Quantitative Digital Imaging of Banana Growth Suppression by Plant Parasitic Nematodes
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{"title"=>"Quantitative Digital Imaging of Banana Growth Suppression by Plant Parasitic Nematodes", "type"=>"journal", "authors"=>[{"first_name"=>"Hugh", "last_name"=>"Roderick", "scopus_author_id"=>"55125260100"}, {"first_name"=>"Elvis", "last_name"=>"Mbiru", "scopus_author_id"=>"55540582900"}, {"first_name"=>"Danny", "last_name"=>"Coyne", "scopus_author_id"=>"7005444087"}, {"first_name"=>"Leena", "last_name"=>"Tripathi", "scopus_author_id"=>"7003480616"}, {"first_name"=>"Howard J.", "last_name"=>"Atkinson", "scopus_author_id"=>"7101883677"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"23285286", "sgr"=>"84871684991", "doi"=>"10.1371/journal.pone.0053355", "scopus"=>"2-s2.0-84871684991", "pui"=>"368013064", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "issn"=>"19326203"}, "id"=>"c79e4ef8-d925-378e-9e66-d6ca09d6429a", "abstract"=>"A digital camera fitted with a hemispherical lens was used to generate canopy leaf area index (LAI) values for a banana (Musa spp.) field trial with the aim of establishing a method for monitoring stresses on tall crop plants. The trial in Uganda consisted of two cultivars susceptible to nematodes, a plantain, Gonja manjaya and an East African Highland banana, Mbwazirume, plus a nematode resistant dessert banana, Yangambi km5. A comparative approach included adding a mixed population of Radopholus similis, Helicotylenchus multicinctus and Meloidogyne spp. to the soil around half the plants of each cultivar prior to field planting. Measurements of LAI were made fortnightly from 106 days post-planting over two successive cropping cycles. The highest mean LAI during the first cycle for Gonja manjaya was suppressed to 74.8+/-3.5% by the addition of nematodes, while for Mbwazirume the values were reduced to 71.1+/-1.9%. During the second cycle these values were 69.2+/-2.2% and 72.2+/-2.7%, respectively. Reductions in LAI values were validated as due to the biotic stress by assessing nematode numbers in roots and the necrosis they caused at each of two harvests and the relationship is described. Yield losses, including a component due to toppled plants, were 35.3% and 55.3% for Gonja manjaya and 31.4% and 55.8% for Mbwazirume, at first and second harvests respectively. Yangambi km5 showed no decrease in LAI and yield in the presence of nematodes at both harvests. LAI estimated by hemispherical photography provided a rapid basis for detecting biotic growth checks by nematodes on bananas, and demonstrated the potential of the approach for studies of growth checks to other tall crop plants caused by biotic or abiotic stresses.", "link"=>"http://www.mendeley.com/research/quantitative-digital-imaging-banana-growth-suppression-plant-parasitic-nematodes", "reader_count"=>19, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Ph. D. Student"=>2, "Student > Postgraduate"=>1, "Student > Master"=>4, "Other"=>1, "Student > Bachelor"=>3, "Lecturer > Senior Lecturer"=>1, "Professor"=>3}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Ph. D. Student"=>2, "Student > Postgraduate"=>1, "Student > Master"=>4, "Other"=>1, "Student > Bachelor"=>3, "Lecturer > Senior Lecturer"=>1, "Professor"=>3}, "reader_count_by_subject_area"=>{"Engineering"=>2, "Environmental Science"=>2, "Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>10, "Social Sciences"=>1, "Earth and Planetary Sciences"=>1, "Economics, Econometrics and Finance"=>1}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>2}, "Social Sciences"=>{"Social Sciences"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>1}, "Economics, Econometrics and Finance"=>{"Economics, Econometrics and Finance"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>10}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Environmental Science"=>{"Environmental Science"=>2}}, "reader_count_by_country"=>{"Colombia"=>1, "Ethiopia"=>1}, "group_count"=>1}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/516264"], "description"=>"<p>The impact of the addition of nematodes prior to transplantation into the field on the number of standing (S) and toppled (T) banana plants during two crop cycles.</p>", "links"=>[], "tags"=>["nematodes", "transplantation", "toppled", "plants"], "article_id"=>186754, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.t001", "stats"=>{"downloads"=>0, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_impact_of_the_addition_of_nematodes_prior_to_transplantation_into_the_field_on_the_number_of_standing_S_and_toppled_T_banana_plants_during_two_crop_cycles_/186754", "title"=>"The impact of the addition of nematodes prior to transplantation into the field on the number of standing (S) and toppled (T) banana plants during two crop cycles.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-19 17:51:57"}
  • {"files"=>["https://ndownloader.figshare.com/files/516234"], "description"=>"***<p>P<0.001;</p>**<p>P<0.01;</p>*<p>P<0.05; t-test comparison between the two treatments for each cultivar at harvest. Each mean (± SEM) is based on 83–138 and 27–137 plants for the first and second harvests, respectively.</p>", "links"=>[], "tags"=>["nematodes", "transplantation", "days", "pseudostem", "girth"], "article_id"=>186724, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.t002", "stats"=>{"downloads"=>0, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_impact_of_the_addition_of_nematodes_prior_to_transplantation_into_the_field_on_days_to_harvest_plant_height_at_harvest_and_pseudostem_girth_at_harvest_for_two_crop_cycles_/186724", "title"=>"The impact of the addition of nematodes prior to transplantation into the field on days to harvest, plant height at harvest and pseudostem girth at harvest for two crop cycles.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-19 17:51:45"}
  • {"files"=>["https://ndownloader.figshare.com/files/515909"], "description"=>"<p>A cubic regression curve is fitted for the relationship for the cultivars Gonja (•) and Mbwazirume (▪) between LAI and mean nematode density for values within one of up to five nematode density classes (0; 1–<1,000; 1,000–<10,000; 10,000–<100,000 and 100,000 or more/100 g roots) for two harvests for both plants to which nematodes were and were not added prior to planting. All nematode density classes for which there is significant percentage reduction in LAI relative to when no nematodes were recovered from roots is shown for both cultivars (*–P<0.05; ***–P<0.001, Oneway Anova with <i>apriori</i> contrasts). The values in parenthesis are the number of values associated with each mean; (n), Gonja and [n] Mbwazirume.</p>", "links"=>[], "tags"=>["lai", "nematode"], "article_id"=>186406, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.g003", "stats"=>{"downloads"=>1, "page_views"=>2, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Relationship_between_LAI_and_nematode_density_/186406", "title"=>"Relationship between LAI and nematode density.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-19 17:49:57"}
  • {"files"=>["https://ndownloader.figshare.com/files/515690"], "description"=>"<p>Mean canopy LAI measurements of four replicate plots of 36 banana plants per treatment of the susceptible cultivars Gonja manjaya and Mbwazirume and the resistant cultivar Yangambi km5 across two growth cycles with or without nematode addition of a mixed population of 5,500 nematodes per plant before transfer to the field. Error bars indicate ± SEM (n = 36) and the first and second harvest periods are indicated by open and closed bars, respectively. Adjacent images indicate example LAI values at the minimum, median and maximum values for each banana cultivar.</p>", "links"=>[], "tags"=>["hemispherical"], "article_id"=>186182, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.g001", "stats"=>{"downloads"=>0, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Leaf_area_index_LAI_measured_by_hemispherical_digital_photography_/186182", "title"=>"Leaf area index (LAI) measured by hemispherical digital photography.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-19 17:48:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/516089"], "description"=>"<p>Mean values for each treatment for the three banana cultivars at first and second harvest. Values presented are back transformed from log necrosis values. Error bars indicate ±SEM (Harvest 1 n≥120; Harvest 2 n≥95)<b>.</b></p>", "links"=>[], "tags"=>["necrosis"], "article_id"=>186588, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.g005", "stats"=>{"downloads"=>3, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Percentage_root_necrosis_at_harvest_/186588", "title"=>"Percentage root necrosis at harvest.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-19 17:51:01"}
  • {"files"=>["https://ndownloader.figshare.com/files/515773"], "description"=>"<p>Mean numbers per 100 g root of each of the three added nematode species recovered at first and second harvest on each of the three banana cultivars. Error bars indicate ± SEM (Harvest 1 n = 144; Harvest 2 n = 12). Univariate analysis was used to detect differences between nematodes added (+) and not added (–) treatments (***–P<0.001).</p>", "links"=>[], "tags"=>["recovered"], "article_id"=>186269, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.g002", "stats"=>{"downloads"=>1, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Nematodes_recovered_at_harvest_/186269", "title"=>"Nematodes recovered at harvest.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-19 17:49:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/516026"], "description"=>"<p>Mean values for each treatment for the three banana cultivars at first and second harvest. Error bars indicate ± SEM (Harvest 1 n≥120; Harvest 2 n≥95). Univariate analysis was used to detect significant differences (***–P<0.001) between bunch weights of nematodes added and not added treatments at first harvest (FH) and second harvest (SH).</p>", "links"=>[], "tags"=>["plant biology", "microbiology"], "article_id"=>186526, "categories"=>["Microbiology", "Plant Biology"], "users"=>["Hugh Roderick", "Elvis Mbiru", "Danny Coyne", "Leena Tripathi", "Howard J. Atkinson"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0053355.g004", "stats"=>{"downloads"=>1, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Harvested_banana_bunch_weights_/186526", "title"=>"Harvested banana bunch weights.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-19 17:50:37"}

PMC Usage Stats | Further Information

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  • {"unique-ip"=>"7", "full-text"=>"6", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"2", "full-text"=>"2", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"3"}
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  • {"unique-ip"=>"4", "full-text"=>"4", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"6"}
  • {"unique-ip"=>"1", "full-text"=>"1", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
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  • {"unique-ip"=>"6", "full-text"=>"6", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
  • {"unique-ip"=>"9", "full-text"=>"7", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"12", "full-text"=>"13", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}

Relative Metric

{"start_date"=>"2012-01-01T00:00:00Z", "end_date"=>"2012-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Agriculture", "average_usage"=>[323, 536, 657, 751, 847, 939, 1032, 1114, 1201, 1279, 1355, 1431, 1516, 1582, 1656, 1719, 1791, 1848, 1919, 2000, 2068, 2127, 2208, 2281, 2359]}, {"subject_area"=>"/Biology and life sciences/Organisms", "average_usage"=>[331, 557, 677, 777, 868, 960, 1050, 1136, 1223, 1307, 1390, 1466, 1536, 1603, 1673, 1741, 1814, 1889, 1954, 2028, 2096, 2164, 2233, 2305, 2362]}, {"subject_area"=>"/Medicine and health sciences", "average_usage"=>[312, 547, 668, 769, 861, 953, 1046, 1135, 1224, 1307, 1388, 1464, 1536, 1606, 1676, 1744, 1812, 1882, 1954, 2020, 2089, 2155, 2218, 2282, 2344]}, {"subject_area"=>"/Medicine and health sciences/Parasitic diseases", "average_usage"=>[357, 723, 872, 1005, 1118, 1230, 1343, 1452, 1559, 1664, 1758, 1833, 1919, 1999, 2076, 2152, 2223, 2295, 2359, 2437, 2528, 2600, 2688, 2743, 2789]}]}
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