Ih Tunes Theta/Gamma Oscillations and Cross-Frequency Coupling In an In Silico CA3 Model
Publication Date
October 18, 2013
Journal
PLOS ONE
Authors
Samuel A. Neymotin, Markus M. Hilscher, Thiago C. Moulin, Yosef Skolnick, et al
Volume
8
Issue
10
Pages
e76285
DOI
https://dx.plos.org/10.1371/journal.pone.0076285
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0076285
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/24204609
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3799898
Europe PMC
http://europepmc.org/abstract/MED/24204609
Web of Science
000326029300017
Scopus
84885789705
Mendeley
http://www.mendeley.com/research/ih-tunes-thetagamma-oscillations-crossfrequency-coupling-silico-ca3-model
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Mendeley | Further Information

{"title"=>"Ih Tunes Theta/Gamma Oscillations and Cross-Frequency Coupling In an In Silico CA3 Model", "type"=>"journal", "authors"=>[{"first_name"=>"Samuel A.", "last_name"=>"Neymotin", "scopus_author_id"=>"24080754800"}, {"first_name"=>"Markus M.", "last_name"=>"Hilscher", "scopus_author_id"=>"55781191700"}, {"first_name"=>"Thiago C.", "last_name"=>"Moulin", "scopus_author_id"=>"54420724500"}, {"first_name"=>"Yosef", "last_name"=>"Skolnick", "scopus_author_id"=>"55887702300"}, {"first_name"=>"Maciej T.", "last_name"=>"Lazarewicz", "scopus_author_id"=>"6506541352"}, {"first_name"=>"William W.", "last_name"=>"Lytton", "scopus_author_id"=>"7004111060"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"isbn"=>"1932-6203 (Electronic) 1932-6203 (Linking)", "pmid"=>"24204609", "doi"=>"10.1371/journal.pone.0076285", "pui"=>"370052144", "issn"=>"19326203", "sgr"=>"84885789705", "scopus"=>"2-s2.0-84885789705"}, "id"=>"7c00fb51-0e4e-3d5b-b347-96e26066bdc3", "abstract"=>"Ih channels are uniquely positioned to act as neuromodulatory control points for tuning hippocampal theta (4-12 Hz) and gamma (25 Hz) oscillations, oscillations which are thought to have importance for organization of information flow. contributes to neuronal membrane resonance and resting membrane potential, and is modulated by second messengers. We investigated oscillatory control using a multiscale computer model of hippocampal CA3, where each cell class (pyramidal, basket, and oriens-lacunosum moleculare cells), contained type-appropriate isoforms of . Our model demonstrated that modulation of pyramidal and basket allows tuning theta and gamma oscillation frequency and amplitude. Pyramidal also controlled cross-frequency coupling (CFC) and allowed shifting gamma generation towards particular phases of the theta cycle, effected via 's ability to set pyramidal excitability. Our model predicts that in vivo neuromodulatory control of allows flexibly controlling CFC and the timing of gamma discharges at particular theta phases.", "link"=>"http://www.mendeley.com/research/ih-tunes-thetagamma-oscillations-crossfrequency-coupling-silico-ca3-model", "reader_count"=>52, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>3, "Researcher"=>10, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>19, "Student > Master"=>8, "Other"=>1, "Student > Bachelor"=>2, "Lecturer > Senior Lecturer"=>1, "Professor"=>3}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>3, "Researcher"=>10, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>19, "Student > Master"=>8, "Other"=>1, "Student > Bachelor"=>2, "Lecturer > Senior Lecturer"=>1, "Professor"=>3}, "reader_count_by_subject_area"=>{"Unspecified"=>6, "Engineering"=>5, "Mathematics"=>1, "Agricultural and Biological Sciences"=>13, "Medicine and Dentistry"=>3, "Neuroscience"=>14, "Sports and Recreations"=>1, "Physics and Astronomy"=>3, "Psychology"=>3, "Computer Science"=>3}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>5}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>3}, "Neuroscience"=>{"Neuroscience"=>14}, "Sports and Recreations"=>{"Sports and Recreations"=>1}, "Physics and Astronomy"=>{"Physics and Astronomy"=>3}, "Psychology"=>{"Psychology"=>3}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>13}, "Computer Science"=>{"Computer Science"=>3}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>6}}, "reader_count_by_country"=>{"Belgium"=>1, "United States"=>2, "Japan"=>2, "United Kingdom"=>1, "France"=>2, "Germany"=>1}, "group_count"=>3}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1251693"], "description"=>"<p>Synaptic parameters.</p>", "links"=>[], "tags"=>[], "article_id"=>827661, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.t001", "stats"=>{"downloads"=>4, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Synaptic_parameters_/827661", "title"=>"Synaptic parameters.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251691"], "description"=>"<p>Parameters for modeling background activity.</p>", "links"=>[], "tags"=>["modeling"], "article_id"=>827660, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.t002", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Parameters_for_modeling_background_activity_/827660", "title"=>"Parameters for modeling background activity.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251672"], "description"=>"<p>(<b>a</b>) Local field potentials (LFPs). Blue LFP is from baseline simulation. Up (down) arrows indicate directions of increase (decrease) of . (<b>b</b>) Scatter plots of theta and gamma peak frequencies and power (normalized).</p>", "links"=>[], "tags"=>["180", "scaling"], "article_id"=>827642, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g006", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_180_simulations_with_scaling_in_basket_BAS_interneurons_/827642", "title"=>"Activity (from 180 simulations) with scaling in basket (BAS) interneurons.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251687"], "description"=>"<p>Top shows spike rasters (PYR:red; BAS:green; OLM:blue). Bottom displays average somatic voltage from PYR (red; ) and BAS (green; ) cells.</p>", "links"=>[], "tags"=>["modulating", "pyr", "bas"], "article_id"=>827655, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g011", "stats"=>{"downloads"=>1, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_a_single_network_after_modulating_PYR_and_BAS_levels_PYR_and_BAS_increases_left_to_right_/827655", "title"=>"Activity from a single network after modulating PYR and BAS levels (PYR and BAS increases left to right).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251681"], "description"=>"<p>Top shows spike rasters (PYR:red; BAS:green; OLM:blue). Bottom displays somatic voltage from a single PYR cell (red) and average somatic voltage from 800 PYR cells (black).</p>", "links"=>[], "tags"=>["modulating", "pyr"], "article_id"=>827651, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g009", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_a_single_network_after_modulating_PYR_levels_PYR_increases_left_to_right_/827651", "title"=>"Activity from a single network after modulating PYR levels (PYR increases left to right).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251659"], "description"=>"<p>(<b>a</b>) Raster plot showing firing times of cells within the network. Cell types are color-coded. (<b>b</b>) Local field potential (LFP) generated by PYR cells. (<b>c</b>) Voltage traces from soma of different cell types. (<b>d</b>) Average () local field potential power spectrum standard error of the mean (SEM; dotted lines).</p>", "links"=>[], "tags"=>[], "article_id"=>827633, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g003", "stats"=>{"downloads"=>0, "page_views"=>4, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_of_network_at_baseline_/827633", "title"=>"Activity of network at baseline.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251656"], "description"=>"<p>Solid lines represent responses with dynamic and dotted lines represent responses with static . Note that only BAS cell is displayed since it did not fire action potentials in response to AMPA-ergic stimulation. Time axes are relative to AMPA input at ms. (<b>a</b>) EPSP (starting voltage levels aligned vertically for easier comparison of EPSPs), (<b>b</b>) , (<b>c</b>) , and (<b>d</b>) at BAS cell soma.</p>", "links"=>[], "tags"=>["ampa"], "article_id"=>827631, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g002", "stats"=>{"downloads"=>1, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_BAS_cell_response_to_AMPA_stimulus_at_different_levels_of_conductance_/827631", "title"=>"BAS cell response to AMPA stimulus at different levels of conductance.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251675"], "description"=>"<p>Top shows spike rasters (PYR:red; BAS:green; OLM:blue). Bottom displays somatic voltage from a single BAS cell (green) and average somatic voltage from 200 BAS cells (black).</p>", "links"=>[], "tags"=>["modulating", "bas"], "article_id"=>827645, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g007", "stats"=>{"downloads"=>4, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_a_single_network_after_modulating_BAS_levels_BAS_increases_left_to_right_/827645", "title"=>"Activity from a single network after modulating BAS levels (BAS increases left to right).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251655"], "description"=>"<p>Each symbol represents a population: 800 pyramidal cells (P), 200 basket cells (B), 200 OLM cells. Convergence values (number of inputs for an individual synapse) are shown near synapses: GABA receptors (filled circles), AMPA receptors (open circles), NMDA receptors (open squares). External stimulation from other areas was modeled by synaptic bombardment (synapses with truncated lines).</p>", "links"=>[], "tags"=>[], "article_id"=>827630, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g001", "stats"=>{"downloads"=>2, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Schematic_representation_of_the_network_/827630", "title"=>"Schematic representation of the network.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251690"], "description"=>"<p>(<b>a</b>) Theta frequency and (<b>b</b>) amplitude are controlled by PYR , while (<b>c</b>) Gamma frequency and (<b>d</b>) amplitude are largely controlled by BAS . (<b>e</b>) Cross-frequency coupling (gamma amplitude modulation by theta phase) is greatest when theta is strong (high PYR ) with gamma relatively weak. Units are scaled up by 1e3 for readability. (<b>f</b>) Gamma amplitude peaks in the region between (0.5) and (0.8) radians in a complex pattern. (a,b,c,d: average of 900 8s simulations; e,f: average of 25 900 s simulations).</p>", "links"=>[], "tags"=>["coupling", "oscillations", "bas", "pyr", "cells"], "article_id"=>827658, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g012", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Amplitudes_and_coupling_of_oscillations_with_variation_of_density_in_BAS_and_PYR_cells_x_and_y_axes_respectively_/827658", "title"=>"Amplitudes and coupling of oscillations with variation of density in BAS and PYR cells (x- and y-axes, respectively).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251666"], "description"=>"<p>Top shows spike rasters (PYR:red; BAS:green; OLM:blue). Bottom displays somatic voltage from a single OLM cell (blue) and average somatic voltage from 200 OLM cells (black).</p>", "links"=>[], "tags"=>["modulating", "olm"], "article_id"=>827640, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g005", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_a_single_network_after_modulating_OLM_levels_OLM_increases_left_to_right_/827640", "title"=>"Activity from a single network after modulating OLM levels (OLM increases left to right).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251661"], "description"=>"<p>(<b>a</b>) Local field potentials (LFPs). Blue LFP is from baseline simulation. Up (down) arrows indicate directions of increase (decrease) of . (<b>b</b>) Scatter plots of theta (left) and gamma (right) peak frequencies and power (normalized); color code as in (<b>a</b>); each point from a single simulation with different random activation and wiring. Gamma: main panel shows zoom-in of subset of values. Inset shows full set.</p>", "links"=>[], "tags"=>["180", "scaling", "olm"], "article_id"=>827635, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g004", "stats"=>{"downloads"=>0, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_180_simulations_with_scaling_in_OLM_interneurons_/827635", "title"=>"Activity (from 180 simulations) with scaling in OLM interneurons.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251682"], "description"=>"<p>(<b>a</b>) Local field potentials (LFPs). Blue LFP is from baseline simulation. Up (down) arrows indicate directions of increase (decrease) of . (<b>b</b>) Scatter plots of theta and gamma peak frequencies and power (normalized).</p>", "links"=>[], "tags"=>["180", "scaling", "pyramidal"], "article_id"=>827652, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g010", "stats"=>{"downloads"=>0, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_180_simulations_with_scaling_in_both_pyramidal_PYR_and_basket_BAS_cells_/827652", "title"=>"Activity (from 180 simulations) with scaling in both pyramidal (PYR) and basket (BAS) cells.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}
  • {"files"=>["https://ndownloader.figshare.com/files/1251677"], "description"=>"<p>(<b>a</b>) Local field potentials (LFPs). Blue LFP is from baseline simulation. Up (down) arrows indicate directions of increase (decrease) of . (<b>b</b>) Scatter plots of theta and gamma peak frequencies and power (normalized).</p>", "links"=>[], "tags"=>["180", "scaling", "pyramidal"], "article_id"=>827647, "categories"=>["Biological Sciences"], "users"=>["Samuel A. Neymotin", "Markus M. Hilscher", "Thiago C. Moulin", "Yosef Skolnick", "Maciej T. Lazarewicz", "William W. Lytton"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0076285.g008", "stats"=>{"downloads"=>1, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Activity_from_180_simulations_with_scaling_in_pyramidal_PYR_cells_/827647", "title"=>"Activity (from 180 simulations) with scaling in pyramidal (PYR) cells.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-10-18 03:02:32"}

PMC Usage Stats | Further Information

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Relative Metric

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