astronomy"=>1, "Social Sciences"=>4, "Immunology and Microbiology"=>5}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>5}, "Social Sciences"=>{"Social Sciences"=>4}, "Sports and Recreations"=>{"Sports and Recreations"=>2}, "Physics and Astronomy"=>{"Physics and Astronomy"=>1}, "Unspecified"=>{"Unspecified"=>10}, "Environmental Science"=>{"Environmental Science"=>2}, "Engineering"=>{"Engineering"=>1}, "Chemistry"=>{"Chemistry"=>4}, "Neuroscience"=>{"Neuroscience"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>2}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>5}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>148}, "Computer Science"=>{"Computer Science"=>11}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>21}}, "reader_count_by_country"=>{"Argentina"=>2, "Hungary"=>1, "Hong Kong"=>1, "United States"=>14, "Philippines"=>1, "United Kingdom"=>7, "Portugal"=>1, "Switzerland"=>1, "Russia"=>1, "Spain"=>2, "Austria"=>1, "Netherlands"=>5, "Sweden"=>1, "Norway"=>1, "Brazil"=>4, "Mexico"=>2, "Australia"=>1, "France"=>1, "Chile"=>1, "Germany"=>1, "Croatia"=>1}, "group_count"=>3}

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Relative Metric

{"start_date"=>"2011-01-01T00:00:00Z", "end_date"=>"2011-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Physical sciences", "average_usage"=>[303, 547, 667, 770, 875, 974, 1062, 1140, 1210, 1276, 1344, 1408, 1473, 1534, 1602, 1665, 1732, 1800, 1863, 1920, 1984, 2048, 2099, 2161, 2222, 2285, 2341, 2404, 2473, 2528, 2595, 2650, 2713, 2772, 2835, 2886, 2938]}, {"subject_area"=>"/Physical sciences/Mathematics", "average_usage"=>[347, 582, 700, 805, 909, 997, 1061, 1147, 1220, 1282, 1350, 1411, 1471, 1532, 1600, 1665, 1726, 1790, 1868, 1927, 1986, 2048, 2105, 2166, 2229, 2288, 2347, 2407, 2463, 2525, 2589, 2650, 2704, 2755, 2806, 2854, 2896]}]}
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