Predicting the Location and Spatial Extent of Submerged Coral Reef Habitat in the Great Barrier Reef World Heritage Area, Australia
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{"title"=>"Predicting the Location and Spatial Extent of Submerged Coral Reef Habitat in the Great Barrier Reef World Heritage Area, Australia", "type"=>"journal", "authors"=>[{"first_name"=>"Tom", "last_name"=>"Bridge", "scopus_author_id"=>"24476931800"}, {"first_name"=>"Robin", "last_name"=>"Beaman", "scopus_author_id"=>"6603610330"}, {"first_name"=>"Terry", "last_name"=>"Done", "scopus_author_id"=>"6701646027"}, {"first_name"=>"Jody", "last_name"=>"Webster", "scopus_author_id"=>"7402197267"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "pui"=>"365953515", "doi"=>"10.1371/journal.pone.0048203", "sgr"=>"84868118729", "scopus"=>"2-s2.0-84868118729", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "pmid"=>"23118952"}, "id"=>"770c0150-be41-3e26-a72d-9e2519f9e12f", "abstract"=>"<sec><title>Aim</title><p>Coral reef communities occurring in deeper waters have received little research effort compared to their shallow-water counterparts, and even such basic information as their location and extent are currently unknown throughout most of the world. Using the Great Barrier Reef as a case study, habitat suitability modelling is used to predict the distribution of deep-water coral reef communities on the Great Barrier Reef, Australia. We test the effectiveness of a range of geophysical and environmental variables for predicting the location of deep-water coral reef communities on the Great Barrier Reef.</p></sec><sec><title>Location</title><p>Great Barrier Reef, Australia.</p></sec><sec><title>Methods</title><p>Maximum entropy modelling is used to identify the spatial extent of two broad communities of habitat-forming megabenthos phototrophs and heterotrophs. Models were generated using combinations of geophysical substrate properties derived from multibeam bathymetry and environmental data derived from Bio-ORACLE, combined with georeferenced occurrence records of mesophotic coral communities from autonomous underwater vehicle, remotely operated vehicle and SCUBA surveys. Model results are used to estimate the total amount of mesophotic coral reef habitat on the GBR.</p></sec><sec><title>Results</title><p>Our models predict extensive but previously undocumented coral communities occurring both along the continental shelf-edge of the Great Barrier Reef and also on submerged reefs inside the lagoon. Habitat suitability for phototrophs is highest on submerged reefs along the outer-shelf and the deeper flanks of emergent reefs inside the GBR lagoon, while suitability for heterotrophs is highest in the deep waters along the shelf-edge. Models using only geophysical variables consistently outperformed models incorporating environmental data for both phototrophs and heterotrophs.</p></sec><sec><title>Main Conclusion</title><p>Extensive submerged coral reef communities that are currently undocumented are likely to occur throughout the Great Barrier Reef. High-quality bathymetry data can be used to identify these reefs, which may play an important role in resilience of the GBR ecosystem to climate change.</p></sec>", "link"=>"http://www.mendeley.com/research/predicting-location-spatial-extent-submerged-coral-reef-habitat-great-barrier-reef-world-heritage-ar", "reader_count"=>82, "reader_count_by_academic_status"=>{"Unspecified"=>5, "Professor > Associate Professor"=>1, "Researcher"=>15, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>15, "Student > Postgraduate"=>3, "Student > Master"=>21, "Other"=>3, "Student > Bachelor"=>9, "Lecturer"=>1, "Professor"=>4}, "reader_count_by_user_role"=>{"Unspecified"=>5, "Professor > Associate Professor"=>1, "Researcher"=>15, "Student > Doctoral Student"=>5, "Student > Ph. D. Student"=>15, "Student > Postgraduate"=>3, "Student > Master"=>21, "Other"=>3, "Student > Bachelor"=>9, "Lecturer"=>1, "Professor"=>4}, "reader_count_by_subject_area"=>{"Engineering"=>2, "Unspecified"=>6, "Environmental Science"=>20, "Agricultural and Biological Sciences"=>42, "Medicine and Dentistry"=>1, "Decision Sciences"=>1, "Earth and Planetary Sciences"=>9, "Economics, Econometrics and Finance"=>1}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>2}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>1}, "Decision Sciences"=>{"Decision Sciences"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>9}, "Economics, Econometrics and Finance"=>{"Economics, Econometrics and Finance"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>42}, "Unspecified"=>{"Unspecified"=>6}, "Environmental Science"=>{"Environmental Science"=>20}}, "reader_count_by_country"=>{"Canada"=>1, "Brazil"=>2, "Mexico"=>1, "Australia"=>1, "Germany"=>1, "Spain"=>1}, "group_count"=>4}

Scopus | Further Information

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  • {"files"=>["https://ndownloader.figshare.com/files/552709"], "description"=>"<p>(a) GEO; (b) GEO-ENV; (c) ENV; and (d) BEST.</p>", "links"=>[], "tags"=>["suitability", "models", "heterotrophs"], "article_id"=>223202, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g005", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Habitat_suitability_models_for_heterotrophs_for_a_section_of_central_Great_Barrier_Reef_/223202", "title"=>"Habitat suitability models for heterotrophs for a section of central Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:53:22"}
  • {"files"=>["https://ndownloader.figshare.com/files/553010"], "description"=>"<p>GEO indicates the total area estimated.</p>", "links"=>[], "tags"=>["phototroph", "heterotroph", "communities", "lowest", "percentile", "thresholds", "km"], "article_id"=>223496, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.t001", "stats"=>{"downloads"=>1, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Estimated_habitat_area_for_phototroph_and_heterotroph_communities_using_both_Lowest_Presence_LPT_and_10_th_Percentile_thresholds_in_square_km_km_2_/223496", "title"=>"Estimated habitat area for phototroph and heterotroph communities using both Lowest Presence (LPT) and 10<sup>th</sup> Percentile thresholds in square km (km<sup>2</sup>).", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2012-10-30 00:58:16"}
  • {"files"=>["https://ndownloader.figshare.com/files/552078"], "description"=>"<p>Phototrophic communities shown in (a), (b), and heterotrophy communities in (c), (d). Photo (a) by Ed Robert at Mantis Reef, (b), (c) and (d) taken by <i>Sirius</i> autonomous underwater vehicle (Australian Centre for Field Robotics) at Hydrographers Passage.</p>", "links"=>[], "tags"=>["phototrophic", "heterotrophic", "mesophotic", "communities"], "article_id"=>222571, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g002", "stats"=>{"downloads"=>1, "page_views"=>31, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Examples_of_phototrophic_and_heterotrophic_mesophotic_communities_on_the_Great_Barrier_Reef_/222571", "title"=>"Examples of phototrophic and heterotrophic mesophotic communities on the Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:42:51"}
  • {"files"=>["https://ndownloader.figshare.com/files/551890"], "description"=>"<p>Yellow circles show the location of heterotroph communities and red triangles indicate phototroph communities.</p>", "links"=>[], "tags"=>["north-east", "australia", "occurrence", "records"], "article_id"=>222380, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g001", "stats"=>{"downloads"=>1, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Map_of_north_east_Australia_showing_location_of_occurrence_records_along_the_Great_Barrier_Reef_/222380", "title"=>"Map of north-east Australia showing location of occurrence records along the Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:39:40"}
  • {"files"=>["https://ndownloader.figshare.com/files/552312"], "description"=>"<p>(a) GEO; (b) GEO-ENV; (c) ENV; and (d) BEST.</p>", "links"=>[], "tags"=>["suitability", "models", "phototrophs"], "article_id"=>222804, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g003", "stats"=>{"downloads"=>0, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Habitat_suitability_models_for_phototrophs_for_a_section_of_central_Great_Barrier_Reef_/222804", "title"=>"Habitat suitability models for phototrophs for a section of central Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:46:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/552886"], "description"=>"<p>GEO models consistently predicted suitable habitat on the outer-shelf, and low suitability in shallower waters. Models using environmental data overfitted the predictions towards the location of occurrence records.</p>", "links"=>[], "tags"=>["heterotroph", "communities", "hydrographers"], "article_id"=>223382, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g006", "stats"=>{"downloads"=>1, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Predictions_of_heterotroph_communities_for_the_same_region_of_Hydrographers_Passage_central_Great_Barrier_Reef_/223382", "title"=>"Predictions of heterotroph communities for the same region of Hydrographers Passage, central Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:56:22"}
  • {"files"=>["https://ndownloader.figshare.com/files/294414", "https://ndownloader.figshare.com/files/294493"], "description"=>"<div><h3>Aim</h3><p>Coral reef communities occurring in deeper waters have received little research effort compared to their shallow-water counterparts, and even such basic information as their location and extent are currently unknown throughout most of the world. Using the Great Barrier Reef as a case study, habitat suitability modelling is used to predict the distribution of deep-water coral reef communities on the Great Barrier Reef, Australia. We test the effectiveness of a range of geophysical and environmental variables for predicting the location of deep-water coral reef communities on the Great Barrier Reef.</p> <h3>Location</h3><p>Great Barrier Reef, Australia.</p> <h3>Methods</h3><p>Maximum entropy modelling is used to identify the spatial extent of two broad communities of habitat-forming megabenthos phototrophs and heterotrophs. Models were generated using combinations of geophysical substrate properties derived from multibeam bathymetry and environmental data derived from Bio-ORACLE, combined with georeferenced occurrence records of mesophotic coral communities from autonomous underwater vehicle, remotely operated vehicle and SCUBA surveys. Model results are used to estimate the total amount of mesophotic coral reef habitat on the GBR.</p> <h3>Results</h3><p>Our models predict extensive but previously undocumented coral communities occurring both along the continental shelf-edge of the Great Barrier Reef and also on submerged reefs inside the lagoon. Habitat suitability for phototrophs is highest on submerged reefs along the outer-shelf and the deeper flanks of emergent reefs inside the GBR lagoon, while suitability for heterotrophs is highest in the deep waters along the shelf-edge. Models using only geophysical variables consistently outperformed models incorporating environmental data for both phototrophs and heterotrophs.</p> <h3>Main Conclusion</h3><p>Extensive submerged coral reef communities that are currently undocumented are likely to occur throughout the Great Barrier Reef. High-quality bathymetry data can be used to identify these reefs, which may play an important role in resilience of the GBR ecosystem to climate change.</p> </div>", "links"=>[], "tags"=>["predicting", "spatial", "submerged", "coral", "reef", "australia"], "article_id"=>117976, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0048203.s001", "https://dx.doi.org/10.1371/journal.pone.0048203.s002"], "stats"=>{"downloads"=>9, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Predicting_the_Location_and_Spatial_Extent_of_Submerged_Coral_Reef_Habitat_in_the_Great_Barrier_Reef_World_Heritage_Area_Australia__/117976", "title"=>"Predicting the Location and Spatial Extent of Submerged Coral Reef Habitat in the Great Barrier Reef World Heritage Area, Australia", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2012-10-30 02:12:56"}
  • {"files"=>["https://ndownloader.figshare.com/files/552547"], "description"=>"<p>GEO only and GEO-ENV both predicted suitable habitat along the outer-self, although model results were more accurate in areas with multibeam (right hand side) compared to singlebeam echosoundings (left). GEO also predicted higher habitat suitability on the deeper flanks of emergent reefs inside the GBR lagoon.</p>", "links"=>[], "tags"=>["phototroph", "communities", "hydrographers"], "article_id"=>223038, "categories"=>["Inorganic Chemistry", "Biological Sciences"], "users"=>["Tom Bridge", "Robin Beaman", "Terry Done", "Jody Webster"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0048203.g004", "stats"=>{"downloads"=>3, "page_views"=>3, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Predictions_of_phototroph_communities_in_the_Hydrographers_Passage_region_central_Great_Barrier_Reef_/223038", "title"=>"Predictions of phototroph communities in the Hydrographers Passage region, central Great Barrier Reef.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2012-10-30 00:50:38"}

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  • {"unique-ip"=>"11", "full-text"=>"12", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
  • {"unique-ip"=>"5", "full-text"=>"7", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
  • {"unique-ip"=>"3", "full-text"=>"2", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
  • {"unique-ip"=>"9", "full-text"=>"9", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
  • {"unique-ip"=>"7", "full-text"=>"7", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2018", "month"=>"11"}
  • {"unique-ip"=>"2", "full-text"=>"2", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"9"}
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  • {"unique-ip"=>"11", "full-text"=>"9", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
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Relative Metric

{"start_date"=>"2012-01-01T00:00:00Z", "end_date"=>"2012-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences", "average_usage"=>[322, 550, 671, 773, 864, 955, 1048, 1135, 1223, 1308, 1387, 1465, 1534, 1602, 1673, 1744, 1813, 1885, 1955, 2026, 2093, 2160, 2228, 2290, 2349]}, {"subject_area"=>"/Biology and life sciences/Ecology", "average_usage"=>[350, 552, 657, 754, 839, 932, 1023, 1103, 1197, 1274, 1359, 1436, 1499, 1564, 1640, 1726, 1794, 1865, 1933, 2021, 2101, 2181, 2239, 2324, 2376]}, {"subject_area"=>"/Biology and life sciences/Marine biology", "average_usage"=>[393, 576, 681, 795, 891, 951, 1043, 1122, 1188, 1269, 1349, 1425, 1502, 1554, 1599, 1644, 1710, 1791, 1866, 1938, 1996, 2070, 2136, 2218, 2286]}, {"subject_area"=>"/Biology and life sciences/Plant science", "average_usage"=>[329, 543, 667, 773, 865, 963, 1066, 1149, 1233, 1323, 1411, 1500, 1588, 1661, 1732, 1803, 1887, 1978, 2057, 2138, 2203, 2283, 2363, 2419, 2493]}, {"subject_area"=>"/Ecology and environmental sciences/Ecology", "average_usage"=>[347, 547, 641, 742, 836, 927, 1016, 1099, 1184, 1267, 1348, 1418, 1484, 1555, 1631, 1705, 1788, 1843, 1917, 1985, 2052, 2115, 2190, 2258, 2333]}, {"subject_area"=>"/Ecology and environmental sciences/Ecosystems", "average_usage"=>[354, 539, 635, 737, 816, 903, 966, 1043, 1126, 1198, 1283, 1347, 1427]}, {"subject_area"=>"/Ecology and environmental sciences/Habitats", "average_usage"=>[355, 533, 627, 707, 778, 856, 928, 1005, 1080, 1162, 1245, 1303, 1378, 1445, 1504, 1573, 1659, 1717, 1797, 1846, 1928, 1994, 2063, 2137, 2206]}, {"subject_area"=>"/Physical sciences", "average_usage"=>[304, 506, 616, 712, 799, 879, 968, 1052, 1134, 1212, 1284, 1357, 1427, 1494, 1557, 1621, 1689, 1756, 1823, 1883, 1944, 1997, 2056, 2118, 2171]}, {"subject_area"=>"/Physical sciences/Mathematics", "average_usage"=>[325, 522, 627, 718, 804, 884, 969, 1052, 1131, 1207, 1277, 1346, 1415, 1478, 1542, 1605, 1663, 1723, 1776, 1839, 1895, 1955, 2008, 2066, 2123]}]}
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