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{"title"=>"From offshore to onshore: Multiple origins of shallow-water corals from deep-dea ancestors", "type"=>"journal", "authors"=>[{"first_name"=>"Alberto", "last_name"=>"Lindner", "scopus_author_id"=>"24332108100"}, {"first_name"=>"Stephen D.", "last_name"=>"Cairns", "scopus_author_id"=>"7004928707"}, {"first_name"=>"Clifford W.", "last_name"=>"Cunningham", "scopus_author_id"=>"7201736220"}], "year"=>2008, "source"=>"PLoS ONE", "identifiers"=>{"pui"=>"352133897", "sgr"=>"49149126964", "issn"=>"19326203", "pmid"=>"18560569", "scopus"=>"2-s2.0-49149126964", "doi"=>"10.1371/journal.pone.0002429", "isbn"=>"1932-6203"}, "id"=>"f0c4ca2f-4426-3b49-9107-d911b3766d1f", "abstract"=>"Shallow-water tropical reefs and the deep sea represent the two most diverse marine environments. Understanding the origin and diversification of this biodiversity is a major quest in ecology and evolution. The most prominent and well-supported explanation, articulated since the first explorations of the deep sea, holds that benthic marine fauna originated in shallow, onshore environments, and diversified into deeper waters. In contrast, evidence that groups of marine organisms originated in the deep sea is limited, and the possibility that deep-water taxa have contributed to the formation of shallow-water communities remains untested with phylogenetic methods. Here we show that stylasterid corals (Cnidaria: Hydrozoa: Stylasteridae)--the second most diverse group of hard corals--originated and diversified extensively in the deep sea, and subsequently invaded shallow waters. Our phylogenetic results show that deep-water stylasterid corals have invaded the shallow-water tropics three times, with one additional invasion of the shallow-water temperate zone. Our results also show that anti-predatory innovations arose in the deep sea, but were not involved in the shallow-water invasions. These findings are the first robust evidence that an important group of tropical shallow-water marine animals evolved from deep-water ancestors.", "link"=>"http://www.mendeley.com/research/offshore-onshore-multiple-origins-shallowwater-corals-deepdea-ancestors", "reader_count"=>171, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>10, "Librarian"=>2, "Researcher"=>47, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>47, "Student > Postgraduate"=>7, "Student > Master"=>28, "Other"=>3, "Student > Bachelor"=>10, "Lecturer"=>1, "Professor"=>9}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>10, "Librarian"=>2, "Researcher"=>47, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>47, "Student > Postgraduate"=>7, "Student > Master"=>28, "Other"=>3, "Student > Bachelor"=>10, "Lecturer"=>1, "Professor"=>9}, "reader_count_by_subject_area"=>{"Unspecified"=>6, "Engineering"=>2, "Environmental Science"=>22, "Biochemistry, Genetics and Molecular Biology"=>4, "Agricultural and Biological Sciences"=>117, "Neuroscience"=>1, "Decision Sciences"=>1, "Earth and Planetary Sciences"=>18}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>2}, "Neuroscience"=>{"Neuroscience"=>1}, "Decision Sciences"=>{"Decision Sciences"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>18}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>117}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>4}, "Unspecified"=>{"Unspecified"=>6}, "Environmental Science"=>{"Environmental Science"=>22}}, "reader_count_by_country"=>{"Argentina"=>3, "United States"=>5, "Brazil"=>7, "Mexico"=>3, "United Kingdom"=>4, "South Africa"=>1, "Ghana"=>1, "France"=>1, "Kenya"=>1, "Portugal"=>1, "Germany"=>3, "Spain"=>1}, "group_count"=>6}

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• {"id"=>"333813041844068353", "text"=>"#PLOSONE: From Offshore to Onshore: Multiple Origins of Shallow-Water Corals from Deep-Sea Ancestors by Steve Cairns http://t.co/GkW2ubjnxG", "created_at"=>"2013-05-13T05:16:45Z", "user"=>"InvertebratesDC", "user_name"=>"NMNH Invert Zoology", "user_profile_image"=>"http://a0.twimg.com/profile_images/1766776497/Nemertea_Basiodiscus_mexicanus_normal.png"}
• {"id"=>"345258005362782208", "text"=>"#PLOSONE:#openaccess From Offshore to Onshore: Multiple Origins of Shallow-Water Corals from Deep-Sea Ancestors http://t.co/GkW2ubjnxG", "created_at"=>"2013-06-13T19:14:57Z", "user"=>"InvertebratesDC", "user_name"=>"NMNH Invert Zoology", "user_profile_image"=>"http://a0.twimg.com/profile_images/1766776497/Nemertea_Basiodiscus_mexicanus_normal.png"}

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Figshare

• {"files"=>["https://ndownloader.figshare.com/files/927781"], "description"=>"<p>(A) Tropical Indo-West Pacific species of <i>Distichopora</i>. (B) Tropical Eastern Pacific species <i>Distichopora robusta</i>. (C) Circumtropical species of <i>Stylaster</i>. (D) Temperate North Pacific species <i>Stylantheca petrograpta</i> and <i>Stylaster californicus.</i> Remaining stylasterid species are deep-sea dwellers. The tree was estimated by maximum likelihood (ML) using a 2638 bp DNA dataset (−ln likelihood 25390.87513). Character state reconstructions estimate the ancestral environment of stylasterid corals as deep water (probabilities of 0.98 and 0.97 using Mk1 and AsymmMk models, respectively <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0002429#pone.0002429-Maddison1\" target=\"_blank\">[43]</a>). The hypothesis of a single invasion of shallow waters is rejected (p<0.001, Shimodaira-Hasegawa test <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0002429#pone.0002429-Shimodaira1\" target=\"_blank\">[46]</a>). Nodes marked with red circles are calibrated using the earliest stylasterid fossils, 65 mya. Numbers are Bayesian posterior probabilities whenever >90%; dots at nodes indicate bootstrap support values whenever >70% for both parsimony and maximum likelihood. Images courtesy of B Hoeksema (A), SD Cairns (B), PMS Peres (C), R Morse (D).</p>", "links"=>[], "tags"=>["relationships", "stylasterid", "corals", "invasions"], "article_id"=>598233, "categories"=>["Evolutionary Biology"], "users"=>["Alberto Lindner", "Stephen D. Cairns", "Clifford W. Cunningham"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0002429.g002", "stats"=>{"downloads"=>4, "page_views"=>27, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_relationships_of_stylasterid_corals_and_multiple_invasions_of_shallow_waters_/598233", "title"=>"Phylogenetic relationships of stylasterid corals and multiple invasions of shallow waters.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2008-06-18 02:17:13"}
• {"files"=>["https://ndownloader.figshare.com/files/457928", "https://ndownloader.figshare.com/files/458031"], "description"=>"<div><p>Shallow-water tropical reefs and the deep sea represent the two most diverse marine environments. Understanding the origin and diversification of this biodiversity is a major quest in ecology and evolution. The most prominent and well-supported explanation, articulated since the first explorations of the deep sea, holds that benthic marine fauna originated in shallow, onshore environments, and diversified into deeper waters. In contrast, evidence that groups of marine organisms originated in the deep sea is limited, and the possibility that deep-water taxa have contributed to the formation of shallow-water communities remains untested with phylogenetic methods. Here we show that stylasterid corals (Cnidaria: Hydrozoa: Stylasteridae)—the second most diverse group of hard corals—originated and diversified extensively in the deep sea, and subsequently invaded shallow waters. Our phylogenetic results show that deep-water stylasterid corals have invaded the shallow-water tropics three times, with one additional invasion of the shallow-water temperate zone. Our results also show that anti-predatory innovations arose in the deep sea, but were not involved in the shallow-water invasions. These findings are the first robust evidence that an important group of tropical shallow-water marine animals evolved from deep-water ancestors.</p></div>", "links"=>[], "tags"=>["offshore", "origins", "shallow-water", "corals", "deep-sea", "ancestors"], "article_id"=>150203, "categories"=>["Evolutionary Biology"], "users"=>["Alberto Lindner", "Stephen D. Cairns", "Clifford W. Cunningham"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0002429.s001", "https://dx.doi.org/10.1371/journal.pone.0002429.s002"], "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/From_Offshore_to_Onshore_Multiple_Origins_of_Shallow_Water_Corals_from_Deep_Sea_Ancestors/150203", "title"=>"From Offshore to Onshore: Multiple Origins of Shallow-Water Corals from Deep-Sea Ancestors", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2008-06-18 00:03:23"}
• {"files"=>["https://ndownloader.figshare.com/files/927701"], "description"=>"<p>(A) The shallow-water California hydrocoral <i>Stylaster californicus</i>, United States of America. (B) Tropical shallow-water species of <i>Distichopora</i>, Papua New Guinea. (C) Deep-water species of <i>Stylaster</i>, 536 meters depth, St. Lucia. Images courtesy of R Morse (A), M Baine (B), JK Reed (C).</p>", "links"=>[], "tags"=>["Evolutionary biology"], "article_id"=>598156, "categories"=>["Evolutionary Biology"], "users"=>["Alberto Lindner", "Stephen D. Cairns", "Clifford W. Cunningham"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0002429.g001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Stylasterid_corals_/598156", "title"=>"Stylasterid corals.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2008-06-18 02:15:56"}
• {"files"=>["https://ndownloader.figshare.com/files/927882"], "description"=>"<p>Stylasterid corals are among the most important habitat-forming invertebrates in deep-sea coral ecosystems in the North Pacific <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0002429#pone.0002429-Stone1\" target=\"_blank\">[24]</a>. Photo by Alberto Lindner/NOAA.</p>", "links"=>[], "tags"=>["benthic", "adak", "stylasterid", "corals", "genus", "150"], "article_id"=>598335, "categories"=>["Evolutionary Biology"], "users"=>["Alberto Lindner", "Stephen D. Cairns", "Clifford W. Cunningham"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0002429.g003", "stats"=>{"downloads"=>1, "page_views"=>17, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Diverse_benthic_habitat_off_Adak_Island_Alaska_showing_sponges_hydroids_and_stylasterid_corals_of_the_genus_Stylaster_at_a_depth_of_150_meters_/598335", "title"=>"Diverse benthic habitat off Adak Island, Alaska, showing sponges, hydroids, and stylasterid corals of the genus <i>Stylaster</i> at a depth of 150 meters.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2008-06-18 02:18:55"}

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Relative Metric

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F1000Prime