Genetic Variants in Hormone-Related Genes and Risk of Breast Cancer
Publication Date
July 23, 2013
Journal
PLOS ONE
Authors
Tess Clendenen, Anne Zeleniuch Jacquotte, Isaac Wirgin, Karen L. Koenig, et al
Volume
8
Issue
7
Pages
e69367
DOI
https://dx.plos.org/10.1371/journal.pone.0069367
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0069367
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/23935996
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3720532
Europe PMC
http://europepmc.org/abstract/MED/23935996
Web of Science
000325211000109
Scopus
84880713567
Mendeley
http://www.mendeley.com/research/genetic-variants-hormonerelated-genes-risk-breast-cancer-1
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Mendeley | Further Information

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Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1127014"], "description"=>"a<p>For parous women only.</p>b<p>HRT use during follow-up (for NYUWHS) or use history assessed at enrollment (NSMSC).</p>c<p>p-values were estimated using logistic regression conditional on matching sets.</p>", "links"=>[], "tags"=>["Evolutionary biology", "population genetics", "Genetic polymorphism", "genetics", "Genetics of disease", "Diagnostic medicine", "pathology", "Clinical pathology", "Molecular genetics", "epidemiology", "Cancer epidemiology", "Genetic epidemiology", "Obstetrics and gynecology", "breast cancer", "oncology", "Cancers and neoplasms", "Breast tumors", "variables", "cancer"], "article_id"=>751981, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Tess Clendenen", "Anne Zeleniuch-Jacquotte", "Isaac Wirgin", "Karen L. Koenig", "Yelena Afanasyeva", "Eva Lundin", "Alan A. Arslan", "Tomas Axelsson", "Asta Försti", "Göran Hallmans", "Kari Hemminki", "Per Lenner", "Nirmal Roy", "Roy E. Shore", "Yu Chen"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0069367.t001", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Distributions_of_demographic_and_lifestyle_variables_by_breast_cancer_status_/751981", "title"=>"Distributions of demographic and lifestyle variables by breast cancer status.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-07-23 02:33:19"}
  • {"files"=>["https://ndownloader.figshare.com/files/1127015"], "description"=>"a<p>Models were adjusted for ethnicity (Caucasian, African American, Hispanic) and through matching, were also adjusted for age at blood donation, duration of sample storage, and menopausal status.</p>b<p>Models were adjusted for ethnicity (Caucasian, African American, Hispanic), age at first birth/parity (≤20 years, 21–25 years, 26–30 years, >30 years, nulliparous), age at menarche, family history of breast cancer, ever use of HRT, and BMI, and through matching, were also adjusted for age at blood donation, duration of sample storage, and menopausal status.</p>c<p>For each genetic variant (except <i>PGR-12</i> rs1042838), the genotype associated with higher estrogen exposure (see below) was assigned a value of 1 and other genotypes (homozygous and heterozygous for the lower estrogen exposure allele) were assigned 0. A score was created by adding the values. Women with four or five high estrogen variables were grouped because there were too few women with five high estrogen variables to assess separately (3 cases/4 controls).</p><p><b>Notes: For each genotype, variants are listed in order of expected increasing estrogen (or progesterone for </b><b><i>PGR-12</i></b><b>) exposure:</b></p><p><i>SHBG</i> (rs6259) A allele is associated with higher SHBG levels. SHBG binds to estrogens and reduces their bioavailability. G allele = higher estrogen exposure.</p><p><i>PGR-12</i> (rs1042838) T allele has been shown to reduce the <i>PGR</i> transcript stability and the response to progesterone. G allele = higher progesterone exposure.</p><p><i>ESR1</i> (rs2234693) C allele may be associated with increased ERα transcription. C allele = possible higher exposure to estrogen signaling.</p><p><i>CYP19</i> 3′UTR (rs10046) T allele is associated with increased transcriptional activity of aromatase (converts androgens to estrogens). T allele = higher estrogen exposure.</p><p><i>CYP19</i> 5′Flank (rs4775936) A allele is associated with increased transcriptional activity of aromatase (converts androgens to estrogens). A allele = higher estrogen exposure.</p><p><i>UGT1A1</i> (rs8175347) 7 repeat allele is associated with reduced glucuronidation (and clearance) of estrogens. 7 repeat allele = higher estrogen exposure.</p>", "links"=>[], "tags"=>["Evolutionary biology", "population genetics", "Genetic polymorphism", "genetics", "Genetics of disease", "Diagnostic medicine", "pathology", "Clinical pathology", "Molecular genetics", "epidemiology", "Cancer epidemiology", "Genetic epidemiology", "Obstetrics and gynecology", "breast cancer", "oncology", "Cancers and neoplasms", "Breast tumors", "variants", "hormone-related", "genes", "cancer", "pre-", "post-menopausal"], "article_id"=>751982, "categories"=>["Medicine", "Biological Sciences"], "users"=>["Tess Clendenen", "Anne Zeleniuch-Jacquotte", "Isaac Wirgin", "Karen L. Koenig", "Yelena Afanasyeva", "Eva Lundin", "Alan A. Arslan", "Tomas Axelsson", "Asta Försti", "Göran Hallmans", "Kari Hemminki", "Per Lenner", "Nirmal Roy", "Roy E. Shore", "Yu Chen"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0069367.t002", "stats"=>{"downloads"=>1, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Associations_between_genetic_variants_in_hormone_related_genes_and_breast_cancer_risk_in_pre_and_post_menopausal_women_/751982", "title"=>"Associations between genetic variants in hormone-related genes and breast cancer risk in pre- and post-menopausal women.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-07-23 02:33:19"}

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  • {"unique-ip"=>"6", "full-text"=>"7", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
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  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"11", "full-text"=>"11", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
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  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"6", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
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  • {"unique-ip"=>"4", "full-text"=>"4", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
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  • {"unique-ip"=>"9", "full-text"=>"8", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"10"}
  • {"unique-ip"=>"5", "full-text"=>"3", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"12"}
  • {"unique-ip"=>"3", "full-text"=>"2", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"2"}
  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"3"}
  • {"unique-ip"=>"9", "full-text"=>"7", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2020", "month"=>"4"}
  • {"unique-ip"=>"3", "full-text"=>"2", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"5"}
  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"6"}
  • {"unique-ip"=>"10", "full-text"=>"6", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"7"}
  • {"unique-ip"=>"10", "full-text"=>"8", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"8"}
  • {"unique-ip"=>"3", "full-text"=>"2", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"9"}
  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"10"}
  • {"unique-ip"=>"6", "full-text"=>"8", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"11"}
  • {"unique-ip"=>"7", "full-text"=>"6", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2020", "month"=>"12"}

Relative Metric

{"start_date"=>"2013-01-01T00:00:00Z", "end_date"=>"2013-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Biochemistry", "average_usage"=>[266, 468, 593, 703, 804, 903, 993, 1084, 1171, 1256, 1339, 1422, 1492]}, {"subject_area"=>"/Biology and life sciences/Genetics", "average_usage"=>[284, 491, 620, 738, 843, 945, 1043, 1137, 1225, 1315, 1400, 1479, 1555]}, {"subject_area"=>"/Medicine and health sciences", "average_usage"=>[264, 460, 584, 692, 794, 887, 978, 1067, 1154, 1241, 1328, 1408, 1474]}, {"subject_area"=>"/Medicine and health sciences/Anatomy", "average_usage"=>[248, 441, 564, 668, 769, 859, 948, 1034, 1117, 1202, 1290, 1368, 1437]}, {"subject_area"=>"/Medicine and health sciences/Hematology", "average_usage"=>[238, 424, 545, 650, 749, 839, 926, 1006, 1090, 1167, 1243, 1316, 1380]}, {"subject_area"=>"/Medicine and health sciences/Oncology", "average_usage"=>[249, 468, 599, 718, 820, 920, 1008, 1093, 1181, 1281, 1357, 1444, 1517]}, {"subject_area"=>"/Medicine and health sciences/Physiology", "average_usage"=>[258, 449, 572, 679, 775, 866, 956, 1041, 1124, 1211, 1291, 1371, 1437]}]}
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