Phylogenetic Patterns of Colonization and Extinction in Experimentally Assembled Plant Communities
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{"title"=>"Phylogenetic patterns of colonization and extinction in experimentally assembled plant communities", "type"=>"journal", "authors"=>[{"first_name"=>"Marc W.", "last_name"=>"Cadotte", "scopus_author_id"=>"8862337100"}, {"first_name"=>"Sharon Y.", "last_name"=>"Strauss", "scopus_author_id"=>"35585958100"}], "year"=>2011, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"21573117", "doi"=>"10.1371/journal.pone.0019363", "sgr"=>"79955791294", "isbn"=>"1932-6203", "scopus"=>"2-s2.0-79955791294", "issn"=>"19326203", "pui"=>"361746942"}, "id"=>"732d817a-6ae3-36fd-84a5-526a81a2be96", "abstract"=>"Evolutionary history has provided insights into the assembly and functioning of plant communities, yet patterns of phylogenetic community structure have largely been based on non-dynamic observations of natural communities. We examined phylogenetic patterns of natural colonization, extinction and biomass production in experimentally assembled communities.", "link"=>"http://www.mendeley.com/research/phylogenetic-patterns-colonization-extinction-experimentally-assembled-plant-communities", "reader_count"=>111, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>8, "Researcher"=>29, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>37, "Student > Postgraduate"=>8, "Student > Master"=>10, "Other"=>1, "Student > Bachelor"=>6, "Lecturer"=>1, "Professor"=>4}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>8, "Researcher"=>29, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>37, "Student > Postgraduate"=>8, "Student > Master"=>10, "Other"=>1, "Student > Bachelor"=>6, "Lecturer"=>1, "Professor"=>4}, "reader_count_by_subject_area"=>{"Unspecified"=>5, "Environmental Science"=>18, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>85, "Earth and Planetary Sciences"=>2}, "reader_count_by_subdiscipline"=>{"Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>2}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>85}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Unspecified"=>{"Unspecified"=>5}, "Environmental Science"=>{"Environmental Science"=>18}}, "reader_count_by_country"=>{"New Zealand"=>1, "Reunion"=>1, "Czech Republic"=>1, "Sweden"=>1, "United States"=>3, "China"=>1, "Brazil"=>3, "France"=>1, "Chile"=>2, "Switzerland"=>3, "Germany"=>1, "Spain"=>1}, "group_count"=>3}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/389633", "https://ndownloader.figshare.com/files/389666"], "description"=>"<div><h3>Background</h3><p>Evolutionary history has provided insights into the assembly and functioning of plant communities, yet patterns of phylogenetic community structure have largely been based on non-dynamic observations of natural communities. We examined phylogenetic patterns of natural colonization, extinction and biomass production in experimentally assembled communities.</p> <h3>Methodology/Principal Findings</h3><p>We used plant community phylogenetic patterns two years after experimental diversity treatments (1, 2, 4, 8 or 32 species) were discontinued. We constructed a 5-gene molecular phylogeny and statistically compared relatedness of species that colonized or went extinct to remaining community members and patterns of aboveground productivity. Phylogenetic relatedness converged as species-poor plots were colonized and speciose plots experienced extinctions, but plots maintained more differences in composition than in phylogenetic diversity. Successful colonists tended to either be closely or distantly related to community residents. Extinctions did not exhibit any strong relatedness patterns. Finally, plots that increased in phylogenetic diversity also increased in community productivity, though this effect was inseparable from legume colonization, since these colonists tended to be phylogenetically distantly related.</p> <h3>Conclusions</h3><p>We found that successful non-legume colonists were typically found where close relatives already existed in the sown community; in contrast, successful legume colonists (on their own long branch in the phylogeny) resulted in plots that were colonized by distant relatives. While extinctions exhibited no pattern with respect to relatedness to sown plotmates, extinction plus colonization resulted in communities that converged to similar phylogenetic diversity values, while maintaining differences in species composition.</p> </div>", "links"=>[], "tags"=>["phylogenetic", "patterns", "colonization", "extinction", "experimentally", "assembled", "communities"], "article_id"=>136938, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.s001", "https://dx.doi.org/10.1371/journal.pone.0019363.s002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Phylogenetic_Patterns_of_Colonization_and_Extinction_in_Experimentally_Assembled_Plant_Communities/136938", "title"=>"Phylogenetic Patterns of Colonization and Extinction in Experimentally Assembled Plant Communities", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2011-05-06 01:55:38"}
  • {"files"=>["https://ndownloader.figshare.com/files/776601"], "description"=>"<p>Inset histograms show the number of extinction and colonization events for individual species.</p>", "links"=>[], "tags"=>["ecology"], "article_id"=>446974, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_relationship_between_change_in_the_number_of_species_in_a_plot_and_the_number_of_species_planted_/446974", "title"=>"The relationship between change in the number of species in a plot and the number of species planted.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 01:56:14"}
  • {"files"=>["https://ndownloader.figshare.com/files/776651"], "description"=>"<p>Circles are initial plots and lines end at final composition. Plot shows some compositional convergence, but substantial variation among plots remains. Convergence of mean nearest neighbor distances (MNND) (b), where diverse plots (i.e., with 8 or more more species—grey dashed lines) maintain MNND patterns despite species extinctions and species-poor plots (black solid lines) converge to high diversity MNND values.</p>", "links"=>[], "tags"=>["correspondence", "compositional", "envelopes", "delineate"], "article_id"=>447027, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Detrended_Correspondence_Analysis_of_initial_dark_grey_versus_final_light_grey_community_compositional_space_grey_envelopes_delineate_outer_envelope_of_starting_composition_of_plots_a_/447027", "title"=>"Detrended Correspondence Analysis of initial (dark grey) versus final (light grey) community compositional space (grey envelopes delineate outer envelope of starting composition of plots) (a).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 01:57:07"}
  • {"files"=>["https://ndownloader.figshare.com/files/776704"], "description"=>"<p>Plot PD generally declined with the number of species planted (a); there was substantial change in MNND for the low diversity plots, but little change in mean MNND (b); and there appeared to be a linear relationship between planted PD and PD change (c), and between planted MNND and MNND change (d).</p>", "links"=>[], "tags"=>["planted"], "article_id"=>447087, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_relationship_between_planted_diversity_and_diversity_change_in_the_experimental_plots_/447087", "title"=>"The relationship between planted diversity and diversity change in the experimental plots.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 01:58:07"}
  • {"files"=>["https://ndownloader.figshare.com/files/776774"], "description"=>"<p>Density distributions of observed (solid line) and null (dashed line) MNND values between colonists and residents within communities (a, b) and between extinct species and residents (c, d).</p>", "links"=>[], "tags"=>["distributions", "observed", "null", "mnnd", "colonists", "residents", "communities", "extinct"], "article_id"=>447140, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g004"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Density_distributions_of_observed_solid_line_and_null_dashed_line_MNND_values_between_colonists_and_residents_within_communities_a_b_and_between_extinct_species_and_residents_c_d_/447140", "title"=>"Density distributions of observed (solid line) and null (dashed line) MNND values between colonists and residents within communities (a, b) and between extinct species and residents (c, d).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 01:59:00"}
  • {"files"=>["https://ndownloader.figshare.com/files/776826"], "description"=>"<p>Regression line represents a statistically significant relationship.</p>", "links"=>[], "tags"=>["phylogenetic", "biomass", "2001"], "article_id"=>447201, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g005"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Measures_of_phylogenetic_diversity_PD_and_MNND_and_biomass_production_in_1998_2001_and_the_change_in_biomass_production_/447201", "title"=>"Measures of phylogenetic diversity (PD and MNND) and biomass production in 1998, 2001 and the change in biomass production.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 02:00:01"}
  • {"files"=>["https://ndownloader.figshare.com/files/776977"], "description"=>"<p>Open circles are plots that were initiated with a legume and ‘+’ represents plots not initiated with a legume, but were subsequently colonized by one.</p>", "links"=>[], "tags"=>["relationships", "pd", "biomass"], "article_id"=>447350, "categories"=>["Ecology"], "users"=>["Marc W. Cadotte", "Sharon Y. Strauss"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0019363.g006"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_relationships_between_the_change_in_PD_and_change_in_biomass_production_/447350", "title"=>"The relationships between the change in PD and change in biomass production.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2011-05-06 02:02:30"}

PMC Usage Stats | Further Information

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Relative Metric

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