Describing the Breakbone Fever: IDODEN, an Ontology for Dengue Fever
Publication Date
February 03, 2015
Journal
PLOS Neglected Tropical Diseases
Authors
Elvira Mitraka, Pantelis Topalis, Vicky Dritsou, Emmanuel Dialynas, et al
Volume
9
Issue
2
Pages
e0003479
DOI
https://dx.plos.org/10.1371/journal.pntd.0003479
Publisher URL
http://journals.plos.org/plosntds/article?id=10.1371%2Fjournal.pntd.0003479
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/25646954
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4315569
Europe PMC
http://europepmc.org/abstract/MED/25646954
Web of Science
000350992500028
Scopus
84924064459
Mendeley
http://www.mendeley.com/research/describing-breakbone-fever-idoden-ontology-dengue-fever
Events
Loading … Spinner

Mendeley | Further Information

{"title"=>"Describing the Breakbone Fever: IDODEN, an Ontology for Dengue Fever", "type"=>"journal", "authors"=>[{"first_name"=>"Elvira", "last_name"=>"Mitraka", "scopus_author_id"=>"35848782700"}, {"first_name"=>"Pantelis", "last_name"=>"Topalis", "scopus_author_id"=>"6603108226"}, {"first_name"=>"Vicky", "last_name"=>"Dritsou", "scopus_author_id"=>"25639571500"}, {"first_name"=>"Emmanuel", "last_name"=>"Dialynas", "scopus_author_id"=>"24921034100"}, {"first_name"=>"Christos", "last_name"=>"Louis", "scopus_author_id"=>"7103352753"}], "year"=>2015, "source"=>"PLoS Neglected Tropical Diseases", "identifiers"=>{"pmid"=>"25646954", "doi"=>"10.1371/journal.pntd.0003479", "sgr"=>"84924064459", "isbn"=>"1935-2735 (Electronic)\\r1935-2727 (Linking)", "scopus"=>"2-s2.0-84924064459", "issn"=>"19352735", "pui"=>"602601676"}, "id"=>"bcc75edb-a7f3-3c92-ac5e-3aa96ec30863", "abstract"=>"BACKGROUND: Ontologies represent powerful tools in information technology because they enhance interoperability and facilitate, among other things, the construction of optimized search engines. To address the need to expand the toolbox available for the control and prevention of vector-borne diseases we embarked on the construction of specific ontologies. We present here IDODEN, an ontology that describes dengue fever, one of the globally most important diseases that are transmitted by mosquitoes. METHODOLOGY/PRINCIPAL FINDINGS: We constructed IDODEN using open source software, and modeled it on IDOMAL, the malaria ontology developed previously. IDODEN covers all aspects of dengue fever, such as disease biology, epidemiology and clinical features. Moreover, it covers all facets of dengue entomology. IDODEN, which is freely available, can now be used for the annotation of dengue-related data and, in addition to its use for modeling, it can be utilized for the construction of other dedicated IT tools such as decision support systems. CONCLUSIONS/SIGNIFICANCE: The availability of the dengue ontology will enable databases hosting dengue-associated data and decision-support systems for that disease to perform most efficiently and to link their own data to those stored in other independent repositories, in an architecture- and software-independent manner.", "link"=>"http://www.mendeley.com/research/describing-breakbone-fever-idoden-ontology-dengue-fever", "reader_count"=>20, "reader_count_by_academic_status"=>{"Student > Doctoral Student"=>2, "Researcher"=>3, "Student > Ph. D. Student"=>4, "Student > Master"=>3, "Student > Bachelor"=>5, "Lecturer"=>1, "Professor"=>2}, "reader_count_by_user_role"=>{"Student > Doctoral Student"=>2, "Researcher"=>3, "Student > Ph. D. Student"=>4, "Student > Master"=>3, "Student > Bachelor"=>5, "Lecturer"=>1, "Professor"=>2}, "reader_count_by_subject_area"=>{"Engineering"=>1, "Biochemistry, Genetics and Molecular Biology"=>1, "Medicine and Dentistry"=>8, "Agricultural and Biological Sciences"=>4, "Arts and Humanities"=>1, "Veterinary Science and Veterinary Medicine"=>1, "Physics and Astronomy"=>1, "Social Sciences"=>2, "Computer Science"=>1}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>1}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>8}, "Social Sciences"=>{"Social Sciences"=>2}, "Physics and Astronomy"=>{"Physics and Astronomy"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>4}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Arts and Humanities"=>{"Arts and Humanities"=>1}, "Veterinary Science and Veterinary Medicine"=>{"Veterinary Science and Veterinary Medicine"=>1}}, "reader_count_by_country"=>{"Germany"=>1}, "group_count"=>3}

Scopus | Further Information

{"@_fa"=>"true", "link"=>[{"@_fa"=>"true", "@ref"=>"self", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84924064459"}, {"@_fa"=>"true", "@ref"=>"author-affiliation", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84924064459?field=author,affiliation"}, {"@_fa"=>"true", "@ref"=>"scopus", "@href"=>"https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84924064459&origin=inward"}, {"@_fa"=>"true", "@ref"=>"scopus-citedby", "@href"=>"https://www.scopus.com/inward/citedby.uri?partnerID=HzOxMe3b&scp=84924064459&origin=inward"}], "prism:url"=>"https://api.elsevier.com/content/abstract/scopus_id/84924064459", "dc:identifier"=>"SCOPUS_ID:84924064459", "eid"=>"2-s2.0-84924064459", "dc:title"=>"Describing the Breakbone Fever: IDODEN, an Ontology for Dengue Fever", "dc:creator"=>"Mitraka E.", "prism:publicationName"=>"PLoS Neglected Tropical Diseases", "prism:issn"=>"19352727", "prism:eIssn"=>"19352735", "prism:volume"=>"9", "prism:issueIdentifier"=>"2", "prism:pageRange"=>nil, "prism:coverDate"=>"2015-01-01", "prism:coverDisplayDate"=>"2015", "prism:doi"=>"10.1371/journal.pntd.0003479", "citedby-count"=>"5", "affiliation"=>[{"@_fa"=>"true", "affilname"=>"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas", "affiliation-city"=>"Heraklion", "affiliation-country"=>"Greece"}, {"@_fa"=>"true", "affilname"=>"Panepistimio Kritis", "affiliation-city"=>"Rethymnon", "affiliation-country"=>"Greece"}], "pubmed-id"=>"25646954", "prism:aggregationType"=>"Journal", "subtype"=>"ar", "subtypeDescription"=>"Article", "article-number"=>"e0003479", "source-id"=>"11900154404", "openaccess"=>"1", "openaccessFlag"=>true}

Facebook

  • {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fplosntds%2Farticle%3Fid%3D10.1371%252Fjournal.pntd.0003479", "share_count"=>2, "like_count"=>2, "comment_count"=>0, "click_count"=>0, "total_count"=>4}

Counter

  • {"month"=>"2", "year"=>"2015", "pdf_views"=>"55", "xml_views"=>"9", "html_views"=>"1206"}
  • {"month"=>"3", "year"=>"2015", "pdf_views"=>"11", "xml_views"=>"2", "html_views"=>"96"}
  • {"month"=>"4", "year"=>"2015", "pdf_views"=>"13", "xml_views"=>"1", "html_views"=>"49"}
  • {"month"=>"5", "year"=>"2015", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"30"}
  • {"month"=>"6", "year"=>"2015", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"23"}
  • {"month"=>"7", "year"=>"2015", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"25"}
  • {"month"=>"8", "year"=>"2015", "pdf_views"=>"1", "xml_views"=>"1", "html_views"=>"21"}
  • {"month"=>"9", "year"=>"2015", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"26"}
  • {"month"=>"10", "year"=>"2015", "pdf_views"=>"5", "xml_views"=>"1", "html_views"=>"26"}
  • {"month"=>"11", "year"=>"2015", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"23"}
  • {"month"=>"12", "year"=>"2015", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"20"}
  • {"month"=>"1", "year"=>"2016", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"16"}
  • {"month"=>"2", "year"=>"2016", "pdf_views"=>"4", "xml_views"=>"1", "html_views"=>"19"}
  • {"month"=>"3", "year"=>"2016", "pdf_views"=>"0", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"4", "year"=>"2016", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"34"}
  • {"month"=>"5", "year"=>"2016", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"6", "year"=>"2016", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"27"}
  • {"month"=>"7", "year"=>"2016", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"8", "year"=>"2016", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"9", "year"=>"2016", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"19"}
  • {"month"=>"10", "year"=>"2016", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"11", "year"=>"2016", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"27"}
  • {"month"=>"12", "year"=>"2016", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"1", "year"=>"2017", "pdf_views"=>"0", "xml_views"=>"1", "html_views"=>"13"}
  • {"month"=>"2", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"26"}
  • {"month"=>"3", "year"=>"2017", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"32"}
  • {"month"=>"4", "year"=>"2017", "pdf_views"=>"2", "xml_views"=>"2", "html_views"=>"19"}
  • {"month"=>"5", "year"=>"2017", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"16"}
  • {"month"=>"6", "year"=>"2017", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"17"}
  • {"month"=>"7", "year"=>"2017", "pdf_views"=>"1", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"8", "year"=>"2017", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"10"}
  • {"month"=>"9", "year"=>"2017", "pdf_views"=>"1", "xml_views"=>"1", "html_views"=>"7"}
  • {"month"=>"10", "year"=>"2017", "pdf_views"=>"9", "xml_views"=>"1", "html_views"=>"32"}
  • {"month"=>"11", "year"=>"2017", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"17"}
  • {"month"=>"12", "year"=>"2017", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"1", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"9"}
  • {"month"=>"2", "year"=>"2018", "pdf_views"=>"3", "xml_views"=>"1", "html_views"=>"9"}
  • {"month"=>"3", "year"=>"2018", "pdf_views"=>"1", "xml_views"=>"0", "html_views"=>"8"}
  • {"month"=>"4", "year"=>"2018", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"5", "year"=>"2018", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"8"}
  • {"month"=>"6", "year"=>"2018", "pdf_views"=>"3", "xml_views"=>"2", "html_views"=>"4"}
  • {"month"=>"7", "year"=>"2018", "pdf_views"=>"3", "xml_views"=>"3", "html_views"=>"5"}
  • {"month"=>"8", "year"=>"2018", "pdf_views"=>"4", "xml_views"=>"1", "html_views"=>"16"}
  • {"month"=>"9", "year"=>"2018", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"7"}
  • {"month"=>"10", "year"=>"2018", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"8"}
  • {"month"=>"11", "year"=>"2018", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"4"}
  • {"month"=>"12", "year"=>"2018", "pdf_views"=>"1", "xml_views"=>"1", "html_views"=>"6"}
  • {"month"=>"1", "year"=>"2019", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"2", "year"=>"2019", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"5"}
  • {"month"=>"3", "year"=>"2019", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"11"}
  • {"month"=>"4", "year"=>"2019", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"7"}
  • {"month"=>"5", "year"=>"2019", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"13"}
  • {"month"=>"6", "year"=>"2019", "pdf_views"=>"10", "xml_views"=>"0", "html_views"=>"8"}
  • {"month"=>"7", "year"=>"2019", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"8", "year"=>"2019", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"9"}
  • {"month"=>"9", "year"=>"2019", "pdf_views"=>"1", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"10", "year"=>"2019", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"10"}
  • {"month"=>"11", "year"=>"2019", "pdf_views"=>"1", "xml_views"=>"0", "html_views"=>"11"}
  • {"month"=>"12", "year"=>"2019", "pdf_views"=>"10", "xml_views"=>"0", "html_views"=>"7"}
  • {"month"=>"1", "year"=>"2020", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"9"}
  • {"month"=>"2", "year"=>"2020", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"9"}
  • {"month"=>"3", "year"=>"2020", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"10"}
  • {"month"=>"4", "year"=>"2020", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"7"}
  • {"month"=>"5", "year"=>"2020", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"8"}
  • {"month"=>"6", "year"=>"2020", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"2"}
  • {"month"=>"7", "year"=>"2020", "pdf_views"=>"0", "xml_views"=>"0", "html_views"=>"8"}
  • {"month"=>"8", "year"=>"2020", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"6"}
  • {"month"=>"9", "year"=>"2020", "pdf_views"=>"1", "xml_views"=>"0", "html_views"=>"4"}

Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1879632"], "description"=>"<p>Given the different relations linking the terms, we have used a non-hierarchical way of showing the vaccine calls and its children/related terms. The colours of the arrows indicate different relations.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300672, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g005", "stats"=>{"downloads"=>0, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_class_vaccine_in_IDODEN_/1300672", "title"=>"The class “<i>vaccine</i>” in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879630"], "description"=>"<p>Only terms relating to the diagnosis of dengue fever are shown. Font colours indicate the different levels of the hierarchy while a small yellow box in front of a term shows that it has children. The minus sign indicates that all child terms are listed while the plus sign indicates the presence of children terms that are not shown in the Figure.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300670, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g003", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_classes_process_of_dengue_fever_A_and_object_aggregate_B_in_IDODEN_/1300670", "title"=>"The classes “<i>process of dengue fever</i>” (A) and “<i>object</i> aggregate” (B) in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879638"], "description"=>"<p>Definitions of the key players of dengue fever.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300678, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.t003", "stats"=>{"downloads"=>5, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Definitions_of_the_key_players_of_dengue_fever_/1300678", "title"=>"Definitions of the key players of dengue fever.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879635"], "description"=>"<p>The arrows show the different relations linking the ontology terms; the colours indicate different relations as listed at the lower right corner of the model. Ontologies and terms in italics show classes that have been imported from ontologies other than IDODEN. The dashed green line denotes an “exact synonym relationship” between <i>Aedes aegypti</i> and <i>Stegomyia fasciata</i>, the term used for the former species in 1928. Several terms have been omitted from the model.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300675, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g008", "stats"=>{"downloads"=>0, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ontological_model_of_the_1927_8211_1928_dengue_fever_epidemic_in_Athens_/1300675", "title"=>"Ontological model of the 1927–1928 dengue fever epidemic in Athens.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879634"], "description"=>"<p>The arrows show the different relations linking the ontology terms; the colours indicate different relations as listed at the upper right corner of the model. Ontologies and terms in italics show classes that have been imported from ontologies other than IDODEN. Several terms have been omitted from the model.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300674, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g007", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ontological_model_of_a_dengue_fever_infection_/1300674", "title"=>"Ontological model of a dengue fever infection.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879629"], "description"=>"<p>Font colours indicate the different levels of the hierarchy while a small yellow box in front of a term shows that it has children. The minus sign indicates that all child terms are listed while the plus sign indicates the presence of child terms that are not shown in the Figure.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300669, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g002", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_8220_disposition_hierarchy_of_terms_in_IDODEN_/1300669", "title"=>"The <i>“disposition</i>” hierarchy of terms in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879628"], "description"=>"<p>Font colours indicate the different levels of the hierarchy while a small yellow box in front of a term shows that it has children. The minus sign indicates that all child terms are listed.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300668, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_8220_data_item_hierarchy_of_terms_in_IDODEN_/1300668", "title"=>"The <i>“data item</i>” hierarchy of terms in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879637"], "description"=>"<p>One randomly picked example is listed for each one of them.</p><p>The relation “<i>located_in</i>”, used in <a href=\"http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003479#pntd.0003479.g008\" target=\"_blank\">Fig. 8</a> is used by the GAZ ontology and not IDODEN.</p><p>The Table lists all relations used in IDODEN.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300677, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.t002", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_Table_lists_all_relations_used_in_IDODEN_/1300677", "title"=>"The Table lists all relations used in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879636"], "description"=>"<p>All of these ontologies and controlled vocabularies are available through the NCBO Bioportal (<a href=\"http://bioportal.bioontology.org/ontologies\" target=\"_blank\">http://bioportal.bioontology.org/ontologies</a>).</p><p>List of the ontologies and controlled vocabularies from which terms were borrowed and imported into IDODEN, as well as the number of these terms.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300676, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.t001", "stats"=>{"downloads"=>3, "page_views"=>2, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_List_of_the_ontologies_and_controlled_vocabularies_from_which_terms_were_borrowed_and_imported_into_IDODEN_as_well_as_the_number_of_these_terms_/1300676", "title"=>"List of the ontologies and controlled vocabularies from which terms were borrowed and imported into IDODEN, as well as the number of these terms.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879633"], "description"=>"<p>The arrows show the different relations linking the ontology terms; the colours indicate different relations as listed above the model. Ontologies and terms in italics show classes that have been imported from ontologies other than IDODEN. Several terms have been omitted from the model.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300673, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g006", "stats"=>{"downloads"=>1, "page_views"=>19, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ontological_model_of_miRNA_mediated_regulation_of_Dengue_virus_infection_/1300673", "title"=>"Ontological model of miRNA-mediated regulation of Dengue virus infection.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1879631"], "description"=>"<p>All terms shown are children of “role”. With the exception of the terms that are not preceded by a small yellow box all have children that are not shown. The arrow denotes that the terms in the right column follow those in the left one.</p>", "links"=>[], "tags"=>["IDOMAL", "optimized search engines", "IDODEN", "tool", "construction", "ontology", "data", "Dengue Fever BackgroundOntologies", "Dengue fever"], "article_id"=>1300671, "categories"=>["Uncategorised"], "users"=>["Elvira Mitraka", "Pantelis Topalis", "Vicky Dritsou", "Emmanuel Dialynas", "Christos Louis"], "doi"=>"https://dx.doi.org/10.1371/journal.pntd.0003479.g004", "stats"=>{"downloads"=>0, "page_views"=>18, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_complete_class_role_in_IDODEN_/1300671", "title"=>"The complete class “<i>role</i>” in IDODEN.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-02-03 03:20:36"}

PMC Usage Stats | Further Information

  • {"unique-ip"=>"11", "full-text"=>"11", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"2"}
  • {"unique-ip"=>"26", "full-text"=>"23", "pdf"=>"14", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"3"}
  • {"unique-ip"=>"20", "full-text"=>"23", "pdf"=>"15", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"4"}
  • {"unique-ip"=>"13", "full-text"=>"18", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"5"}
  • {"unique-ip"=>"14", "full-text"=>"9", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"6"}
  • {"unique-ip"=>"80", "full-text"=>"83", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"7"}
  • {"unique-ip"=>"16", "full-text"=>"15", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"8"}
  • {"unique-ip"=>"14", "full-text"=>"14", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"9"}
  • {"unique-ip"=>"14", "full-text"=>"13", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2015", "month"=>"10"}
  • {"unique-ip"=>"15", "full-text"=>"11", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"11"}
  • {"unique-ip"=>"16", "full-text"=>"18", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
  • {"unique-ip"=>"11", "full-text"=>"10", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"4", "full-text"=>"5", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"3"}
  • {"unique-ip"=>"10", "full-text"=>"7", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"4"}
  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"5"}
  • {"unique-ip"=>"16", "full-text"=>"11", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"6"}
  • {"unique-ip"=>"12", "full-text"=>"13", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
  • {"unique-ip"=>"10", "full-text"=>"9", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"8"}
  • {"unique-ip"=>"15", "full-text"=>"13", "pdf"=>"13", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"9"}
  • {"unique-ip"=>"10", "full-text"=>"9", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"7", "full-text"=>"7", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
  • {"unique-ip"=>"4", "full-text"=>"1", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
  • {"unique-ip"=>"13", "full-text"=>"17", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"2"}
  • {"unique-ip"=>"4", "full-text"=>"14", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"3", "full-text"=>"1", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"6", "full-text"=>"7", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"6", "full-text"=>"7", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"16", "full-text"=>"19", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}
  • {"unique-ip"=>"14", "full-text"=>"18", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"9", "full-text"=>"16", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"12"}
  • {"unique-ip"=>"7", "full-text"=>"8", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"3"}
  • {"unique-ip"=>"6", "full-text"=>"18", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"1"}
  • {"unique-ip"=>"6", "full-text"=>"4", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
  • {"unique-ip"=>"10", "full-text"=>"8", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
  • {"unique-ip"=>"7", "full-text"=>"6", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"9"}
  • {"unique-ip"=>"7", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
  • {"unique-ip"=>"7", "full-text"=>"10", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"11"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"7", "full-text"=>"8", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}
  • {"unique-ip"=>"10", "full-text"=>"19", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"8"}
  • {"unique-ip"=>"12", "full-text"=>"9", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"9"}
  • {"unique-ip"=>"9", "full-text"=>"9", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"10"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"12"}
  • {"unique-ip"=>"6", "full-text"=>"6", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"2"}
  • {"unique-ip"=>"7", "full-text"=>"6", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"3"}
  • {"unique-ip"=>"13", "full-text"=>"15", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"4"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"5"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"6"}
  • {"unique-ip"=>"6", "full-text"=>"8", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"7"}
  • {"unique-ip"=>"5", "full-text"=>"7", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"8"}
  • {"unique-ip"=>"4", "full-text"=>"3", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"9"}

Relative Metric

{"start_date"=>"2015-01-01T00:00:00Z", "end_date"=>"2015-12-31T00:00:00Z", "subject_areas"=>[]}
Loading … Spinner
There are currently no alerts