Isolation and Characterization of Three Mammalian Orthoreoviruses from European Bats
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{"title"=>"Isolation and characterization of three mammalian orthoreoviruses from European bats", "type"=>"journal", "authors"=>[{"first_name"=>"Claudia", "last_name"=>"Kohl", "scopus_author_id"=>"54995286300"}, {"first_name"=>"René", "last_name"=>"Lesnik", "scopus_author_id"=>"57193841986"}, {"first_name"=>"Annika", "last_name"=>"Brinkmann", "scopus_author_id"=>"55258915300"}, {"first_name"=>"Arnt", "last_name"=>"Ebinger", "scopus_author_id"=>"55258487900"}, {"first_name"=>"Aleksandar", "last_name"=>"Radonić", "scopus_author_id"=>"6603572258"}, {"first_name"=>"Andreas", "last_name"=>"Nitsche", "scopus_author_id"=>"7004626809"}, {"first_name"=>"Kristin", "last_name"=>"Mühldorfer", "scopus_author_id"=>"35300050400"}, {"first_name"=>"Gudrun", "last_name"=>"Wibbelt", "scopus_author_id"=>"23468332600"}, {"first_name"=>"Andreas", "last_name"=>"Kurth", "scopus_author_id"=>"56459779600"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"22905211", "doi"=>"10.1371/journal.pone.0043106", "sgr"=>"84865056977", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "scopus"=>"2-s2.0-84865056977", "issn"=>"19326203", "pui"=>"365445524"}, "id"=>"81a28d90-dfea-3e31-9f83-faf65d259a30", "abstract"=>"In recent years novel human respiratory disease agents have been described in South East Asia and Australia. The causative pathogens were classified as pteropine orthoreoviruses with strong phylogenetic relationship to orthoreoviruses of flying foxes inhabiting these regions. Subsequently, a zoonotic bat-to-human transmission has been assumed. We report the isolation of three novel mammalian orthoreoviruses (MRVs) from European bats, comprising bat-borne orthoreovirus outside of South East Asia and Australia and moreover detected in insectivorous bats (Microchiroptera). MRVs are well known to infect a broad range of mammals including man. Although they are associated with rather mild and clinically unapparent infections in their hosts, there is growing evidence of their ability to also induce more severe illness in dogs and man. In this study, eight out of 120 vespertilionid bats proved to be infected with one out of three novel MRV isolates, with a distinct organ tropism for the intestine. One isolate was analyzed by 454 genome sequencing. The obtained strain T3/Bat/Germany/342/08 had closest phylogenetic relationship to MRV strain T3D/04, isolated from a dog. These novel reoviruses provide a rare chance of gaining insight into possible transmission events and of tracing the evolution of bat viruses.", "link"=>"http://www.mendeley.com/research/isolation-characterization-three-mammalian-orthoreoviruses-european-bats", "reader_count"=>37, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>13, "Other"=>1, "Student > Master"=>5, "Student > Bachelor"=>6}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>13, "Other"=>1, "Student > Master"=>5, "Student > Bachelor"=>6}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Environmental Science"=>3, "Biochemistry, Genetics and Molecular Biology"=>5, "Mathematics"=>1, "Agricultural and Biological Sciences"=>20, "Medicine and Dentistry"=>4, "Veterinary Science and Veterinary Medicine"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>4}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>20}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>5}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>3}, "Veterinary Science and Veterinary Medicine"=>{"Veterinary Science and Veterinary Medicine"=>1}}, "reader_count_by_country"=>{"Venezuela"=>1, "United States"=>1, "China"=>1, "Italy"=>1}, "group_count"=>4}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/312314"], "description"=>"<div><p>In recent years novel human respiratory disease agents have been described in South East Asia and Australia. The causative pathogens were classified as pteropine orthoreoviruses with strong phylogenetic relationship to orthoreoviruses of flying foxes inhabiting these regions. Subsequently, a zoonotic bat-to-human transmission has been assumed. We report the isolation of three novel mammalian orthoreoviruses (MRVs) from European bats, comprising bat-borne orthoreovirus outside of South East Asia and Australia and moreover detected in insectivorous bats (<em>Microchiroptera</em>). MRVs are well known to infect a broad range of mammals including man. Although they are associated with rather mild and clinically unapparent infections in their hosts, there is growing evidence of their ability to also induce more severe illness in dogs and man. In this study, eight out of 120 vespertilionid bats proved to be infected with one out of three novel MRV isolates, with a distinct organ tropism for the intestine. One isolate was analyzed by 454 genome sequencing. The obtained strain T3/Bat/Germany/342/08 had closest phylogenetic relationship to MRV strain T3D/04, isolated from a dog. These novel reoviruses provide a rare chance of gaining insight into possible transmission events and of tracing the evolution of bat viruses.</p> </div>", "links"=>[], "tags"=>["characterization", "mammalian", "orthoreoviruses", "european", "bats"], "article_id"=>121610, "categories"=>["Biological Sciences", "Cancer", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Isolation_and_Characterization_of_Three_Mammalian_Orthoreoviruses_from_European_Bats/121610", "title"=>"Isolation and Characterization of Three Mammalian Orthoreoviruses from European Bats", "pos_in_sequence"=>0, "defined_type"=>2, "published_date"=>"2012-08-14 00:26:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/592161"], "description"=>"<p>A: control cells. B: cytopathogenic effect of infected cells 3 dpi with strain T3/Bat/Germany/342/08 (see also life cell imaging video Fig S1). Electron microscopy images of strain T3/Bat/Germany/342/08. C: Negative staining of cell-culture supernatant. Non-enveloped reoviral particles with double-layered capsid structure were observed (diameter = approximately 70 nm). Bar is indicating 100 nm. D: Ultra-thin sections of infected Vero E6 cells displayed typical contrast-rich virus particles, organized as paracrystalline structures within the cytosol. Bar is indicating 2 µm.</p>", "links"=>[], "tags"=>["microscopy", "images", "vero", "e6"], "article_id"=>262649, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.g001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Light_microscopy_images_of_Vero_E6_cells_/262649", "title"=>"Light microscopy images of Vero E6 cells.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-08-14 00:44:09"}
  • {"files"=>["https://ndownloader.figshare.com/files/592272"], "description"=>"<p>Phylogenetic (Bayesian) analysis of T3/Bat/Germany/342/08, Bat MRV 019/09 and Bat MRV 021/09, using free-end alignments of nucleotide sequences of the partial L1 segments of multiple orthoreovirus species. Posterior probability values are depicted. Strains T3/Bat/Germany/342/08, Bat MRV019/09 and Bat MRV021/09 are shown in magenta and bold. Scale bar shows the evolutionary distance of 0.3 nt substitutions per position. The calculations were unrooted, but for visualization the species <i>reptilian orthoreovirus</i> was used as an outgroup.</p>", "links"=>[], "tags"=>["containing"], "article_id"=>262760, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.g002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_tree_containing_the_three_novel_isolates_/262760", "title"=>"Phylogenetic tree containing the three novel isolates.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-08-14 00:46:00"}
  • {"files"=>["https://ndownloader.figshare.com/files/592333"], "description"=>"<p>Bayesian analysis of T3/Bat/Germany/342/08 using free-end alignments of nucleotide sequences of five segments of multiple orthoreovirus species. In genome order: A: complete L1 segment. B: S1 segment, complete cds, C: complete S2 segment, D: complete S3 segment, E: complete S4 segment, Posterior probability values are depicted. Strain T3/Bat/Germany/342/08 is shown in bold. Scale bar shows the evolutionary distance of nt substitutions per position. The calculations were unrooted, but for visualization mid-point root was applied.</p>", "links"=>[], "tags"=>["trees", "segments"], "article_id"=>262824, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.g003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_trees_of_five_particular_segments_of_isolate_Bat_342_08_/262824", "title"=>"Phylogenetic trees of five particular segments of isolate Bat/342/08.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-08-14 00:47:04"}
  • {"files"=>["https://ndownloader.figshare.com/files/592469"], "description"=>"<p>Its abridged length is due to the availability of only a shorter T3D/04 sequence. The protein structure (α-helix, β-strand, coil and turn) was predicted by Geneious Pro for all strains, and rectangles indicate structure similarity between strains T3/Bat/Germany/342/08 and T3D/04 compared to prototype strain T3/Dearing.</p>", "links"=>[], "tags"=>["alignment"], "article_id"=>262961, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.g004"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Free_end_protein_alignment_of_the_partial_963_1_protein_/262961", "title"=>"Free-end protein alignment of the partial σ1 protein.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-08-14 00:49:21"}
  • {"files"=>["https://ndownloader.figshare.com/files/592588"], "description"=>"<p>m, male; f, female; −, none; +, mild; ++, moderate; +++, severe (degree of severity);</p>*<p>per ml of homogenized organ tissue (average size of tissue piece 8 mm<sup>3</sup>).</p>", "links"=>[], "tags"=>["molecular", "histopathologic", "vespertilionid", "bats"], "article_id"=>263067, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.t002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Summary_of_the_molecular_biological_and_histopathologic_results_of_vespertilionid_bats_found_positive_for_orthoreoviruses_/263067", "title"=>"Summary of the molecular biological and histopathologic results of vespertilionid bats found positive for orthoreoviruses.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-08-14 00:51:07"}
  • {"files"=>["https://ndownloader.figshare.com/files/592630"], "description"=>"<p>Functions of proteins encoded by open reading frames in between the non-coding sequences are predicted analog to known members of the genus Orthoreovirus. bp, base pair;</p>*<p>Terminal sequence determined by RACE PCR;</p>+<p>Predicted protein functions reported by Coombs, 2006;</p>§<p>reversely directed ORF with unknown function.</p>", "links"=>[], "tags"=>["sequences", "segments"], "article_id"=>263117, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.t003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Terminal_sequences_and_size_of_the_ten_segments_of_the_T3_Bat_Germany_342_08_genome_/263117", "title"=>"Terminal sequences and size of the ten segments of the T3/Bat/Germany/342/08 genome.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-08-14 00:51:57"}
  • {"files"=>["https://ndownloader.figshare.com/files/592670"], "description"=>"<p>Based on sequences (197 nt) revealed by nested PCR amplification, targeting the RNA-dependent RNA polymerase gene. Accession numbers: JQ412755, JQ412765 and JQ412766.</p>", "links"=>[], "tags"=>["homology", "percent", "orthoreovirus"], "article_id"=>263153, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.t001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Sequence_homology_in_percent_between_three_novel_orthoreovirus_strains_/263153", "title"=>"Sequence homology in percent between three novel orthoreovirus strains.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-08-14 00:52:33"}
  • {"files"=>["https://ndownloader.figshare.com/files/592712"], "description"=>"<p>na = not available.</p>", "links"=>[], "tags"=>["nucleotide", "amino", "sequences", "prototype", "strains"], "article_id"=>263197, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.t004"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Comparison_of_nucleotide_and_amino_acid_sequences_of_the_prototype_strains_available_for_strain_T3_Bat_Germany_324_08_/263197", "title"=>"Comparison of nucleotide and amino acid sequences of the prototype strains available for strain T3/Bat/Germany/324/08.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-08-14 00:53:17"}
  • {"files"=>["https://ndownloader.figshare.com/files/592749"], "description"=>"<p>Overview: Orthoreovirus strains isolated from or associated with bats.</p>", "links"=>[], "tags"=>["orthoreovirus", "strains"], "article_id"=>263237, "categories"=>["Virology", "Biological Sciences", "Genetics", "Microbiology", "Evolutionary Biology"], "users"=>["Claudia Kohl", "René Lesnik", "Annika Brinkmann", "Arnt Ebinger", "Aleksandar Radonić", "Andreas Nitsche", "Kristin Mühldorfer", "Gudrun Wibbelt", "Andreas Kurth"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0043106.t005"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Overview_Orthoreovirus_strains_isolated_from_or_associated_with_bats_/263237", "title"=>"Overview: Orthoreovirus strains isolated from or associated with bats.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-08-14 00:53:57"}

PMC Usage Stats | Further Information

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Relative Metric

{"start_date"=>"2012-01-01T00:00:00Z", "end_date"=>"2012-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Organisms", "average_usage"=>[331, 557, 677, 777, 868, 960, 1050, 1136, 1223, 1307, 1390, 1466, 1536, 1603, 1673, 1741, 1814, 1889, 1954, 2028, 2096, 2164, 2233, 2305, 2362]}, {"subject_area"=>"/Medicine and health sciences", "average_usage"=>[312, 547, 668, 769, 861, 953, 1046, 1135, 1224, 1307, 1388, 1464, 1536, 1606, 1676, 1744, 1812, 1882, 1954, 2020, 2089, 2155, 2218, 2282, 2344]}, {"subject_area"=>"/Medicine and health sciences/Pathology and laboratory medicine", "average_usage"=>[321, 553, 683, 785, 880, 973, 1072, 1162, 1249, 1336, 1425, 1504, 1574, 1642, 1711, 1785, 1852, 1923, 1987, 2050, 2129, 2192, 2259, 2325, 2393]}]}
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