Toward a Global Phylogeny of the “Living Fossil" Crustacean Order of the Notostraca
Publication Date
April 18, 2012
Journal
PLOS ONE
Authors
Bram Vanschoenwinkel, Tom Pinceel, Maarten P. M. Vanhove, Carla Denis, et al
Volume
7
Issue
4
Pages
e34998
DOI
https://dx.plos.org/10.1371/journal.pone.0034998
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0034998
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/22529967
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3329532
Europe PMC
http://europepmc.org/abstract/MED/22529967
Web of Science
000305350600050
Scopus
84859972865
Mendeley
http://www.mendeley.com/research/toward-global-phylogeny-living-fossil-crustacean-order-notostraca
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Mendeley | Further Information

{"title"=>"Toward a global phylogeny of the \"living fossil\" crustacean order of the notostraca", "type"=>"journal", "authors"=>[{"first_name"=>"Bram", "last_name"=>"Vanschoenwinkel", "scopus_author_id"=>"23020485400"}, {"first_name"=>"Tom", "last_name"=>"Pinceel", "scopus_author_id"=>"37065182900"}, {"first_name"=>"Maarten P.M.", "last_name"=>"Vanhove", "scopus_author_id"=>"26535240500"}, {"first_name"=>"Carla", "last_name"=>"Denis", "scopus_author_id"=>"57196991025"}, {"first_name"=>"Merlijn", "last_name"=>"Jocque", "scopus_author_id"=>"6504029293"}, {"first_name"=>"Brian V.", "last_name"=>"Timms", "scopus_author_id"=>"7006653852"}, {"first_name"=>"Luc", "last_name"=>"Brendonck", "scopus_author_id"=>"6701481252"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"22529967", "issn"=>"19326203", "doi"=>"10.1371/journal.pone.0034998", "pui"=>"364660902", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "scopus"=>"2-s2.0-84859972865", "sgr"=>"84859972865"}, "id"=>"c25d48df-b0d9-396d-bf36-3daedbcddb71", "abstract"=>"Tadpole shrimp (Crustacea, Notostraca) are iconic inhabitants of temporary aquatic habitats worldwide. Often cited as prime examples of evolutionary stasis, surviving representatives closely resemble fossils older than 200 mya, suggestive of an ancient origin. Despite significant interest in the group as 'living fossils' the taxonomy of surviving taxa is still under debate and both the phylogenetic relationships among different lineages and the timing of diversification remain unclear. We constructed a molecular phylogeny of the Notostraca using model based phylogenetic methods. Our analyses supported the monophyly of the two genera Triops and Lepidurus, although for Triops support was weak. Results also revealed high levels of cryptic diversity as well as a peculiar biogeographic link between Australia and North America presumably mediated by historic long distance dispersal. We concluded that, although some present day tadpole shrimp species closely resemble fossil specimens as old as 250 mya, no molecular support was found for an ancient (pre) Mesozoic radiation. Instead, living tadpole shrimp are most likely the result of a relatively recent radiation in the Cenozoic era and close resemblances between recent and fossil taxa are probably the result of the highly conserved general morphology in this group and of homoplasy.", "link"=>"http://www.mendeley.com/research/toward-global-phylogeny-living-fossil-crustacean-order-notostraca", "reader_count"=>59, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>4, "Researcher"=>17, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>13, "Student > Master"=>10, "Other"=>1, "Student > Bachelor"=>8, "Lecturer > Senior Lecturer"=>1, "Professor"=>3, "Unspecified"=>1}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>4, "Researcher"=>17, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>13, "Student > Master"=>10, "Other"=>1, "Student > Bachelor"=>8, "Lecturer > Senior Lecturer"=>1, "Professor"=>3, "Unspecified"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Environmental Science"=>6, "Biochemistry, Genetics and Molecular Biology"=>3, "Agricultural and Biological Sciences"=>44, "Earth and Planetary Sciences"=>3}, "reader_count_by_subdiscipline"=>{"Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>3}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>44}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>3}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>6}}, "reader_count_by_country"=>{"United States"=>1, "Italy"=>1, "Mexico"=>1, "United Kingdom"=>1, "Portugal"=>1, "Germany"=>1}, "group_count"=>1}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/652128"], "description"=>"<p>Statistics are only provided for taxa for which multiple sequences were available.</p>", "links"=>[], "tags"=>["divergence", "kimura", "2-parameter", "notostracan", "lineages", "coi", "12s", "rrna"], "article_id"=>322608, "categories"=>["Ecology", "Genetics", "Evolutionary Biology"], "users"=>["Bram Vanschoenwinkel", "Tom Pinceel", "Maarten P. M. Vanhove", "Carla Denis", "Merlijn Jocque", "Brian V. Timms", "Luc Brendonck"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0034998.t001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Molecular_divergence_minimum_maximum_and_average_Kimura_2_parameter_distances_within_main_notostracan_lineages_based_on_COI_and_12S_rRNA_genes_/322608", "title"=>"Molecular divergence (minimum, maximum and average Kimura 2-parameter distances) within main notostracan lineages based on COI and 12S rRNA genes.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-04-18 00:43:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/651797"], "description"=>"<p>(A–B) Examples of tadpole shrimp representatives belonging to the genera <i>Lepidurus</i> and <i>Triops</i>, respectively, illustrating the supra anal plate: a posterior extension of the telson characteristic for <i>Lepidurus</i>. (A) <i>Lepidurus apus</i> (photo: Jacques Pages), (B) <i>Triops cancriformis</i> (photo: Aline Waterkeyn), scale bar = 2 cm; (C) Geographic distribution of investigated Notostraca populations. Locality numbers correspond with population entries in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034998#pone.0034998.s002\" target=\"_blank\">Table S1</a>.</p>", "links"=>[], "tags"=>["habitus", "geographic", "notostraca", "taxa", "populations", "included"], "article_id"=>322279, "categories"=>["Ecology", "Genetics", "Evolutionary Biology"], "users"=>["Bram Vanschoenwinkel", "Tom Pinceel", "Maarten P. M. Vanhove", "Carla Denis", "Merlijn Jocque", "Brian V. Timms", "Luc Brendonck"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0034998.g001", "stats"=>{"downloads"=>4, "page_views"=>19, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Overview_of_the_general_habitus_and_the_geographic_distribution_of_Notostraca_taxa_and_populations_included_in_this_study_/322279", "title"=>"Overview of the general habitus and the geographic distribution of Notostraca taxa and populations included in this study.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-04-18 00:37:59"}
  • {"files"=>["https://ndownloader.figshare.com/files/651980"], "description"=>"<p>Numbers at nodes represent bootstrap values of quartet puzzling, maximum likelihood, maximum parsimony, neighbour joining and posterior probability of Bayesian inference. Unsupported groupings are indicated using a ‘-’. No value is provided when an alternative placement of the clade in the phylogeny is suggested. Numbers between brackets are locality numbers corresponding to population entries in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034998#pone.0034998.s002\" target=\"_blank\">Table S1</a>.</p>", "links"=>[], "tags"=>["inference", "phylogram", "coi", "12s", "rrna"], "article_id"=>322465, "categories"=>["Ecology", "Genetics", "Evolutionary Biology"], "users"=>["Bram Vanschoenwinkel", "Tom Pinceel", "Maarten P. M. Vanhove", "Carla Denis", "Merlijn Jocque", "Brian V. Timms", "Luc Brendonck"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0034998.g002", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bayesian_inference_phylogram_based_on_A_COI_and_B_12S_rRNA_sequences_/322465", "title"=>"Bayesian inference phylogram based on (A) COI and (B) 12S rRNA sequences.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-04-18 00:41:05"}
  • {"files"=>["https://ndownloader.figshare.com/files/334718", "https://ndownloader.figshare.com/files/334820", "https://ndownloader.figshare.com/files/334931", "https://ndownloader.figshare.com/files/335012", "https://ndownloader.figshare.com/files/335083", "https://ndownloader.figshare.com/files/335147", "https://ndownloader.figshare.com/files/335212"], "description"=>"<div><p>Tadpole shrimp (Crustacea, Notostraca) are iconic inhabitants of temporary aquatic habitats worldwide. Often cited as prime examples of evolutionary stasis, surviving representatives closely resemble fossils older than 200 mya, suggestive of an ancient origin. Despite significant interest in the group as ‘living fossils’ the taxonomy of surviving taxa is still under debate and both the phylogenetic relationships among different lineages and the timing of diversification remain unclear. We constructed a molecular phylogeny of the Notostraca using model based phylogenetic methods. Our analyses supported the monophyly of the two genera <em>Triops</em> and <em>Lepidurus</em>, although for <em>Triops</em> support was weak. Results also revealed high levels of cryptic diversity as well as a peculiar biogeographic link between Australia and North America presumably mediated by historic long distance dispersal. We concluded that, although some present day tadpole shrimp species closely resemble fossil specimens as old as 250 mya, no molecular support was found for an ancient (pre) Mesozoic radiation. Instead, living tadpole shrimp are most likely the result of a relatively recent radiation in the Cenozoic era and close resemblances between recent and fossil taxa are probably the result of the highly conserved general morphology in this group and of homoplasy.</p> </div>", "links"=>[], "tags"=>["phylogeny", "crustacean", "notostraca"], "article_id"=>126135, "categories"=>["Ecology", "Genetics", "Evolutionary Biology"], "users"=>["Bram Vanschoenwinkel", "Tom Pinceel", "Maarten P. M. Vanhove", "Carla Denis", "Merlijn Jocque", "Brian V. Timms", "Luc Brendonck"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0034998.s001", "https://dx.doi.org/10.1371/journal.pone.0034998.s002", "https://dx.doi.org/10.1371/journal.pone.0034998.s003", "https://dx.doi.org/10.1371/journal.pone.0034998.s004", "https://dx.doi.org/10.1371/journal.pone.0034998.s005", "https://dx.doi.org/10.1371/journal.pone.0034998.s006", "https://dx.doi.org/10.1371/journal.pone.0034998.s007"], "stats"=>{"downloads"=>12, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Toward_a_Global_Phylogeny_of_the_Living_Fossil_Crustacean_Order_of_the_Notostraca/126135", "title"=>"Toward a Global Phylogeny of the “Living Fossil\" Crustacean Order of the Notostraca", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2012-04-18 01:42:15"}

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Relative Metric

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