Using GIS Mapping of the Extent of Nearshore Rocky Reefs to Estimate the Abundance and Reproductive Output of Important Fishery Species
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{"title"=>"Using GIS mapping of the extent of nearshore rocky reefs to estimate the abundance and reproductive output of important fishery species", "type"=>"journal", "authors"=>[{"first_name"=>"Jeremy T.", "last_name"=>"Claisse", "scopus_author_id"=>"25645908700"}, {"first_name"=>"Daniel J.", "last_name"=>"Pondella", "scopus_author_id"=>"6602159517"}, {"first_name"=>"Jonathan P.", "last_name"=>"Williams", "scopus_author_id"=>"55728536200"}, {"first_name"=>"James", "last_name"=>"Sadd", "scopus_author_id"=>"6701659317"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-84855832172", "sgr"=>"84855832172", "pui"=>"364093720", "isbn"=>"1932-6203", "pmid"=>"22272326", "doi"=>"10.1371/journal.pone.0030290"}, "id"=>"cc8deba8-512b-3780-84a7-b51d97070edc", "abstract"=>"Kelp Bass (Paralabrax clathratus) and California Sheephead (Semicossyphus pulcher) are economically and ecologically valuable rocky reef fishes in southern California, making them likely indicator species for evaluating resource management actions. Multiple spatial datasets, aerial and satellite photography, underwater observations and expert judgment were used to produce a comprehensive map of nearshore natural rocky reef habitat for the Santa Monica Bay region (California, USA). It was then used to examine the relative contribution of individual reefs to a regional estimate of abundance and reproductive potential of the focal species. For the reefs surveyed for fishes (i.e. 18 out of the 22 in the region, comprising 82% the natural rocky reef habitat <30 m depth, with a total area of 1850 ha), total abundance and annual egg production of California Sheephead were 451 thousand fish (95% CI: 369 to 533 thousand) and 203 billion eggs (95% CI: 135 to 272 billion). For Kelp Bass, estimates were 805 thousand fish (95% CI: 669 to 941 thousand) and 512 billion eggs (95% CI: 414 to 610 billion). Size structure and reef area were key factors in reef-specific contributions to the regional egg production. The size structures of both species illustrated impacts from fishing, and results demonstrate the potential that relatively small increases in the proportion of large females on larger reefs could have on regional egg production. For California Sheephead, a substantial proportion of the regional egg production estimate (>30%) was produced from a relatively small proportion of the regional reef area (c. 10%). Natural nearshore rocky reefs make up only 11% of the area in the newly designated MPAs in this region, but results provide some optimism that regional fisheries could benefit through an increase in overall reproductive output, if adequate increases in size structure of targeted species are realized.", "link"=>"http://www.mendeley.com/research/using-gis-mapping-extent-nearshore-rocky-reefs-estimate-abundance-reproductive-output-important-fish", "reader_count"=>55, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>2, "Researcher"=>17, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>12, "Student > Master"=>12, "Student > Bachelor"=>6, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>2, "Researcher"=>17, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>12, "Student > Master"=>12, "Student > Bachelor"=>6, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Environmental Science"=>14, "Biochemistry, Genetics and Molecular Biology"=>1, "Mathematics"=>1, "Agricultural and Biological Sciences"=>33, "Earth and Planetary Sciences"=>3}, "reader_count_by_subdiscipline"=>{"Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>3}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>33}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>14}}, "reader_count_by_country"=>{"United States"=>3, "Brazil"=>1, "South Africa"=>1, "Mexico"=>2, "Chile"=>1}, "group_count"=>3}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/691546"], "description"=>"<p>Extent of nearshore rocky reefs in Santa Monica Bay, California for (A) western Malibu, (B) eastern Malibu and (C) Palos Verdes Peninsula. The 30 m depth contour appears as a dotted line. Note that while some artificial reefs (for example sewer outfalls at Whites Point) and natural rock reef habitat extending below 30m are included here, they were not included in the area estimates (total extent of rocky reef habitat <30 m depth) in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030290#pone-0030290-t001\" target=\"_blank\">Table 1</a>.</p>", "links"=>[], "tags"=>["nearshore", "rocky", "reefs", "santa", "monica"], "article_id"=>362001, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Extent_of_nearshore_rocky_reefs_in_Santa_Monica_Bay_California_/362001", "title"=>"Extent of nearshore rocky reefs in Santa Monica Bay, California.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:49:53"}
  • {"files"=>["https://ndownloader.figshare.com/files/691685"], "description"=>"<p>Habitat layers at Ridges and Rocky Point reefs using kml file displayed with Google Earth™. (A) Orange – side scan sonar - Habitat Classification. (B) Green – Kelp Canopy. (C) Yellow – course scale habitat and previously unmapped shallow rocky reef habitat. (D) All three layers combined exhibiting total extent of rocky reef habitat which is displayed for the region in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030290#pone-0030290-g001\" target=\"_blank\">Figure 1</a>.</p>", "links"=>[], "tags"=>["layers", "ridges", "rocky"], "article_id"=>362152, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Habitat_layers_at_Ridges_and_Rocky_Point_reefs_/362152", "title"=>"Habitat layers at Ridges and Rocky Point reefs.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:50:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/691775"], "description"=>"<p>Relationship between total length and annual egg production for individual California Sheephead (<i>Semicossyphus pulcher</i>) (solid line) and Kelp Bass (<i>Paralabrax clathratus</i>) (dashed line) calculated using sources in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030290#pone-0030290-t002\" target=\"_blank\">Table 2</a>.</p>", "links"=>[], "tags"=>["california", "sheephead", "kelp"], "article_id"=>362237, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Relationship_between_length_and_annual_egg_production_for_California_Sheephead_and_Kelp_Bass_/362237", "title"=>"Relationship between length and annual egg production for California Sheephead and Kelp Bass.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:51:16"}
  • {"files"=>["https://ndownloader.figshare.com/files/691869"], "description"=>"<p>Depth zone specific density of (A) Kelp Bass (<i>Paralabrax clathratus</i>) and (B) California Sheephead (<i>Semicossyphus pulcher</i>) for rocky reefs in Santa Monica Bay, California. Error bars are 95% likelihood profile confidence intervals.</p>", "links"=>[], "tags"=>["patterns", "kelp", "bass", "california"], "article_id"=>362324, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g004"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Depth_zone_specific_density_patterns_of_Kelp_Bass_and_California_Sheephead_/362324", "title"=>"Depth zone specific density patterns of Kelp Bass and California Sheephead.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:51:46"}
  • {"files"=>["https://ndownloader.figshare.com/files/691954"], "description"=>"<p>California Sheephead (<i>Semicossyphus pulcher)</i> (A) mean numerical density, (B) total abundance and (C) total egg production for each reef that was surveyed in Santa Monica Bay, California. Error bars are 95% confidence intervals.</p>", "links"=>[], "tags"=>["sheephead", "abundance"], "article_id"=>362414, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g005"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_California_Sheephead_density_abundance_and_egg_production_/362414", "title"=>"California Sheephead density, abundance and egg production.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:52:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/692027"], "description"=>"<p>California Sheephead (<i>Semicossyphus pulcher</i>) size structure (proportion of individuals per 5 cm size class) of females (white) and males (black) for Little Dume reef and Rocky Point reef. The legal minimum size limit (30 cm) for recreational fisheries is indicated by a black line.</p>", "links"=>[], "tags"=>["sheephead", "dume", "rocky"], "article_id"=>362484, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g006"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_California_Sheephead_size_structure_at_Little_Dume_and_Rocky_Point_/362484", "title"=>"California Sheephead size structure at Little Dume and Rocky Point.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:52:38"}
  • {"files"=>["https://ndownloader.figshare.com/files/692111"], "description"=>"<p>Kelp Bass (<i>Paralabrax clathratus</i>) (A) mean numerical density, (B) total abundance and (C) total egg production for each reef that was surveyed in Santa Monica Bay, California. Error bars are 95% confidence intervals.</p>", "links"=>[], "tags"=>["bass", "abundance"], "article_id"=>362560, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g007"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Kelp_Bass_density_abundance_and_egg_production_/362560", "title"=>"Kelp Bass density, abundance and egg production.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:53:03"}
  • {"files"=>["https://ndownloader.figshare.com/files/692197"], "description"=>"<p>Kelp Bass (<i>Paralabrax clathratus</i>) size structure (proportion of individuals per 5 cm size class) for Encinal Canyon reef and Rocky Point reef. The legal minimum size limit (30 cm) for recreational fisheries is indicated by a black line.</p>", "links"=>[], "tags"=>["bass", "encinal", "canyon", "rocky"], "article_id"=>362645, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g008"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Kelp_Bass_size_structure_at_Encinal_Canyon_and_Rocky_Point_/362645", "title"=>"Kelp Bass size structure at Encinal Canyon and Rocky Point.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:53:27"}
  • {"files"=>["https://ndownloader.figshare.com/files/692281"], "description"=>"<p>Map of the extent of nearshore rocky reef habitat in each of the MPAs designated in (a) Malibu and (b) the Palos Verdes Peninsula.</p>", "links"=>[], "tags"=>["nearshore", "rocky", "reef", "santa", "monica"], "article_id"=>362727, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.g009"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Map_of_nearshore_rocky_reef_habitat_in_Santa_Monica_Bay_MPAs_/362727", "title"=>"Map of nearshore rocky reef habitat in Santa Monica Bay MPAs.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 09:53:53"}
  • {"files"=>["https://ndownloader.figshare.com/files/692375"], "description"=>"1<p>The relationship reported in Oda et al. (1993) was using the Log (10) scale, however, the actual regression (as evident in their <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0030290#pone-0030290-g006\" target=\"_blank\">Figure 6</a>) was fitted with natural log transformations. The corrected relationship we used is reported here.</p>", "links"=>[], "tags"=>["relationships", "size-specific", "fecundity"], "article_id"=>362827, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.t002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Life_history_relationships_used_to_calculate_size_specific_annual_fecundity_relationships_/362827", "title"=>"Life history relationships used to calculate size-specific annual fecundity relationships.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 09:54:19"}
  • {"files"=>["https://ndownloader.figshare.com/files/692403"], "description"=>"<p>Amount of mapped habitat (i.e. nearshore < 30 m depth natural rocky reef) and estimated annual egg production in recently designated MPAs in Santa Monica Bay.</p>", "links"=>[], "tags"=>["santa", "monica"], "article_id"=>362858, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.t003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Habitat_area_and_egg_production_in_Santa_Monica_Bay_MPAs_/362858", "title"=>"Habitat area and egg production in Santa Monica Bay MPAs.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 09:54:29"}
  • {"files"=>["https://ndownloader.figshare.com/files/692436"], "description"=>"<p>Area of natural rocky reef habitat <30 m depth, summary of fish sampling in each depth zone and estimated proportion of each reef in each depth zone. ns: reefs were not sampled for fishes. Blank cells indicate that rocky reef habitat was not present in that depth zone during fish sampling.</p><p>*An additional transect was performed during a sampling event, however, this does not reflect a higher proportion of reef in that depth zone.</p><p>**Depth zone was present at some or all fish sampling sites, but not sampled. In these cases the fish metrics for the outer zone were used to calculate reef specific metrics.</p>", "links"=>[], "tags"=>["areas"], "article_id"=>362889, "categories"=>["Inorganic Chemistry", "Ecology"], "users"=>["Jeremy T. Claisse", "Daniel J. Pondella II", "Jonathan P. Williams", "James Sadd"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0030290.t001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Reef_areas_and_summary_of_depth_zone_specific_fish_sampling_/362889", "title"=>"Reef areas and summary of depth zone specific fish sampling.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 09:54:38"}

PMC Usage Stats | Further Information

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Relative Metric

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