The bHLH Transcription Factor, Hairy, Refines the Terminal Cell Fate in the Drosophila Embryonic Trachea
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{"title"=>"The bHLH transcription factor, hairy, refines the terminal cell fate in the drosophila embryonic trachea", "type"=>"journal", "authors"=>[{"first_name"=>"Yaoyao", "last_name"=>"Zhan", "scopus_author_id"=>"36998126100"}, {"first_name"=>"Saw W.", "last_name"=>"Maung", "scopus_author_id"=>"36997969100"}, {"first_name"=>"Bing", "last_name"=>"Shao", "scopus_author_id"=>"36997997800"}, {"first_name"=>"Monn Monn", "last_name"=>"Myat", "scopus_author_id"=>"6603262058"}], "year"=>2010, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-78649791793", "sgr"=>"78649791793", "pui"=>"360095066", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "pmid"=>"21152432", "doi"=>"10.1371/journal.pone.0014134"}, "id"=>"46cf6c56-e934-3584-a5df-e5385799d5c4", "abstract"=>"The pair-rule gene, hairy, encodes a basic helix-loop-helix transcription factor and is required for patterning of the early Drosophila embryo and for morphogenesis of the embryonic salivary gland. Although hairy was shown to be expressed in the tracheal primordia and in surrounding mesoderm, whether hairy plays a role in tracheal development is not known.", "link"=>"http://www.mendeley.com/research/bhlh-transcription-factor-hairy-refines-terminal-cell-fate-drosophila-embryonic-trachea", "reader_count"=>19, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Student > Doctoral Student"=>1, "Researcher"=>7, "Student > Ph. D. Student"=>9, "Other"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Student > Doctoral Student"=>1, "Researcher"=>7, "Student > Ph. D. Student"=>9, "Other"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>1, "Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>15, "Medicine and Dentistry"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>15}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Unspecified"=>{"Unspecified"=>1}}, "reader_count_by_country"=>{"United States"=>1}, "group_count"=>1}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/816189"], "description"=>"<p>Lateral trunks of wild-type embryos (A) contain approximately five terminal cells (TCs) whereas lateral trunks of trachea expressing activated breathless (<i>btl<sup>ACT</sup></i>) with <i>btl</i>-GAL4 (B) and <i>btl<sup>ACT</sup></i> expressing trachea of <i>h<sup>22</sup></i> heterozygous embryos (C) contain more TCs in the lateral trunk branches. Graph shows Hairy-dependent increase in TC specification by activated Btl in metameres 2–9; n represents number of embryos scored (D). In <i>h<sup>674</sup></i> heterozygous embryos (E), each dorsal branch has two cells expressing <i>btl</i> RNA whereas in homozygous siblings (F), each dorsal branch has two or more cells expressing <i>btl</i> RNA. Embryos in A–C were stained for DSRF (red), Piopio (blue) to label the tracheal lumen and β-gal (not shown). Panels A–C are lateral views of projected confocal images. Embryos in E and F were hybridized <i>in situ</i> for <i>btl</i> RNA (purple) and <i>trachealess</i> RNA (pink). Scale bar in A represents 20 µm.</p>", "links"=>[], "tags"=>["specification", "activated", "breathless", "enhanced"], "article_id"=>486555, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g006", "stats"=>{"downloads"=>1, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Terminal_cell_specification_by_activated_breathless_is_enhanced_by_loss_of_hairy_/486555", "title"=>"Terminal cell specification by activated breathless is enhanced by loss of hairy.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:09:45"}
  • {"files"=>["https://ndownloader.figshare.com/files/816042"], "description"=>"<p>In WT embryos (A), a single TC is specified in each dorsal branch (A, arrows), whereas dorsal branches of <i>pnt<sup>Δ88</sup></i> homozygous embryos lack TCs (*, B). In embryos overexpressing wild-type <i>pnt</i> in the entire trachea with <i>btl</i>-GAL4 (C), extra TCs are specified in all tracheal branches (C, arrows), including the dorsal trunk (C, arrowhead). Dorsal branches of embryos homozygous for both <i>h<sup>674</sup></i> and <i>pn<sup>Δ88</sup></i> lack TCs (*, D). (E) Graph shows number of TCs per dorsal branch in metameres 2–9 in WT, <i>h<sup>674</sup></i> and <i>pnt<sup>Δ88</sup></i> mutant embryos; n represents number of embryos scored. (F) Graph shows percentage of dorsal branches with various numbers of <i>pnt</i> RNA expressing cells; n represents number of embryos scored. <i>h<sup>674</sup></i> heterozygous embryos (G) have a single dorsal branch cell expressing <i>pnt</i> RNA (G), whereas homozygous siblings have extra dorsal branch cells expressing <i>pnt</i> RNA (H). Embryos shown in panels A–D were stained for DSRF (red), 2A12 (green) and β-gal (not shown). Embryos shown in G and H were hybridized <i>in situ</i> for <i>pnt</i> RNA (purple) and <i>lac-Z</i> (not shown). Scale bar in A represents 20 µm.</p>", "links"=>[], "tags"=>["epistatic", "hairy", "terminal"], "article_id"=>486409, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g005", "stats"=>{"downloads"=>1, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Pointed_is_epistatic_to_Hairy_in_terminal_cell_specification_/486409", "title"=>"Pointed is epistatic to Hairy in terminal cell specification.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:08:54"}
  • {"files"=>["https://ndownloader.figshare.com/files/815705"], "description"=>"<p>In wild-type embryos (A), invaginating tracheal cells form a finger-like structure. In some <i>h<sup>674</sup></i> mutant embryos (B), invaginating tracheal cells form a finger-like structure, whereas in other mutant embryos (C), one end of the structure was widened (C, arrowhead). Embryos in A–C were stained for Crb and β-gal (not shown). All panels of embryos are lateral views. Scale bar in A represents 5 µm.</p>", "links"=>[], "tags"=>["developmental biology/embryology", "developmental biology/morphogenesis and cell biology", "developmental biology/organogenesis"], "article_id"=>486071, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g003", "stats"=>{"downloads"=>1, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hairy_is_required_for_proper_invagination_/486071", "title"=>"Hairy is required for proper invagination.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:07:11"}
  • {"files"=>["https://ndownloader.figshare.com/files/816310"], "description"=>"<p>Graph shows number of DSRF-labeled terminal cells per dorsal branch in metameres two to nine of wild-type, <i>hairy</i> and <i>bnl</i> mutant embryos. Between 36 and 106 terminal branches were scored for the various genotypes.</p>", "links"=>[], "tags"=>["functions", "genetically", "interacts", "refine", "terminal"], "article_id"=>486673, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g007", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_hairy_functions_in_the_muscle_and_genetically_interacts_with_bnl_to_refine_the_terminal_cell_fate_/486673", "title"=>"<i>hairy</i> functions in the muscle and genetically interacts with <i>bnl</i> to refine the terminal cell fate.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:10:22"}
  • {"files"=>["https://ndownloader.figshare.com/files/816393"], "description"=>"<p>In <i>h<sup>674</sup></i> heterozygous embryos (A), <i>bnl</i> RNA is expressed in clusters close to the tracheal visceral branch (vis) (A, large arrows), in dorsal clusters (dor) (A, small arrowheads) and in lateral clusters (lat) (A, large arrowhead). In <i>h<sup>674</sup></i> homozygous embryos (B), the dorsal clusters of <i>bnl</i> RNA are expanded (B, small arrowheads). In <i>h<sup>47</sup></i> homozygous embryos (C and D), clusters of <i>bnl</i> RNA close to the tracheal visceral branch (vis) (C, large arrow) and dorsal clusters (dor) (D, small arrowheads) are expanded. In wild-type embryos (E and E'), a cluster of <i>bnl</i> expression is found close to the tracheal ganglionic branch (gan) (E and E', small arrows). In <i>h<sup>ACT</sup></i> embryos (F and G), <i>bnl</i> RNA close to the tracheal visceral branch (vis) (F, large arrows) and close to the ganglionic branch (gan) (G, small arrows) are expanded. All embryos shown are at stage 13 and were processed for ISH for <i>bnl</i> RNA and <i>lac-Z</i> to distinguish <i>h<sup>674</sup></i> heterozygous from homozygous embryos. Embryos in panels A and B are lateral views whereas embryos in panels C–G are ventral-lateral views. Panel E' is a more internal focal plane than that shown in panel E.</p>", "links"=>[], "tags"=>["mutant"], "article_id"=>486768, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g008", "stats"=>{"downloads"=>1, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ectopic_expression_of_bnl_in_hairy_mutant_embryos_/486768", "title"=>"Ectopic expression of <i>bnl</i> in <i>hairy</i> mutant embryos.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:10:55"}
  • {"files"=>["https://ndownloader.figshare.com/files/815802"], "description"=>"<p>In WT embryos (A), a single terminal cell (TC) is specified at the tip of each dorsal branch (A, arrows). In <i>h<sup>674</sup></i> (B), <i>h<sup>47</sup></i> (C) and <i>h<sup>ACT</sup></i> (D) mutant embryos and embryos <i>trans</i>-heterozygous for <i>h<sup>674</sup></i> and <i>h<sup>47</sup></i> (E), two or more TCs are specified per dorsal branch (B, C, D and E, arrows). In <i>h<sup>674</sup></i> homozygous embryos that are also heterozygous for <i>bnl<sup>P1</sup></i>(F), some DBs have a TC (F, arrows) whereas other DBs are missing TCs (F, arrowheads). Extra terminal cells are specified in lateral trunks of <i>h<sup>47</sup></i> homozygous embryos compared to heterozygous siblings (G and H, arrows). Embryos in A–F are at stage 16 and embryos in G and H are at stage 15. All embryos were stained for DSRF (red) to label TCs and 2A12 (green) to label the tracheal lumen. Panels A–E show projections of confocal sections of dorsal view embryos whereas those of G and H are projections of lateral view embryos. Scale bar in A represents 20 µm.</p>", "links"=>[], "tags"=>["limits", "terminal"], "article_id"=>486173, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g004", "stats"=>{"downloads"=>1, "page_views"=>3, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hairy_limits_terminal_cell_number_/486173", "title"=>"Hairy limits terminal cell number.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:07:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/816555"], "description"=>"<p>In <i>bnl-lacZ</i> expressing embryos, (A–E), Bnl (A–E, green) is expressed in the dorsal-most row of muscle cells (A, arrows) and in single cells in the dorsal (B, arrows) and lateral muscles (C, arrows) labeled with β3t (A–C, red). Bnl (D, green) is not expressed in the dorsal epidermis labeled with E-cad (D, arrows, red). Bnl (E, arrows, green) is expressed in the epidermal cells of the segmental grooves labeled with E-cad (E, red). All embryos shown are at stage 14. Embryos in A–C were stained for β3t (red) and β-gal (green) whereas embryos in D and E were stained for E-cad (red) and β-gal. Scale bar in A represents 5 µm.</p>", "links"=>[], "tags"=>["somatic"], "article_id"=>486926, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g009", "stats"=>{"downloads"=>2, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bnl_is_expressed_in_the_somatic_muscle_and_ectoderm_/486926", "title"=>"Bnl is expressed in the somatic muscle and ectoderm.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:11:46"}
  • {"files"=>["https://ndownloader.figshare.com/files/816923"], "description"=>"<p>Graph showing lumen length of terminal branches in wild-type embryos, <i>h<sup>674</sup></i> and <i>h<sup>47</sup></i> homozygous embryos, <i>bnl<sup>P2</sup></i> heterozygous embryos and <i>h<sup>674</sup></i>homozygous embryos with one copy of <i>bnl<sup>P2</sup></i>. n =  number of terminal branches scored. Values are means ± S.D. <i>P</i><0.001.</p>", "links"=>[], "tags"=>["bnl", "terminal", "lumen"], "article_id"=>487292, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g011", "stats"=>{"downloads"=>1, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hairy_and_Bnl_control_terminal_cell_lumen_length_/487292", "title"=>"Hairy and Bnl control terminal cell lumen length.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:13:43"}
  • {"files"=>["https://ndownloader.figshare.com/files/816760"], "description"=>"<p>In stage 13 wild-type embryos (A and A'), <i>bnl</i> RNA is expressed in clusters surrounding the migrating trachea (A, arrow) and to a lesser extent in the circular visceral mesoderm (A', arrowhead). In stage 13 embryos where <i>bnl</i> is overexpressed with <i>twi</i>-GAL4 <i>mef2</i>-GAL4 (B), <i>bnl</i> RNA is expressed in the somatic mesoderm (B, arrowhead). In stage 13 embryos where <i>bnl</i> is expressed with <i>5053</i>-GAL4 (C and C'), <i>bnl</i> RNA is expressed in clusters close to the tracheal cells (C, arrow) and in longitudinal muscle founder cells of the visceral mesoderm (C' arrowheads). In stage 16 embryos expressing <i>bnl</i> with <i>5053</i>-GAL4 (D), <i>bnl</i> RNA is expressed in the ventral oblique lateral body wall muscles (D, arrowhead). In wild-type embryos (E), a single terminal cell (TC) is specified at the tip of each dorsal branch (E, arrow). In embryos overexpressing <i>bnl</i> in the entire mesoderm with <i>twi</i>-GAL4 <i>mef2</i>-GAL4 (F) or in a subset of the mesoderm with <i>5053</i>-GAL4 (G), extra TCs are specified in the dorsal branches (F and G, arrows). In wild-type embryos (H), a distinct number of TCs are specified in the lateral trunks (H, arrows) and the ganglionic branch (H, arrowhead) whereas in embryos expressing <i>bnl</i> in the mesoderm with either <i>twi</i>-GAL4 <i>mef2</i>-GAL4 (I) or <i>5053</i>-GAL4 (J) extra TCs in the lateral trunks (I and J, arrows) and ganglionic branches (J, arrowheads) are specified. Embryos in A–D were hybridized <i>in situ</i> with <i>bnl</i> RNA. Embryos in E–J were stained for DSRF (red) and 2A12 (green). All panels shown are lateral views except panel G which is a dorsal-lateral view. Scale bar in E represents 10 µm.</p>", "links"=>[], "tags"=>["mesoderm", "phenocopies", "mutant", "phenotype", "specifying", "terminal"], "article_id"=>487127, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g010", "stats"=>{"downloads"=>1, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_expression_of_bnl_in_the_mesoderm_phenocopies_hairy_mutant_phenotype_by_specifying_extra_terminal_cells_/487127", "title"=>"expression of <i>bnl</i> in the mesoderm phenocopies <i>hairy</i> mutant phenotype by specifying extra terminal cells.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:12:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/815555"], "description"=>"<p>In <i>h<sup>22</sup></i> heterozygous embryos, the dorsal trunk (DT) is a continuous tube (A, arrow) whereas in <i>h<sup>22</sup></i> (B) and <i>h<sup>674</sup></i> (C) homozygous embryos, the DT is broken (B and C, arrows). In <i>h<sup>22</sup></i> heterozygous embryos (D and G), tracheal cells migrate to form six primary branches (D and G, arrows). In <i>h<sup>22</sup></i> (E and H) and <i>h<sup>674</sup></i> (F and I) homozygous embryos, tracheal cells fail to migrate out (E, F, H and I, arrows). Embryos in panels A, B and C were double stained for 2A12 and β-galactosidase (β-gal) to distinguish heterozygous from homozygous siblings. Embryos in panels D to F were stained for Crumbs (Crb) to label the lumen and β-gal (not shown), and embryos in panels G to I were stained for Crb (white), β-gal (not shown) and Trachealess (Trh) (red) to label tracheal nuclei. Panels in D to I are projections of confocal sections of laterally viewed embryos. Scale bars in D and G represent 10 µm.</p>", "links"=>[], "tags"=>["defective", "mutant"], "article_id"=>485924, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g002", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Tracheal_development_is_defective_in_hairy_mutant_embryos_/485924", "title"=>"Tracheal development is defective in <i>hairy</i> mutant embryos.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:06:21"}
  • {"files"=>["https://ndownloader.figshare.com/files/815402"], "description"=>"<p>In wild-type embryos, Hairy protein is expressed in invaginating cells of the tracheal placode (TP) (A, arrow), in the visceral mesoderm (VM) (B, arrow) and somatic mesoderm (SM) (C, arrow). Scale bar A represents 20 µm.</p>", "links"=>[], "tags"=>["developmental biology/embryology", "developmental biology/morphogenesis and cell biology", "developmental biology/organogenesis"], "article_id"=>485761, "categories"=>["Developmental Biology"], "users"=>["Yaoyao Zhan", "Saw W. Maung", "Bing Shao", "Monn Monn Myat"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014134.g001", "stats"=>{"downloads"=>0, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hairy_protein_expression_during_embryogenesis_/485761", "title"=>"Hairy protein expression during embryogenesis.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 22:05:27"}

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