Structural Characterization of a Recombinant Fusion Protein by Instrumental Analysis and Molecular Modeling
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{"title"=>"Structural Characterization of a Recombinant Fusion Protein by Instrumental Analysis and Molecular Modeling", "type"=>"journal", "authors"=>[{"first_name"=>"Zhigang", "last_name"=>"Wu", "scopus_author_id"=>"55614049400"}, {"first_name"=>"Peng", "last_name"=>"Zhou", "scopus_author_id"=>"56688039200"}, {"first_name"=>"Xiaoxin", "last_name"=>"Li", "scopus_author_id"=>"48861461300"}, {"first_name"=>"Hui", "last_name"=>"Wang", "scopus_author_id"=>"55943801000"}, {"first_name"=>"Delun", "last_name"=>"Luo", "scopus_author_id"=>"40561419300"}, {"first_name"=>"Huaiyao", "last_name"=>"Qiao", "scopus_author_id"=>"55614242600"}, {"first_name"=>"Xiao", "last_name"=>"Ke", "scopus_author_id"=>"55368433600"}, {"first_name"=>"Jian", "last_name"=>"Huang", "scopus_author_id"=>"55508785000"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"pui"=>"368465167", "sgr"=>"84874619298", "issn"=>"19326203", "pmid"=>"23469213", "scopus"=>"2-s2.0-84874619298", "doi"=>"10.1371/journal.pone.0057642"}, "id"=>"3e4b53f4-492d-309e-9e4b-a422d5d5170b", "abstract"=>"Conbercept is a genetically engineered homodimeric protein for the treatment of wet age-related macular degeneration (wet AMD) that functions by blocking VEGF-family proteins. Its huge, highly variable architecture makes characterization and development of a functional assay difficult. In this study, the primary structure, number of disulfide linkages and glycosylation state of conbercept were characterized by high-performance liquid chromatography, mass spectrometry, and capillary electrophoresis. Molecular modeling was then applied to obtain the spatial structural model of the conbercept-VEGF-A complex, and to study its inter-atomic interactions and dynamic behavior. This work was incorporated into a platform useful for studying the structure of conbercept and its ligand binding functions.", "link"=>"http://www.mendeley.com/research/structural-characterization-recombinant-fusion-protein-instrumental-analysis-molecular-modeling", "reader_count"=>17, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Librarian"=>1, "Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>2, "Student > Postgraduate"=>1, "Student > Master"=>2, "Other"=>4, "Student > Bachelor"=>2}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Librarian"=>1, "Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>2, "Student > Postgraduate"=>1, "Student > Master"=>2, "Other"=>4, "Student > Bachelor"=>2}, "reader_count_by_subject_area"=>{"Unspecified"=>4, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>8, "Medicine and Dentistry"=>3, "Pharmacology, Toxicology and Pharmaceutical Science"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>3}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>8}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Unspecified"=>{"Unspecified"=>4}, "Pharmacology, Toxicology and Pharmaceutical Science"=>{"Pharmacology, Toxicology and Pharmaceutical Science"=>1}}, "group_count"=>0}

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Figshare

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  • {"files"=>["https://ndownloader.figshare.com/files/977010"], "description"=>"<p>This figure was prepared with the in-house program 2D-Gralab <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0057642#pone.0057642-Zhou1\" target=\"_blank\">[51]</a>.</p>", "links"=>[], "tags"=>["nonbonded", "interactions", "interface", "vegf-a", "chains", "separately", "conbercept"], "article_id"=>644341, "categories"=>["Biochemistry", "Biological Sciences", "Physics", "Biophysics"], "users"=>["Zhigang Wu", "Peng Zhou", "Xiaoxin Li", "Hui Wang", "Delun Luo", "Huaiyao Qiao", "Xiao Ke", "Jian Huang"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0057642.g006", "stats"=>{"downloads"=>1, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Schematic_representation_of_diverse_nonbonded_interactions_across_the_complex_interface_of_VEGF_A_chains_W_and_V_separately_with_conbercept_chain_B_/644341", "title"=>"Schematic representation of diverse nonbonded interactions across the complex interface of VEGF-A chains W and V separately with conbercept chain B.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-03-05 10:39:56"}
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  • {"files"=>["https://ndownloader.figshare.com/files/1011404"], "description"=>"<p>All seven N-glycosylated tryptic peptides identified with treatment of PNGase F.</p>", "links"=>[], "tags"=>["n-glycosylated", "tryptic", "peptides", "pngase"], "article_id"=>671809, "categories"=>["Biochemistry", "Biological Sciences", "Physics", "Biophysics"], "users"=>["Zhigang Wu", "Peng Zhou", "Xiaoxin Li", "Hui Wang", "Delun Luo", "Huaiyao Qiao", "Xiao Ke", "Jian Huang"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0057642.t001", "stats"=>{"downloads"=>5, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_All_seven_N_glycosylated_tryptic_peptides_identified_with_treatment_of_PNGase_F_/671809", "title"=>"All seven N-glycosylated tryptic peptides identified with treatment of PNGase F.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-03-04 00:30:09"}
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PMC Usage Stats | Further Information

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  • {"unique-ip"=>"15", "full-text"=>"15", "pdf"=>"8", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"22", "full-text"=>"25", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"27", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}
  • {"unique-ip"=>"23", "full-text"=>"22", "pdf"=>"10", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"8"}
  • {"unique-ip"=>"16", "full-text"=>"15", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"9"}
  • {"unique-ip"=>"17", "full-text"=>"18", "pdf"=>"6", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"10"}
  • {"unique-ip"=>"22", "full-text"=>"26", "pdf"=>"15", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"12"}

Relative Metric

{"start_date"=>"2013-01-01T00:00:00Z", "end_date"=>"2013-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences", "average_usage"=>[269, 466, 588, 697, 800, 896, 988, 1076, 1165, 1254, 1340, 1417]}, {"subject_area"=>"/Biology and life sciences/Biochemistry", "average_usage"=>[266, 468, 593, 703, 804, 903, 993, 1084, 1171, 1256, 1339, 1422, 1492]}, {"subject_area"=>"/Medicine and health sciences", "average_usage"=>[264, 460, 584, 692, 794, 887, 978, 1067, 1154, 1241, 1328, 1408, 1474]}, {"subject_area"=>"/Medicine and health sciences/Ophthalmology", "average_usage"=>[217, 391, 496, 595, 697, 781, 875, 952, 1050, 1136, 1210, 1272, 1332]}, {"subject_area"=>"/Physical sciences", "average_usage"=>[254, 431, 547, 651, 748, 842, 932, 1017, 1098, 1178, 1259, 1336, 1404]}]}
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