In-situ Effects of Eutrophication and Overfishing on Physiology and Bacterial Diversity of the Red Sea Coral Acropora hemprichii
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{"title"=>"In-situ Effects of Eutrophication and Overfishing on Physiology and Bacterial Diversity of the Red Sea Coral Acropora hemprichii", "type"=>"journal", "authors"=>[{"first_name"=>"Christian", "last_name"=>"Jessen", "scopus_author_id"=>"57198342409"}, {"first_name"=>"Javier Felipe", "last_name"=>"Villa Lizcano", "scopus_author_id"=>"55656601200"}, {"first_name"=>"Till", "last_name"=>"Bayer", "scopus_author_id"=>"37560917900"}, {"first_name"=>"Cornelia", "last_name"=>"Roder", "scopus_author_id"=>"34880900400"}, {"first_name"=>"Manuel", "last_name"=>"Aranda", "scopus_author_id"=>"7005278191"}, {"first_name"=>"Christian", "last_name"=>"Wild", "scopus_author_id"=>"35320721300"}, {"first_name"=>"Christian R.", "last_name"=>"Voolstra", "scopus_author_id"=>"25224158700"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-84876437124", "pui"=>"368766884", "doi"=>"10.1371/journal.pone.0062091", "isbn"=>"1932-6203", "sgr"=>"84876437124", "pmid"=>"23630625"}, "id"=>"ad76353f-0d1a-3e07-ab0f-843df937c94d", "abstract"=>"<p>Coral reefs of the Central Red Sea display a high degree of endemism, and are increasingly threatened by anthropogenic effects due to intense local coastal development measures. Overfishing and eutrophication are among the most significant local pressures on these reefs, but there is no information available about their potential effects on the associated microbial community. Therefore, we compared holobiont physiology and 16S-based bacterial communities of tissue and mucus of the hard coral <italic>Acropora hemprichii</italic> after 1 and 16 weeks of <italic>in-situ</italic> inorganic nutrient enrichment (via fertilizer diffusion) and/or herbivore exclusion (via caging) in an offshore reef of the Central Red Sea. Simulated eutrophication and/or overfishing treatments did not affect coral physiology with respect to coral respiration rates, chlorophyll <italic>a</italic> content, zooxanthellae abundance, or δ <sup>15</sup>N isotopic signatures. The bacterial community of <italic>A. hemprichii</italic> was rich and uneven, and diversity increased over time in all treatments. While distinct bacterial species were identified as a consequence of eutrophication, overfishing, or both, two bacterial species that could be classified to the genus <italic>Endozoicomonas</italic> were consistently abundant and constituted two thirds of bacteria in the coral. Several nitrogen-fixing and denitrifying bacteria were found in the coral specimens that were exposed to experimentally increased nutrients. However, no particular bacterial species was consistently associated with the coral under a given treatment and the single effects of manipulated eutrophication and overfishing could not predict the combined effect. Our data underlines the importance of conducting field studies in a holobiont framework, taking both, physiological and molecular measures into account.</p>", "link"=>"http://www.mendeley.com/research/insitu-effects-eutrophication-overfishing-physiology-bacterial-diversity-red-sea-coral-acropora-hemp", "reader_count"=>67, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>18, "Student > Doctoral Student"=>4, "Student > Ph. D. Student"=>22, "Student > Postgraduate"=>3, "Student > Master"=>8, "Other"=>3, "Student > Bachelor"=>6, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>18, "Student > Doctoral Student"=>4, "Student > Ph. D. Student"=>22, "Student > Postgraduate"=>3, "Student > Master"=>8, "Other"=>3, "Student > Bachelor"=>6, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>1, "Environmental Science"=>14, "Biochemistry, Genetics and Molecular Biology"=>7, "Agricultural and Biological Sciences"=>44, "Economics, Econometrics and Finance"=>1}, "reader_count_by_subdiscipline"=>{"Economics, Econometrics and Finance"=>{"Economics, Econometrics and Finance"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>44}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>7}, "Unspecified"=>{"Unspecified"=>1}, "Environmental Science"=>{"Environmental Science"=>14}}, "reader_count_by_country"=>{"New Zealand"=>1, "Saudi Arabia"=>2, "Mexico"=>1, "Malaysia"=>1}, "group_count"=>2}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1030707"], "description"=>"<p>All identified OTUs were identified with a significance level of <i>P</i><0.01. Bold numbers designate the time points and treatments of significant association.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "otus", "non-subsampled", "counts"], "article_id"=>687317, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.t003", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bacterial_OTUs_and_non_subsampled_read_counts_significantly_associated_with_experimental_groupings_/687317", "title"=>"Bacterial OTUs and non-subsampled read counts significantly associated with experimental groupings.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-04-22 02:01:57"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030706"], "description"=>"<p>Sample Week 16, colony A, CF died and was left out of the analysis.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "454", "16s", "rrna", "sequencing"], "article_id"=>687316, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.t002", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Summary_statistics_of_454_16S_rRNA_gene_sequencing_CA_8202_8202_cage_FE_8202_8202_fertilizer_CF_8202_8202_cage_amp_fertilizer_/687316", "title"=>"Summary statistics of 454 16S rRNA gene sequencing (CA = cage, FE = fertilizer, CF = cage & fertilizer).", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-04-22 02:01:56"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030703"], "description"=>"<p>Shown are concentrations for ambient and enriched treatments of week 1 and week 16 directly above analyzed frames. Panel A depicts concentrations of dissolved inorganic nitrogen (DIN) and panel B the concentrations of soluble reactive phosphate (SRP). Asterisks indicate significance (<i>P<0.05</i>) of single t-tests.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology"], "article_id"=>687313, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.g001", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Inorganic_nutrient_concentrations_/687313", "title"=>"Inorganic nutrient concentrations.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-04-22 02:01:53"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030714", "https://ndownloader.figshare.com/files/1030715", "https://ndownloader.figshare.com/files/1030716", "https://ndownloader.figshare.com/files/1030717", "https://ndownloader.figshare.com/files/1030718"], "description"=>"<div><p>Coral reefs of the Central Red Sea display a high degree of endemism, and are increasingly threatened by anthropogenic effects due to intense local coastal development measures. Overfishing and eutrophication are among the most significant local pressures on these reefs, but there is no information available about their potential effects on the associated microbial community. Therefore, we compared holobiont physiology and 16S-based bacterial communities of tissue and mucus of the hard coral <i>Acropora hemprichii</i> after 1 and 16 weeks of <i>in-situ</i> inorganic nutrient enrichment (via fertilizer diffusion) and/or herbivore exclusion (via caging) in an offshore reef of the Central Red Sea. Simulated eutrophication and/or overfishing treatments did not affect coral physiology with respect to coral respiration rates, chlorophyll <i>a</i> content, zooxanthellae abundance, or δ <sup>15</sup>N isotopic signatures. The bacterial community of <i>A. hemprichii</i> was rich and uneven, and diversity increased over time in all treatments. While distinct bacterial species were identified as a consequence of eutrophication, overfishing, or both, two bacterial species that could be classified to the genus <i>Endozoicomonas</i> were consistently abundant and constituted two thirds of bacteria in the coral. Several nitrogen-fixing and denitrifying bacteria were found in the coral specimens that were exposed to experimentally increased nutrients. However, no particular bacterial species was consistently associated with the coral under a given treatment and the single effects of manipulated eutrophication and overfishing could not predict the combined effect. Our data underlines the importance of conducting field studies in a holobiont framework, taking both, physiological and molecular measures into account.</p></div>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "eutrophication", "overfishing", "physiology", "bacterial", "coral"], "article_id"=>687319, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0062091.s001", "https://dx.doi.org/10.1371/journal.pone.0062091.s002", "https://dx.doi.org/10.1371/journal.pone.0062091.s003", "https://dx.doi.org/10.1371/journal.pone.0062091.s004", "https://dx.doi.org/10.1371/journal.pone.0062091.s005"], "stats"=>{"downloads"=>10, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_In_situ_Effects_of_Eutrophication_and_Overfishing_on_Physiology_and_Bacterial_Diversity_of_the_Red_Sea_Coral_Acropora_hemprichii_/687319", "title"=>"<i>In-situ</i> Effects of Eutrophication and Overfishing on Physiology and Bacterial Diversity of the Red Sea Coral <i>Acropora hemprichii</i>", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2013-04-22 02:01:59"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030708"], "description"=>"<p>Response variables are shown in the first row and the independent factors in the first column.</p><p>Abbreviations: Tr = Treatment, Ti = Time, C = Coral Colony. Significant results (<i>P</i><0.05) are indicated by asterisks.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "2-factorial", "anova", "physiological", "coral"], "article_id"=>687318, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.t001", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Results_from_2_factorial_ANOVA_of_physiological_coral_parameters_/687318", "title"=>"Results from 2-factorial ANOVA of physiological coral parameters.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-04-22 02:01:58"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030705"], "description"=>"<p>White symbols represent samples from week 1. Black symbols are samples from week 16. Coral colonies are depicted by the letter preceding the symbol (A, B, C). Circles denote cage, triangles denote fertilizer, and squares denote cage & fertilizer treatments. Percentages given represent the amount of variance explained by the corresponding axis.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "unweighted", "unifrac", "distances", "coral"], "article_id"=>687315, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.g003", "stats"=>{"downloads"=>2, "page_views"=>44, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Principal_Coordinate_Analysis_PCoA_of_unweighted_UniFrac_distances_between_coral_samples_/687315", "title"=>"Principal Coordinate Analysis (PCoA) of unweighted UniFrac distances between coral samples.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-04-22 02:01:55"}
  • {"files"=>["https://ndownloader.figshare.com/files/1030704"], "description"=>"<p>Each color represents each of the 15 most abundant families in all samples. All other taxa are grouped under category others. Bars are plotted according to 1) time (W1 =  week 1, W16 =  week 16), 2) coral mother colony (A, B, C) or water (W), and 3) treatment (CA = cage, FE = fertilizer, CF = cage & fertilizer). Sample W16.A.CF died and was left out of the analysis.</p>", "links"=>[], "tags"=>["ecology", "Ecological environments", "Marine environments", "Marine ecology", "Coral reefs", "microbial ecology", "Marine biology", "Coastal ecology", "corals", "microbiology", "taxonomy", "phylogenetic"], "article_id"=>687314, "categories"=>["Biological Sciences"], "users"=>["Christian Jessen", "Javier Felipe Villa Lizcano", "Till Bayer", "Cornelia Roder", "Manuel Aranda", "Christian Wild", "Christian R Voolstra"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0062091.g002", "stats"=>{"downloads"=>1, "page_views"=>16, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bacterial_taxonomy_stack_plot_on_the_phylogenetic_level_of_family_/687314", "title"=>"Bacterial taxonomy stack plot on the phylogenetic level of family.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-04-22 02:01:54"}

PMC Usage Stats | Further Information

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Relative Metric

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