The Genome Sequences of Cellulomonas fimi and “Cellvibrio gilvus” Reveal the Cellulolytic Strategies of Two Facultative Anaerobes, Transfer of “Cellvibrio gilvus” to the Genus Cellulomonas, and Proposal of Cellulomonas gilvus sp. nov
Events
Loading … Spinner

Mendeley | Further Information

{"title"=>"The Genome Sequences of Cellulomonas fimi and \"Cellvibrio gilvus\" Reveal the Cellulolytic Strategies of Two Facultative Anaerobes, Transfer of \"Cellvibrio gilvus\" to the Genus Cellulomonas, and Proposal of Cellulomonas gilvus sp. nov", "type"=>"journal", "authors"=>[{"first_name"=>"Melissa R.", "last_name"=>"Christopherson", "scopus_author_id"=>"35083337500"}, {"first_name"=>"Garret", "last_name"=>"Suen", "scopus_author_id"=>"15119954100"}, {"first_name"=>"Shanti", "last_name"=>"Bramhacharya", "scopus_author_id"=>"54895186500"}, {"first_name"=>"Kelsea A.", "last_name"=>"Jewell", "scopus_author_id"=>"24481050800"}, {"first_name"=>"Frank O.", "last_name"=>"Aylward", "scopus_author_id"=>"36855605000"}, {"first_name"=>"David", "last_name"=>"Mead", "scopus_author_id"=>"7103176903"}, {"first_name"=>"Phillip J.", "last_name"=>"Brumm", "scopus_author_id"=>"36880429700"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"pui"=>"368116128", "issn"=>"19326203", "doi"=>"10.1371/journal.pone.0053954", "scopus"=>"2-s2.0-84872286767", "pmid"=>"23342046", "sgr"=>"84872286767"}, "id"=>"c06d45ac-0aff-3582-9482-a7710991c282", "abstract"=>"Actinobacteria in the genus Cellulomonas are the only known and reported cellulolytic facultative anaerobes. To better understand the cellulolytic strategy employed by these bacteria, we sequenced the genome of the Cellulomonas fimi ATCC 484(T). For comparative purposes, we also sequenced the genome of the aerobic cellulolytic \"Cellvibrio gilvus\" ATCC 13127(T). An initial analysis of these genomes using phylogenetic and whole-genome comparison revealed that \"Cellvibrio gilvus\" belongs to the genus Cellulomonas. We thus propose to assign \"Cellvibrio gilvus\" to the genus Cellulomonas. A comparative genomics analysis between these two Cellulomonas genome sequences and the recently completed genome for Cellulomonas flavigena ATCC 482(T) showed that these cellulomonads do not encode cellulosomes but appear to degrade cellulose by secreting multi-domain glycoside hydrolases. Despite the minimal number of carbohydrate-active enzymes encoded by these genomes, as compared to other known cellulolytic organisms, these bacteria were found to be proficient at degrading and utilizing a diverse set of carbohydrates, including crystalline cellulose. Moreover, they also encode for proteins required for the fermentation of hexose and xylose sugars into products such as ethanol. Finally, we found relatively few significant differences between the predicted carbohydrate-active enzymes encoded by these Cellulomonas genomes, in contrast to previous studies reporting differences in physiological approaches for carbohydrate degradation. Our sequencing and analysis of these genomes sheds light onto the mechanism through which these facultative anaerobes degrade cellulose, suggesting that the sequenced cellulomonads use secreted, multidomain enzymes to degrade cellulose in a way that is distinct from known anaerobic cellulolytic strategies.", "link"=>"http://www.mendeley.com/research/genome-sequences-cellulomonas-fimi-cellvibrio-gilvus-reveal-cellulolytic-strategies-two-facultative", "reader_count"=>50, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>1, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>16, "Student > Postgraduate"=>1, "Student > Master"=>8, "Other"=>4, "Student > Bachelor"=>8}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>1, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>16, "Student > Postgraduate"=>1, "Student > Master"=>8, "Other"=>4, "Student > Bachelor"=>8}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Engineering"=>1, "Environmental Science"=>2, "Biochemistry, Genetics and Molecular Biology"=>9, "Agricultural and Biological Sciences"=>31, "Design"=>1, "Chemistry"=>1, "Immunology and Microbiology"=>1, "Chemical Engineering"=>1}, "reader_count_by_subdiscipline"=>{"Design"=>{"Design"=>1}, "Engineering"=>{"Engineering"=>1}, "Chemistry"=>{"Chemistry"=>1}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>31}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>9}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>2}, "Chemical Engineering"=>{"Chemical Engineering"=>1}}, "reader_count_by_country"=>{"United States"=>1, "United Kingdom"=>1, "Mexico"=>1}, "group_count"=>1}

Scopus | Further Information

{"@_fa"=>"true", "link"=>[{"@_fa"=>"true", "@ref"=>"self", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84872286767"}, {"@_fa"=>"true", "@ref"=>"author-affiliation", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84872286767?field=author,affiliation"}, {"@_fa"=>"true", "@ref"=>"scopus", "@href"=>"https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84872286767&origin=inward"}, {"@_fa"=>"true", "@ref"=>"scopus-citedby", "@href"=>"https://www.scopus.com/inward/citedby.uri?partnerID=HzOxMe3b&scp=84872286767&origin=inward"}], "prism:url"=>"https://api.elsevier.com/content/abstract/scopus_id/84872286767", "dc:identifier"=>"SCOPUS_ID:84872286767", "eid"=>"2-s2.0-84872286767", "dc:title"=>"The Genome Sequences of Cellulomonas fimi and \"Cellvibrio gilvus\" Reveal the Cellulolytic Strategies of Two Facultative Anaerobes, Transfer of \"Cellvibrio gilvus\" to the Genus Cellulomonas, and Proposal of Cellulomonas gilvus sp. nov", "dc:creator"=>"Christopherson M.", "prism:publicationName"=>"PLoS ONE", "prism:eIssn"=>"19326203", "prism:volume"=>"8", "prism:issueIdentifier"=>"1", "prism:pageRange"=>nil, "prism:coverDate"=>"2013-01-14", "prism:coverDisplayDate"=>"14 January 2013", "prism:doi"=>"10.1371/journal.pone.0053954", "citedby-count"=>"32", "affiliation"=>[{"@_fa"=>"true", "affilname"=>"University of Wisconsin-Madison", "affiliation-city"=>"Madison", "affiliation-country"=>"United States"}], "pubmed-id"=>"23342046", "prism:aggregationType"=>"Journal", "subtype"=>"ar", "subtypeDescription"=>"Article", "article-number"=>"e53954", "source-id"=>"10600153309", "openaccess"=>"1", "openaccessFlag"=>true}

Facebook

  • {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fplosone%2Farticle%3Fid%3D10.1371%252Fjournal.pone.0053954", "share_count"=>0, "like_count"=>0, "comment_count"=>0, "click_count"=>0, "total_count"=>0}

Counter

  • {"month"=>"1", "year"=>"2013", "pdf_views"=>"36", "xml_views"=>"1", "html_views"=>"240"}
  • {"month"=>"2", "year"=>"2013", "pdf_views"=>"20", "xml_views"=>"2", "html_views"=>"86"}
  • {"month"=>"3", "year"=>"2013", "pdf_views"=>"21", "xml_views"=>"0", "html_views"=>"120"}
  • {"month"=>"4", "year"=>"2013", "pdf_views"=>"20", "xml_views"=>"1", "html_views"=>"177"}
  • {"month"=>"5", "year"=>"2013", "pdf_views"=>"17", "xml_views"=>"1", "html_views"=>"132"}
  • {"month"=>"6", "year"=>"2013", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"97"}
  • {"month"=>"7", "year"=>"2013", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"130"}
  • {"month"=>"8", "year"=>"2013", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"108"}
  • {"month"=>"9", "year"=>"2013", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"134"}
  • {"month"=>"10", "year"=>"2013", "pdf_views"=>"17", "xml_views"=>"3", "html_views"=>"122"}
  • {"month"=>"11", "year"=>"2013", "pdf_views"=>"8", "xml_views"=>"3", "html_views"=>"78"}
  • {"month"=>"12", "year"=>"2013", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"23"}
  • {"month"=>"1", "year"=>"2014", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"35"}
  • {"month"=>"2", "year"=>"2014", "pdf_views"=>"10", "xml_views"=>"0", "html_views"=>"46"}
  • {"month"=>"3", "year"=>"2014", "pdf_views"=>"5", "xml_views"=>"4", "html_views"=>"87"}
  • {"month"=>"4", "year"=>"2014", "pdf_views"=>"7", "xml_views"=>"3", "html_views"=>"102"}
  • {"month"=>"5", "year"=>"2014", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"101"}
  • {"month"=>"6", "year"=>"2014", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"90"}
  • {"month"=>"7", "year"=>"2014", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"98"}
  • {"month"=>"8", "year"=>"2014", "pdf_views"=>"3", "xml_views"=>"2", "html_views"=>"73"}
  • {"month"=>"9", "year"=>"2014", "pdf_views"=>"15", "xml_views"=>"1", "html_views"=>"71"}
  • {"month"=>"10", "year"=>"2014", "pdf_views"=>"13", "xml_views"=>"4", "html_views"=>"103"}
  • {"month"=>"11", "year"=>"2014", "pdf_views"=>"12", "xml_views"=>"2", "html_views"=>"97"}
  • {"month"=>"12", "year"=>"2014", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"87"}
  • {"month"=>"1", "year"=>"2015", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"43"}
  • {"month"=>"2", "year"=>"2015", "pdf_views"=>"2", "xml_views"=>"0", "html_views"=>"34"}
  • {"month"=>"3", "year"=>"2015", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"49"}
  • {"month"=>"4", "year"=>"2015", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"48"}
  • {"month"=>"5", "year"=>"2015", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"6", "year"=>"2015", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"58"}
  • {"month"=>"7", "year"=>"2015", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"78"}
  • {"month"=>"8", "year"=>"2015", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"50"}
  • {"month"=>"9", "year"=>"2015", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"61"}
  • {"month"=>"10", "year"=>"2015", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"84"}
  • {"month"=>"11", "year"=>"2015", "pdf_views"=>"13", "xml_views"=>"1", "html_views"=>"111"}
  • {"month"=>"12", "year"=>"2015", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"94"}
  • {"month"=>"1", "year"=>"2016", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"69"}
  • {"month"=>"2", "year"=>"2016", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"68"}
  • {"month"=>"3", "year"=>"2016", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"64"}
  • {"month"=>"4", "year"=>"2016", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"63"}
  • {"month"=>"5", "year"=>"2016", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"33"}
  • {"month"=>"6", "year"=>"2016", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"25"}
  • {"month"=>"7", "year"=>"2016", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"33"}
  • {"month"=>"8", "year"=>"2016", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"34"}
  • {"month"=>"9", "year"=>"2016", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"55"}
  • {"month"=>"10", "year"=>"2016", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"101"}
  • {"month"=>"11", "year"=>"2016", "pdf_views"=>"3", "xml_views"=>"0", "html_views"=>"117"}
  • {"month"=>"12", "year"=>"2016", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"81"}
  • {"month"=>"1", "year"=>"2017", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"100"}
  • {"month"=>"2", "year"=>"2017", "pdf_views"=>"18", "xml_views"=>"2", "html_views"=>"90"}
  • {"month"=>"3", "year"=>"2017", "pdf_views"=>"5", "xml_views"=>"1", "html_views"=>"117"}
  • {"month"=>"4", "year"=>"2017", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"122"}
  • {"month"=>"5", "year"=>"2017", "pdf_views"=>"4", "xml_views"=>"1", "html_views"=>"98"}
  • {"month"=>"6", "year"=>"2017", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"140"}
  • {"month"=>"7", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"4", "html_views"=>"122"}
  • {"month"=>"8", "year"=>"2017", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"110"}
  • {"month"=>"9", "year"=>"2017", "pdf_views"=>"9", "xml_views"=>"1", "html_views"=>"70"}
  • {"month"=>"10", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"1", "html_views"=>"137"}
  • {"month"=>"11", "year"=>"2017", "pdf_views"=>"8", "xml_views"=>"1", "html_views"=>"140"}
  • {"month"=>"12", "year"=>"2017", "pdf_views"=>"8", "xml_views"=>"7", "html_views"=>"108"}
  • {"month"=>"1", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"1", "html_views"=>"58"}
  • {"month"=>"2", "year"=>"2018", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"71"}
  • {"month"=>"3", "year"=>"2018", "pdf_views"=>"8", "xml_views"=>"5", "html_views"=>"53"}
  • {"month"=>"4", "year"=>"2018", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"28"}
  • {"month"=>"5", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"1", "html_views"=>"29"}
  • {"month"=>"6", "year"=>"2018", "pdf_views"=>"2", "xml_views"=>"1", "html_views"=>"23"}
  • {"month"=>"7", "year"=>"2018", "pdf_views"=>"5", "xml_views"=>"6", "html_views"=>"11"}
  • {"month"=>"8", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"1", "html_views"=>"10"}
  • {"month"=>"9", "year"=>"2018", "pdf_views"=>"8", "xml_views"=>"1", "html_views"=>"22"}
  • {"month"=>"10", "year"=>"2018", "pdf_views"=>"3", "xml_views"=>"3", "html_views"=>"14"}
  • {"month"=>"11", "year"=>"2018", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"26"}
  • {"month"=>"12", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"18"}
  • {"month"=>"1", "year"=>"2019", "pdf_views"=>"5", "xml_views"=>"6", "html_views"=>"11"}
  • {"month"=>"2", "year"=>"2019", "pdf_views"=>"7", "xml_views"=>"1", "html_views"=>"14"}
  • {"month"=>"3", "year"=>"2019", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"14"}
  • {"month"=>"4", "year"=>"2019", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"26"}
  • {"month"=>"5", "year"=>"2019", "pdf_views"=>"4", "xml_views"=>"2", "html_views"=>"10"}
  • {"month"=>"6", "year"=>"2019", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"7"}
  • {"month"=>"7", "year"=>"2019", "pdf_views"=>"14", "xml_views"=>"1", "html_views"=>"18"}
  • {"month"=>"8", "year"=>"2019", "pdf_views"=>"18", "xml_views"=>"1", "html_views"=>"12"}
  • {"month"=>"9", "year"=>"2019", "pdf_views"=>"4", "xml_views"=>"2", "html_views"=>"8"}

Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/276888", "https://ndownloader.figshare.com/files/276980", "https://ndownloader.figshare.com/files/277022", "https://ndownloader.figshare.com/files/277070", "https://ndownloader.figshare.com/files/277143", "https://ndownloader.figshare.com/files/277174", "https://ndownloader.figshare.com/files/277214"], "description"=>"<div><p>Actinobacteria in the genus <em>Cellulomonas</em> are the only known and reported cellulolytic facultative anaerobes. To better understand the cellulolytic strategy employed by these bacteria, we sequenced the genome of the <em>Cellulomonas fimi</em> ATCC 484<sup>T</sup>. For comparative purposes, we also sequenced the genome of the aerobic cellulolytic “<em>Cellvibrio gilvus”</em> ATCC 13127<sup>T</sup>. An initial analysis of these genomes using phylogenetic and whole-genome comparison revealed that “<em>Cellvibrio gilvus”</em> belongs to the genus <em>Cellulomonas</em>. We thus propose to assign “<em>Cellvibrio gilvus”</em> to the genus <em>Cellulomonas</em>. A comparative genomics analysis between these two <em>Cellulomonas</em> genome sequences and the recently completed genome for <em>Cellulomonas flavigena</em> ATCC 482<sup>T</sup> showed that these cellulomonads do not encode cellulosomes but appear to degrade cellulose by secreting multi-domain glycoside hydrolases. Despite the minimal number of carbohydrate-active enzymes encoded by these genomes, as compared to other known cellulolytic organisms, these bacteria were found to be proficient at degrading and utilizing a diverse set of carbohydrates, including crystalline cellulose. Moreover, they also encode for proteins required for the fermentation of hexose and xylose sugars into products such as ethanol. Finally, we found relatively few significant differences between the predicted carbohydrate-active enzymes encoded by these <em>Cellulomonas</em> genomes, in contrast to previous studies reporting differences in physiological approaches for carbohydrate degradation. Our sequencing and analysis of these genomes sheds light onto the mechanism through which these facultative anaerobes degrade cellulose, suggesting that the sequenced cellulomonads use secreted, multidomain enzymes to degrade cellulose in a way that is distinct from known anaerobic cellulolytic strategies.</p> </div>", "links"=>[], "tags"=>["genome", "sequences", "cellulolytic", "strategies", "facultative", "genus", "nov"], "article_id"=>114574, "categories"=>["Biological Sciences", "Biochemistry", "Microbiology"], "users"=>["Melissa R. Christopherson", "Garret Suen", "Shanti Bramhacharya", "Kelsea A. Jewell", "Frank O. Aylward", "David Mead", "Phillip J. Brumm"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0053954.s001", "https://dx.doi.org/10.1371/journal.pone.0053954.s002", "https://dx.doi.org/10.1371/journal.pone.0053954.s003", "https://dx.doi.org/10.1371/journal.pone.0053954.s004", "https://dx.doi.org/10.1371/journal.pone.0053954.s005", "https://dx.doi.org/10.1371/journal.pone.0053954.s006", "https://dx.doi.org/10.1371/journal.pone.0053954.s007"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/The_Genome_Sequences_of_Cellulomonas_fimi_and_Cellvibrio_gilvus_Reveal_the_Cellulolytic_Strategies_of_Two_Facultative_Anaerobes_Transfer_of_Cellvibrio_gilvus_to_the_Genus_Cellulomonas_and_Proposal_of_Cellulomonas_gilvus_sp_nov__/114574", "title"=>"The Genome Sequences of <em>Cellulomonas fimi</em> and “<em>Cellvibrio gilvus”</em> Reveal the Cellulolytic Strategies of Two Facultative Anaerobes, Transfer of “<em>Cellvibrio gilvus</em>” to the Genus <em>Cellulomonas</em>, and Proposal of <em>Cellulomonas gilvus</em> sp. nov", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2013-01-14 01:16:14"}
  • {"files"=>["https://ndownloader.figshare.com/files/507897"], "description"=>"<p>Rooted Bayesian trees based on 16S rRNA gene sequences (A) and 32 concatenated house-keeping protein sequences (B) showing the relationship between “<i>Cellvibrio gilvus”</i> and sequenced bacterial genomes in the phylum Actinobacteria and Gammaproteobacteria and species within the <i>Cellulomonas</i> and <i>Cellvibrio</i> genera. Bar, 0.1 substitutions per amino acid position.</p>", "links"=>[], "tags"=>["microbiology", "Computational biology", "Biochemistry"], "article_id"=>178383, "categories"=>["Biological Sciences", "Biochemistry", "Microbiology"], "users"=>["Melissa R. Christopherson", "Garret Suen", "Shanti Bramhacharya", "Kelsea A. Jewell", "Frank O. Aylward", "David Mead", "Phillip J. Brumm"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0053954.g001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_placement_of_Cellvibrio_gilvus_/178383", "title"=>"Phylogenetic placement of “<i>Cellvibrio gilvus</i>”.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-01-14 02:19:43"}
  • {"files"=>["https://ndownloader.figshare.com/files/507980"], "description"=>"<p>The total numbers of shared proteins between the three genomes were tabulated and presented as a Venn diagram in (A). The unique proteins from each species were analyzed using the KEGG database (B).</p>", "links"=>[], "tags"=>["genomes", "conducted"], "article_id"=>178475, "categories"=>["Biological Sciences", "Biochemistry", "Microbiology"], "users"=>["Melissa R. Christopherson", "Garret Suen", "Shanti Bramhacharya", "Kelsea A. Jewell", "Frank O. Aylward", "David Mead", "Phillip J. Brumm"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0053954.g002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ortholog_analysis_of_the_three_Cellulomonas_genomes_conducted_using_OrthoMCL_/178475", "title"=>"Ortholog analysis of the three <i>Cellulomonas</i> genomes conducted using OrthoMCL.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-01-14 02:21:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/508057"], "description"=>"α<p>Sum of sequences from GH5, GH6, GH9, GH48, and GH94 families.</p>β<p>Sum of sequences from GH10, GH11, and GH30 families.</p>γ<p>Sum of sequences from GH16, GH55, GH64 and GT2 families.</p>", "links"=>[], "tags"=>["genome", "sequences", "cellvibrio", "cellulomonas"], "article_id"=>178543, "categories"=>["Biological Sciences", "Biochemistry", "Microbiology"], "users"=>["Melissa R. Christopherson", "Garret Suen", "Shanti Bramhacharya", "Kelsea A. Jewell", "Frank O. Aylward", "David Mead", "Phillip J. Brumm"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0053954.t001"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Statistical_features_of_the_genome_sequences_of_Cellvibrio_japonicus_Cellvibrio_gilvus_Cellulomonas_fimi_and_Cellulomonas_flavigena_/178543", "title"=>"Statistical features of the genome sequences of Cellvibrio japonicus, Cellvibrio gilvus, Cellulomonas fimi, and Cellulomonas flavigena.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-01-14 02:22:23"}

PMC Usage Stats | Further Information

  • {"unique-ip"=>"18", "full-text"=>"16", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"7"}
  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2014", "month"=>"8"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2014", "month"=>"9"}
  • {"unique-ip"=>"14", "full-text"=>"13", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"15", "full-text"=>"16", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"11"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"12"}
  • {"unique-ip"=>"16", "full-text"=>"14", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"1"}
  • {"unique-ip"=>"13", "full-text"=>"10", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2015", "month"=>"11"}
  • {"unique-ip"=>"10", "full-text"=>"12", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
  • {"unique-ip"=>"8", "full-text"=>"8", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"3"}
  • {"unique-ip"=>"15", "full-text"=>"15", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2016", "month"=>"4"}
  • {"unique-ip"=>"8", "full-text"=>"6", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"5"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2016", "month"=>"6"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
  • {"unique-ip"=>"15", "full-text"=>"11", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"8"}
  • {"unique-ip"=>"7", "full-text"=>"6", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2016", "month"=>"9"}
  • {"unique-ip"=>"6", "full-text"=>"6", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"25", "full-text"=>"30", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"13", "full-text"=>"14", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
  • {"unique-ip"=>"11", "full-text"=>"12", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
  • {"unique-ip"=>"9", "full-text"=>"11", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2017", "month"=>"2"}
  • {"unique-ip"=>"16", "full-text"=>"13", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"16", "full-text"=>"18", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"7", "full-text"=>"11", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"8", "full-text"=>"8", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"11", "full-text"=>"13", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"33", "full-text"=>"35", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"21", "full-text"=>"19", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}
  • {"unique-ip"=>"20", "full-text"=>"20", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"14", "full-text"=>"15", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2017", "month"=>"12"}
  • {"unique-ip"=>"16", "full-text"=>"17", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
  • {"unique-ip"=>"11", "full-text"=>"13", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"3"}
  • {"unique-ip"=>"26", "full-text"=>"27", "pdf"=>"6", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"1"}
  • {"unique-ip"=>"17", "full-text"=>"17", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"9"}
  • {"unique-ip"=>"19", "full-text"=>"21", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"25", "full-text"=>"27", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"14", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
  • {"unique-ip"=>"13", "full-text"=>"14", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
  • {"unique-ip"=>"21", "full-text"=>"16", "pdf"=>"7", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
  • {"unique-ip"=>"12", "full-text"=>"13", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
  • {"unique-ip"=>"26", "full-text"=>"26", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
  • {"unique-ip"=>"21", "full-text"=>"25", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
  • {"unique-ip"=>"42", "full-text"=>"53", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2018", "month"=>"11"}
  • {"unique-ip"=>"18", "full-text"=>"19", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
  • {"unique-ip"=>"32", "full-text"=>"40", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
  • {"unique-ip"=>"36", "full-text"=>"43", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"35", "full-text"=>"40", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}
  • {"unique-ip"=>"28", "full-text"=>"29", "pdf"=>"10", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"8"}

Relative Metric

{"start_date"=>"2013-01-01T00:00:00Z", "end_date"=>"2013-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Biochemistry", "average_usage"=>[266, 468, 593, 703, 804, 903, 993, 1084, 1171, 1256, 1339, 1422, 1492]}, {"subject_area"=>"/Biology and life sciences/Molecular biology", "average_usage"=>[272, 466, 589, 702, 806, 903, 995, 1086, 1176, 1258, 1347, 1422, 1493]}, {"subject_area"=>"/Physical sciences/Chemistry", "average_usage"=>[247, 429, 544, 647, 747, 842, 929, 1012, 1099, 1179, 1263, 1339, 1409]}]}
Loading … Spinner
There are currently no alerts