A Cotton Annexin Protein AnxGb6 Regulates Fiber Elongation through Its Interaction with Actin 1
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{"title"=>"A Cotton Annexin Protein AnxGb6 Regulates Fiber Elongation through Its Interaction with Actin 1", "type"=>"journal", "authors"=>[{"first_name"=>"Yiqun", "last_name"=>"Huang", "scopus_author_id"=>"55757342000"}, {"first_name"=>"Jin", "last_name"=>"Wang", "scopus_author_id"=>"56802119300"}, {"first_name"=>"Lida", "last_name"=>"Zhang", "scopus_author_id"=>"8604950000"}, {"first_name"=>"Kaijing", "last_name"=>"Zuo", "scopus_author_id"=>"7003447188"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "pmid"=>"23750279", "scopus"=>"2-s2.0-84878659402", "doi"=>"10.1371/journal.pone.0066160", "sgr"=>"84878659402", "pui"=>"369060445"}, "id"=>"20ed2256-5709-3d63-8a60-9af857fca144", "abstract"=>"Annexins are assumed to be involved in regulating cotton fiber elongation, but direct evidence remains to be presented. Here we cloned six Annexin genes (AnxGb) abundantly expressed in fiber from sea-island cotton (G. barbadense). qRT-PCR results indicated that all six G. barbadense annexin genes were expressed in elongating cotton fibers, while only the expression of AnxGb6 was cotton fiber-specific. Yeast two hybridization and BiFC analysis revealed that AnxGb6 homodimer interacted with a cotton fiber specific actin GbAct1. Ectopic-expressed AnxGb6 in Arabidopsis enhanced its root elongation without increasing the root cell number. Ectopic AnxGb6 expression resulted in more F-actin accumulation in the basal part of the root cell elongation zone. Analysis of AnxGb6 expression in three cotton genotypes with different fiber length confirmed that AnxGb6 expression was correlated to cotton fiber length, especially fiber elongation rate. Our results demonstrated that AnxGb6 was important for fiber elongation by potentially providing a domain for F-actin organization.", "link"=>"http://www.mendeley.com/research/cotton-annexin-protein-anxgb6-regulates-fiber-elongation-through-interaction-actin-1", "reader_count"=>18, "reader_count_by_academic_status"=>{"Researcher"=>5, "Student > Ph. D. Student"=>8, "Student > Master"=>2, "Other"=>1, "Student > Bachelor"=>1, "Professor"=>1}, "reader_count_by_user_role"=>{"Researcher"=>5, "Student > Ph. D. Student"=>8, "Student > Master"=>2, "Other"=>1, "Student > Bachelor"=>1, "Professor"=>1}, "reader_count_by_subject_area"=>{"Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>14, "Social Sciences"=>1, "Unspecified"=>1}, "reader_count_by_subdiscipline"=>{"Social Sciences"=>{"Social Sciences"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>14}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Unspecified"=>{"Unspecified"=>1}}, "reader_count_by_country"=>{"Poland"=>1}, "group_count"=>1}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1073976"], "description"=>"<p>Expression analysis of annexin genes in <i>G. barbadense</i> (Pima-90) vegetative tissues (R: roots; S: stems; L: leaves), reproductive tissues (C: carpels; −3: ovules in –3 DPA; 0: ovules in 0 DPA; 3: ovules in +3 DPA) and its allele gene expression in <i>G. hirsutum</i> fuzzless-lintless mutant (XU142 fl) reproductive tissues (M −3; ovules in –3 DPA; M0: ovules in 0 DPA; M3: ovules in +3 DPA). The comparative C<sub>T</sub> method was adopted and the expression was normalized to the levels of Pima-90 and XU142 fl. Error bars represent standard errors.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "quantitative", "pcr", "annexin", "genes", "pima-90", "xu142"], "article_id"=>711296, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g003", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Real_time_quantitative_PCR_analysis_of_the_annexin_genes_in_Pima_90_and_XU142_fl_/711296", "title"=>"Real-time quantitative PCR analysis of the annexin genes in Pima-90 and XU142 fl.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:36"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073977"], "description"=>"<p>A: AnxGb1-GFP, B: AnxGb4-GFP, C: AnxGb6-GFP and D: Control plants, expressing 35S::GFP. Right is the corresponding bright-field. Left is the corresponding black-field. Scale bar: 25 µm.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "annexin", "sub-cellular", "localization"], "article_id"=>711297, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g004", "stats"=>{"downloads"=>0, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Cotton_annexin_protein_sub_cellular_localization_analysis_/711297", "title"=>"Cotton annexin protein sub-cellular localization analysis.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:37"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073978"], "description"=>"<p>A: <i>Arabidopsis</i> seedlings grown in ½ MS media for 14 days. (WT: Wild type; L7: transgenic <i>AnxGb6</i> line L7). B: Confocal images of primary roots cells stained with propidium iodide. (WT: Wild type; L7: 35S::<i>AnxGb6</i> transgenic line L7; Scale bar: 50 µm). C: Morphometric analysis of the transgenic <i>Arabidopsis</i> plants root growth for 14 days (WT: Wild type; L1–L9: 35S::<i>AnxGb6</i> transgenic lines; Error bars represent standard errors). D: Morphometric analysis of the transgenic <i>Arabidopsis</i> plant root cell length (WT: Wild type; L7: 35S::<i>AnxGb6</i> transgenic line L7; Error bars represent standard errors). E–F: Confocal images of F-actin accumulation in <i>Arabidopsis</i> primary roots cells. E: Wild type <i>Arabidopsis</i> roots cells, Scale bar: 12.5 µm. F: Transgenic <i>Arabidopsis</i> roots cells, Scale bar: 12.5 µm.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "transgenic"], "article_id"=>711298, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g005", "stats"=>{"downloads"=>0, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phenotypes_of_transgenic_AnxGb6_Arabidopsis_plants_/711298", "title"=>"Phenotypes of transgenic <i>AnxGb6 Arabidopsis</i> plants.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:38"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073979"], "description"=>"<p>A: AnxGb6 binds to GbAct1. Yeast harboring BD-AnxGb6/AD-GbAct1 or BD-GbAct1/AD-AnxGb6 grown on selective plates as indicated. Control medium: (SD/-T-L-H-A) selective medium. The control is yeast transformed with BD-AnxGb6/ADT7 and BD-GbAct1/ADT7. Dilution multiple from left to right is 1 fold, 10 fold, 100 fold. B–C: BiFC of epidermal cells co-expressing split YFP fusions of AnxGb6 and GbAct1 or empty vector controls. Combinations of N- and C-terminal YFP fragments (<i>Yn</i> and <i>Yc</i>, respectively) were infiltrated as vector controls or fused to the N terminus of AnxGb6 and GbAct1 as follows: B: AnxGb6-<i>Yc</i> and GbAct1-<i>Yn</i>, Scale bar: 50 µm; C: vector-<i>Yc</i> and vector-<i>Yn</i>, Scale bar: 100 µm. The interaction and co-localization were observed at the plasma membrane. Right is the corresponding bright-field.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "interacts"], "article_id"=>711299, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g006", "stats"=>{"downloads"=>9, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_AnxGb6_interacts_with_GbAct1_/711299", "title"=>"AnxGb6 interacts with GbAct1.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073980"], "description"=>"<p>A: AnxGb6 binds AnxGb5 or itself. Yeast harbouring BD-AnxGb6/AD-AnxGb5, BD-AnxGb5/AD-AnxGb6, BD-AnxGb6/AD-AnxGb6 and BD-AnxGb5/AD-AnxGb5 grown on selective plates as indicated. Control medium: (SD/-T-L-H-A) selective medium. The control yeast transformed with BD-AnxGb6/ADT7 and BD-AnxGb5/ADT7. Dilution multiple from left to right is 1 fold, 10 fold, 100 fold. B-E: BiFC of epidermal cells co-expressing split YFP fusions of AnxGb6 and AnxGb5 or empty vector controls. Combinations of N- and C-terminal YFP fragments (<i>Yn</i> and <i>Yc</i>, respectively) were infiltrated as vector controls or fused to the N terminus of AnxGb6 and AnxGb5 as follows: B: AnxGb6-<i>Yc</i> and AnxGb5-<i>Yn</i>, Scale bar: 50 µm; C: AnxGb6-<i>Yc</i> and AnxGb6-<i>Yn</i>, Scale bar: 25 µm; D: AnxGb5-<i>Yc</i> and AnxGb5-<i>Yn</i>, Scale bar: 25 µm; E: vector-<i>Yc</i> and vector-<i>Yn</i>, Scale bar: 50 µm. The interaction and co-localization was observed in the plasma membrane. Right is the corresponding bright-field.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology"], "article_id"=>711300, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g007", "stats"=>{"downloads"=>0, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_AnxGb5_and_6_interact_with_each_other_and_self_associate_/711300", "title"=>"AnxGb5 and 6 interact with each other and self-associate.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:40"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073981"], "description"=>"<p>A: Fiber length of Pima-90, Coker312 and T586 cotton seeds at +3, +6, +9 and +12 DPA. Ovules were sectioned and the length of 400 fiber cells was measured under a microscope for each type. Data was processed with Microsoft Excel. Error bars represent standard errors. B: Real-time quantitative PCR analysis of the <i>AnxGb6</i> gene and its alleles in Pima-90, Coker312 and T586. Expression analysis of <i>AnxGb6</i> gene and its alleles in Pima-90 (<i>G. barbadense</i> L.), Coker312 (<i>G. hirsutum</i> L.) and T586 (<i>G. hirsutum</i> L.). 3DPA: ovules in +3 DPA, 6DPA: ovules in +6 DPA, 9DPA: ovules in +9 DPA, 12DPA: ovules in +12DPA. The comparative C<sub>T</sub> method was adopted and the expression was normalized to the levels of Pima-90, Coker312 and T586. Error bars represent standard errors.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "coker312", "t586"], "article_id"=>711301, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g008", "stats"=>{"downloads"=>0, "page_views"=>18, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Fiber_length_and_AnxGb6_gene_expression_pattern_in_Pima_90_Coker312_and_T586_cotton_seeds_/711301", "title"=>"Fiber length and <i>AnxGb6</i> gene expression pattern in Pima-90, Coker312 and T586 cotton seeds.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:41"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073984"], "description"=>"<p>A-C: Fiber cells at +3 DPA. A: Pima-90, B: Coker312, and C: T586. Note the length of fiber is different in the three varieties at the same stages. D: Fiber cells at +6 DPA and E: Fiber cells at +9 DPA. Bars: 10 µm in D and E.</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "f-actin", "cells", "coker312", "t586"], "article_id"=>711304, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g009", "stats"=>{"downloads"=>1, "page_views"=>24, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Comparison_of_F_actin_organization_in_fiber_cells_between_Pima_90_Coker312_and_T586_Plants_/711304", "title"=>"Comparison of F-actin organization in fiber cells between Pima-90, Coker312 and T586 Plants.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073986", "https://ndownloader.figshare.com/files/1073988", "https://ndownloader.figshare.com/files/1073989", "https://ndownloader.figshare.com/files/1073992"], "description"=>"<div><p>Annexins are assumed to be involved in regulating cotton fiber elongation, but direct evidence remains to be presented. Here we cloned six Annexin genes (<i>AnxGb</i>) abundantly expressed in fiber from sea-island cotton (<i>G. barbadense</i>). qRT-PCR results indicated that all six <i>G. barbadense</i> annexin genes were expressed in elongating cotton fibers, while only the expression of <i>AnxGb6</i> was cotton fiber-specific. Yeast two hybridization and BiFC analysis revealed that AnxGb6 homodimer interacted with a cotton fiber specific actin GbAct1. Ectopic-expressed <i>AnxGb6</i> in <i>Arabidopsis</i> enhanced its root elongation without increasing the root cell number. Ectopic <i>AnxGb6</i> expression resulted in more F-actin accumulation in the basal part of the root cell elongation zone. Analysis of <i>AnxGb6</i> expression in three cotton genotypes with different fiber length confirmed that <i>AnxGb6</i> expression was correlated to cotton fiber length, especially fiber elongation rate. Our results demonstrated that AnxGb6 was important for fiber elongation by potentially providing a domain for F-actin organization.</p></div>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "annexin", "anxgb6", "regulates", "elongation", "actin"], "article_id"=>711305, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0066160.s001", "https://dx.doi.org/10.1371/journal.pone.0066160.s002", "https://dx.doi.org/10.1371/journal.pone.0066160.s003", "https://dx.doi.org/10.1371/journal.pone.0066160.s004"], "stats"=>{"downloads"=>12, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_A_Cotton_Annexin_Protein_AnxGb6_Regulates_Fiber_Elongation_through_Its_Interaction_with_Actin_1_/711305", "title"=>"A Cotton Annexin Protein AnxGb6 Regulates Fiber Elongation through Its Interaction with Actin 1", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2013-06-04 00:21:45"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073973"], "description"=>"<p>Potential functional domains are indicated as follows: rectangle, Calcium binding site of type II G-X-GTD-{ca. 38}-E/D; black box, conserved tryptophan required for Ca<sup>2+</sup>-independent membrane binding; triangle, putative S3 cluster thought to be involved in redox reactions; grey, IRI motif for binding actin; circle, conserved His residue. Amino acid sequence alignment was performed using CLUSTALW. Accession numbers are as follows: AnxAt1 (NP174810); AnxAt 2 (NP201307); AnxZm33 (NP001105728); AnxZm35 (NP001105475); AnxGh1 (AAR13288).</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology", "alignment", "anxgb1-6", "annexin"], "article_id"=>711294, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g001", "stats"=>{"downloads"=>8, "page_views"=>30, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Multiple_sequence_alignment_analysis_of_AnxGb1_6_and_other_plant_annexin_proteins_/711294", "title"=>"Multiple sequence alignment analysis of AnxGb1-6 and other plant annexin proteins.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:34"}
  • {"files"=>["https://ndownloader.figshare.com/files/1073975"], "description"=>"<p>Nineteen of the complete amino acid sequences of annexin proteins were used to generate the Neighbor–Joining tree, and the numbers next to each node give bootstrap values from 1000 replicates.(AnxGh1: AAR13288.1; AnxGh2: AAB67994.1; AnxGhF: AAC33305.1; AnxGhFx: FJ415173; AnxAt1: NP_174810.1; AnxAt2: NP_201307.1; AnxAt3: NP_181410.1; AnxAt4: NP_181409.1; AnxAt5: NP_564920.1; AnxAt6: NP_196584.1; AnxAt7: NP_196585.1; AnxAt8: NP_568271.2; AnxZm2: NP_001105475.1; AnxZm4: NP_001147343.1; AnxZmF: ACF82214.1; AnxZm33: NP_001105728.1; AnxOs1: NP_001061839.1; AnxOs2: NP_001048149.1; AnxOs33: NP_001057176.1)</p>", "links"=>[], "tags"=>["crops", "fibers", "cotton", "Biochemistry", "Plant biochemistry", "Computational biology", "Molecular genetics", "Gene identification and analysis", "gene expression", "developmental biology", "Organism development", "Pattern formation", "genetics", "Gene function", "Gene networks", "Molecular cell biology"], "article_id"=>711295, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Yiqun Huang", "Jin Wang", "Lida Zhang", "Kaijing Zuo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0066160.g002", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_analysis_of_G_barbadense_annexins_/711295", "title"=>"Phylogenetic analysis of <i>G. barbadense</i> annexins.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-06-04 00:21:35"}

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Relative Metric

{"start_date"=>"2013-01-01T00:00:00Z", "end_date"=>"2013-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Agriculture", "average_usage"=>[241, 422, 551, 659, 765, 866, 954, 1043, 1142, 1235, 1311, 1397, 1462]}, {"subject_area"=>"/Biology and life sciences/Biochemistry", "average_usage"=>[266, 468, 593, 703, 804, 903, 993, 1084, 1171, 1256, 1339, 1422, 1492]}, {"subject_area"=>"/Biology and life sciences/Plant science", "average_usage"=>[269, 451, 577, 699, 812, 922, 1019, 1126, 1225, 1309, 1404, 1493, 1563]}]}
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