New Perspectives on the Ecology and Evolution of Siboglinid Tubeworms
Publication Date
February 14, 2011
Journal
PLOS ONE
Authors
Ana Hilário, María Capa, Thomas G. Dahlgren, Kenneth M. Halanych, et al
Volume
6
Issue
2
Pages
e16309
DOI
https://dx.plos.org/10.1371/journal.pone.0016309
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0016309
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/21339826
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3038861
Europe PMC
http://europepmc.org/abstract/MED/21339826
Web of Science
000287367600012
Scopus
79951975874
Mendeley
http://www.mendeley.com/research/new-perspectives-ecology-evolution-siboglinid-tubeworms
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Mendeley | Further Information

{"title"=>"New perspectives on the ecology and evolution of siboglinid tubeworms", "type"=>"journal", "authors"=>[{"first_name"=>"Ana", "last_name"=>"Hilário", "scopus_author_id"=>"24481299600"}, {"first_name"=>"María", "last_name"=>"Capa", "scopus_author_id"=>"6601946008"}, {"first_name"=>"Thomas G.", "last_name"=>"Dahlgren", "scopus_author_id"=>"6603067876"}, {"first_name"=>"Kenneth M.", "last_name"=>"Halanych", "scopus_author_id"=>"7003606785"}, {"first_name"=>"Crispin T.S.", "last_name"=>"Little", "scopus_author_id"=>"7202893507"}, {"first_name"=>"Daniel J.", "last_name"=>"Thornhill", "scopus_author_id"=>"8300865200"}, {"first_name"=>"Caroline", "last_name"=>"Verna", "scopus_author_id"=>"36616711400"}, {"first_name"=>"Adrian G.", "last_name"=>"Glover", "scopus_author_id"=>"7005624922"}], "year"=>2011, "source"=>"PLoS ONE", "identifiers"=>{"sgr"=>"79951975874", "pmid"=>"21339826", "isbn"=>"1932-6203", "scopus"=>"2-s2.0-79951975874", "issn"=>"19326203", "pui"=>"361321153", "doi"=>"10.1371/journal.pone.0016309"}, "id"=>"dcc18caa-171c-3090-915b-2276c23adb08", "abstract"=>"Siboglinids are tube-dweling annelids that are important members of deep-sea chemosynthetic communities, which include hydrothermal vents, cold seeps, whale falls and reduced sediments. As adults, they lack a functional digestive system and rely on microbial endosymbionts for their energetic needs. Recent years have seen a revolution in our understanding of these fascinating worms. Molecular systematic methods now place these animals, formerly known as the phyla Pogonophora and Vestimentifera, within the polychaete clade Siboglinidae. Furthermore, an entirely new radiation of siboglinids, Osedax, has just recently been discovered living on whale bones. The unique and intricate evolutionary association of siboglinids with both geology, in the formation of spreading centres and seeps, and biology with the evolution of large whales, offers opportunities for studies of vicariant evolution and the calibration of molecular clocks. Moreover, new advances in our knowledge of siboglinid anatomy coupled with molecular characterization of microbial symbiont communities are revolutionizing our knowledge of host-symbiont relationships in the Metazoa. Despite these advances, considerable debate persists concerning the evolutionary history of siboglinids. Here we review the morphological, molecular, ecological and fossil data in order to address when and how siboglinids evolved. We discuss the role of ecological conditions in the evolution of siboglinids and present possible scenarios of the evolutionary origin of the symbiotic relationships between siboglinids and their endosymbiotic bacteria.", "link"=>"http://www.mendeley.com/research/new-perspectives-ecology-evolution-siboglinid-tubeworms", "reader_count"=>99, "reader_count_by_academic_status"=>{"Unspecified"=>5, "Professor > Associate Professor"=>4, "Librarian"=>1, "Researcher"=>26, "Student > Doctoral Student"=>7, "Student > Ph. D. Student"=>20, "Student > Postgraduate"=>3, "Student > Master"=>17, "Other"=>4, "Student > Bachelor"=>9, "Professor"=>2}, "reader_count_by_user_role"=>{"Unspecified"=>5, "Professor > Associate Professor"=>4, "Librarian"=>1, "Researcher"=>26, "Student > Doctoral Student"=>7, "Student > Ph. D. Student"=>20, "Student > Postgraduate"=>3, "Student > Master"=>17, "Other"=>4, "Student > Bachelor"=>9, "Professor"=>2}, "reader_count_by_subject_area"=>{"Unspecified"=>7, "Environmental Science"=>9, "Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>69, "Computer Science"=>1, "Earth and Planetary Sciences"=>10}, "reader_count_by_subdiscipline"=>{"Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>10}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>69}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Unspecified"=>{"Unspecified"=>7}, "Environmental Science"=>{"Environmental Science"=>9}}, "reader_count_by_country"=>{"United States"=>4, "Brazil"=>2, "United Kingdom"=>1, "Chile"=>1, "Germany"=>2, "Spain"=>1}, "group_count"=>1}

CrossRef

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/799313"], "description"=>"<p>Note that the sister-group relationship between <i>Osedax</i> and the vestimentiferan-<i>Sclerolinum</i> clade is currently only weakly supported. In this scenario, the putative siboglinid ancestor possessed chemoautotrophic symbionts that have been secondarily lost in <i>Osedax</i> and replaced by a heterotrophic symbiont. Images courtesy of DT, KH, Kevin Fielman and Scott Santos (vestimentiferan), Irmgard Eichinger (<i>Sclerolinum</i>).</p>", "links"=>[], "tags"=>["evolutionary", "siboglinid", "clades", "respective"], "article_id"=>469675, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g008", "stats"=>{"downloads"=>3, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_An_evolutionary_scenario_for_the_origin_of_the_major_siboglinid_clades_and_their_respective_symbiont_/469675", "title"=>"An evolutionary scenario for the origin of the major siboglinid clades and their respective symbiont.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:38:48"}
  • {"files"=>["https://ndownloader.figshare.com/files/798697"], "description"=>"<p>A Bayesian analysis of 18S ribosomal RNA sequences reveals four major clades of siboglinids, from top, <i>Osedax</i> which are specialist on whale carcasses, the vestimentiferans, which are specialist on vents and seeps, <i>Sclerolinum</i> (here presented only by a single sequenced specimen), specialist on organic-rich remains and the frenulates which specialise on organic-rich sediments. Modified from <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Glover1\" target=\"_blank\">[41]</a>. Images courtesy of Tomas Lundälv (whale-fall), Richard Lutz (vent site) and NOCS/JC10 (frenulate in sediment).</p>", "links"=>[], "tags"=>["relationships", "amongst"], "article_id"=>469064, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g003", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_relationships_amongst_Siboglinidae_/469064", "title"=>"Phylogenetic relationships amongst Siboglinidae.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:35:27"}
  • {"files"=>["https://ndownloader.figshare.com/files/798381"], "description"=>"<p>Cumulative citation count for papers published in over the years 1958 to 2007 that deal exclusively with species in the annelid clade Siboglinidae (papers covering general vent/seep biology or symbiosis in general are not included). Significant discoveries are highlighted by arrows and major increases in total citations. These include discoveries in feeding <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Southward2\" target=\"_blank\">[10]</a>, the discovery of bacterial symbiosis <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Cavanaugh1\" target=\"_blank\">[13]</a>, sulfide binding <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Arp2\" target=\"_blank\">[18]</a>, tubeworms at shipwrecks <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Dando1\" target=\"_blank\">[20]</a>, respiration <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Hentschel1\" target=\"_blank\">[22]</a>, embryology <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Young1\" target=\"_blank\">[23]</a>, larval dispersal <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Marsh1\" target=\"_blank\">[24]</a> and the new clade of siboglinids (<i>Osedax</i>) that consume whale bones <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Rouse1\" target=\"_blank\">[25]</a>.</p>", "links"=>[], "tags"=>["counts", "papers", "published", "journals"], "article_id"=>468738, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g001", "stats"=>{"downloads"=>3, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Citation_counts_for_papers_published_in_the_journals_Nature_or_Science_/468738", "title"=>"Citation counts for papers published in the journals <i>Nature</i> or <i>Science</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:33:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/798925"], "description"=>"<p>Tube fossils from ancient seep and vent deposits possibly attributable to vestimentiferans and modern vestimentiferan tubes for comparison. A) Cluster of pyrite replaced tubes in matrix of pyrite, Kambia vent deposit, Cyprus, Early Cretaceous (91 Ma). B) Pyrite replaced tube in pyrite matrix, Figueroa vent deposit, California, USA, Early Jurassic (∼184 Ma), note fine concentric growth lines and wavy, periodically bifurcating longitudinal ridges. C) Tube of holotype (NHM1996:1048) of vestimentiferan <i>Arcovestia ivanovi</i>, note external ornament of fine concentric growth lines and wavy, periodically bifurcating longitudinal ridges. D) Carbonate tubes in matrix of carbonate minerals, Canyon River seep deposit, Washington, USA, Oligocene (∼30 Ma), specimen courtesy of James Goedert. E) Carbonate replaced tube of vestimentiferan (probably <i>Escarpia southwardae</i>) in transverse section from modern seep in the Kouilou pockmark field on the Congo deep-sea fan, 3100m water depth. The original organic tube has been ‘delaminated’ by the growth of aragonite crystals within it. F) Carbonate tube in transverse section, Ganigobis seep deposits, Namibia, Late Carboniferous (∼302 Ma), showing very similar textures to the tube in E. Scale bars: A = 10mm, B = 1mm, C = 2mm, D = 10mm, E = 100µm, F = 100µm.</p>", "links"=>[], "tags"=>["fossils", "attributable"], "article_id"=>469291, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g005", "stats"=>{"downloads"=>2, "page_views"=>21, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Tube_fossils_possibly_attributable_to_vestimentiferans_/469291", "title"=>"Tube fossils possibly attributable to vestimentiferans.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:36:37"}
  • {"files"=>["https://ndownloader.figshare.com/files/798552"], "description"=>"<p>A) <i>Riftia pachyptila</i> giant tubeworms growing on a hydrothermal vent in the north-east Pacific (Image courtesy of Richard Lutz), B) <i>Lamellibrachia luymesi</i> at a cold seep in the Gulf of Mexico (Image courtesy of DT, KH, Kevin Fielman and Scott Santos) and C) <i>Osedax mucofloris</i> living on a whale-bone found off the coast of Sweden.</p>", "links"=>[], "tags"=>["siboglinid"], "article_id"=>468920, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g002", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Examples_of_siboglinid_species_and_their_habitat_requirements_/468920", "title"=>"Examples of siboglinid species and their habitat requirements.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:34:37"}
  • {"files"=>["https://ndownloader.figshare.com/files/799190"], "description"=>"<p>A) Histological section through the spermatheca of <i>Riftia pachyptila</i> (Vestimentifera) (Gc = Gonocoel, PO = Primary oocyte, S = Clusters of spermatozoa, St = Spermatheca) (from <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0016309#pone.0016309-Hilrio1\" target=\"_blank\">[135]</a>). B) Two live males on the trunk of a female of an undescribed species of <i>Osedax</i> recovered in Antarctic waters. C) Brooding larva inside the tube of <i>Siboglinum</i> sp. (Frenulata). Scale bars: A = 200 µm, B = 100 µm, C = 500 µm.</p>", "links"=>[], "tags"=>["ecology", "marine and aquatic sciences", "Evolutionary biology"], "article_id"=>469555, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g007", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Life_history_traits_of_Vestimentifera_Osedax_and_Frenulata_/469555", "title"=>"Life-history traits of Vestimentifera, <i>Osedax</i> and Frenulata.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:38:09"}
  • {"files"=>["https://ndownloader.figshare.com/files/799069"], "description"=>"<p>At hydrothermal vents, sulphide is produced through the inorganic reaction of sulphate with geothermal energy. By contrast, sulphide has a microbial origin at cold seeps, organic-rich sediments, and whale-falls. At cold seeps, the source of sulphide is the anaerobic oxidation of methane coupled to sulphate reduction. At organic-rich sediments, sulphide is produced during the anaerobic degradation of a range of organic compounds. At whale-falls, although sulphide is produced, <i>Osedax</i> worms are thought to rely only on heterotrophic digestion of bone by the endosymbionts. The trophosome (light grey) houses endosymbiotic bacteria (orange ovals). White open circles represent methane and hydrocarbon seepage. Full arrow = reaction, dashed arrow = diffusion, and dotted arrow = acquisition or excretion by the host/symbiont.</p>", "links"=>[], "tags"=>["sulphide", "respiratory", "pathways", "contrasting", "habitats", "siboglinid"], "article_id"=>469426, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g006", "stats"=>{"downloads"=>3, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Sources_of_sulphide_and_respiratory_pathways_at_contrasting_habitats_in_siboglinid_tubeworms_/469426", "title"=>"Sources of sulphide and respiratory pathways at contrasting habitats in siboglinid tubeworms.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:37:25"}
  • {"files"=>["https://ndownloader.figshare.com/files/798783"], "description"=>"<p>With the exception of <i>Sclerolinum</i>, the curve does not asymptote showing that new species have been (up to this day) continuously disclosed.</p>", "links"=>[], "tags"=>["descriptions"], "article_id"=>469151, "categories"=>["Inorganic Chemistry", "Ecology", "Evolutionary Biology"], "users"=>["Ana Hilario", "María Capa", "Thomas G. Dahlgren", "Kenneth M. Halanych", "Crispin T. S. Little", "Daniel J. Thornhill", "Caroline Verna", "Adrian G. Glover"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0016309.g004", "stats"=>{"downloads"=>2, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Cumulative_number_of_species_descriptions_since_the_discovery_of_the_first_siboglind_/469151", "title"=>"Cumulative number of species descriptions since the discovery of the first siboglind.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:35:54"}

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