A New Species of River Dolphin from Brazil or: How Little Do We Know Our Biodiversity
Publication Date
January 22, 2014
Journal
PLOS ONE
Authors
Tomas Hrbek, Vera Maria Ferreira Da Silva, Nicole Dutra, Waleska Gravena, et al
Volume
9
Issue
1
Pages
e83623
DOI
https://dx.plos.org/10.1371/journal.pone.0083623
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0083623
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/24465386
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3898917
Europe PMC
http://europepmc.org/abstract/MED/24465386
Web of Science
000330283100007
Scopus
84899846078
Mendeley
http://www.mendeley.com/research/new-species-river-dolphin-brazil-little-we-know-biodiversity
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{"title"=>"A new species of river dolphin from Brazil or: How little do we know our biodiversity", "type"=>"journal", "authors"=>[{"first_name"=>"Tomas", "last_name"=>"Hrbek", "scopus_author_id"=>"6602402270"}, {"first_name"=>"Vera Maria Ferreira", "last_name"=>"Da Silva", "scopus_author_id"=>"7102297163"}, {"first_name"=>"Nicole", "last_name"=>"Dutra", "scopus_author_id"=>"24586995300"}, {"first_name"=>"Waleska", "last_name"=>"Gravena", "scopus_author_id"=>"24337926100"}, {"first_name"=>"Anthony R.", "last_name"=>"Martin", "scopus_author_id"=>"55708418100"}, {"first_name"=>"Izeni Pires", "last_name"=>"Farias", "scopus_author_id"=>"6603890101"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"sgr"=>"84899846078", "doi"=>"10.1371/journal.pone.0083623", "pui"=>"373020871", "pmid"=>"24465386", "scopus"=>"2-s2.0-84899846078", "issn"=>"19326203", "isbn"=>"1932-6203"}, "id"=>"117558ce-7391-3764-8a34-263e6e3fab87", "abstract"=>"True river dolphins are some of the rarest and most endangered of all vertebrates. They comprise relict evolutionary lineages of high taxonomic distinctness and conservation value, but are afforded little protection. We report the discovery of a new species of a river dolphin from the Araguaia River basin of Brazil, the first such discovery in nearly 100 years. The species is diagnosable by a series of molecular and morphological characters and diverged from its Amazonian sister taxon 2.08 million years ago. The estimated time of divergence corresponds to the separation of the Araguaia-Tocantins basin from the Amazon basin. This discovery highlights the immensity of the deficit in our knowledge of Neotropical biodiversity, as well as vulnerability of biodiversity to anthropogenic actions in an increasingly threatened landscape. We anticipate that this study will provide an impetus for the taxonomic and conservation reanalysis of other taxa shared between the Araguaia and Amazon aquatic ecosystems, as well as stimulate historical biogeographical analyses of the two basins.", "link"=>"http://www.mendeley.com/research/new-species-river-dolphin-brazil-little-we-know-biodiversity", "reader_count"=>293, "reader_count_by_academic_status"=>{"Unspecified"=>5, "Professor > Associate Professor"=>9, "Librarian"=>1, "Researcher"=>43, "Student > Doctoral Student"=>30, "Student > Ph. D. Student"=>48, "Student > Postgraduate"=>18, "Other"=>19, "Student > Master"=>61, "Student > Bachelor"=>40, "Lecturer"=>3, "Lecturer > Senior Lecturer"=>1, "Professor"=>15}, "reader_count_by_user_role"=>{"Unspecified"=>5, "Professor > Associate Professor"=>9, "Librarian"=>1, "Researcher"=>43, "Student > Doctoral Student"=>30, "Student > Ph. D. Student"=>48, "Student > Postgraduate"=>18, "Other"=>19, "Student > Master"=>61, "Student > Bachelor"=>40, "Lecturer"=>3, "Lecturer > Senior Lecturer"=>1, "Professor"=>15}, "reader_count_by_subject_area"=>{"Unspecified"=>11, "Agricultural and Biological Sciences"=>214, "Arts and Humanities"=>2, "Business, Management and Accounting"=>1, "Chemistry"=>3, "Earth and Planetary Sciences"=>9, "Energy"=>1, "Environmental Science"=>35, "Biochemistry, Genetics and Molecular Biology"=>11, "Nursing and Health Professions"=>1, "Medicine and Dentistry"=>2, "Physics and Astronomy"=>1, "Social Sciences"=>1, "Immunology and Microbiology"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>2}, "Social Sciences"=>{"Social Sciences"=>1}, "Physics and Astronomy"=>{"Physics and Astronomy"=>1}, "Unspecified"=>{"Unspecified"=>11}, "Environmental Science"=>{"Environmental Science"=>35}, "Arts and Humanities"=>{"Arts and Humanities"=>2}, "Chemistry"=>{"Chemistry"=>3}, "Energy"=>{"Energy"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>9}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>214}, "Business, Management and Accounting"=>{"Business, Management and Accounting"=>1}, "Nursing and Health Professions"=>{"Nursing and Health Professions"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>11}}, "reader_count_by_country"=>{"Ecuador"=>1, "Argentina"=>1, "French Guiana"=>1, "United States"=>4, "India"=>1, "Greece"=>1, "Czech Republic"=>2, "China"=>1, "Brazil"=>15, "Mexico"=>1, "Australia"=>1, "France"=>1, "Germany"=>3, "Indonesia"=>1}, "group_count"=>7}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1356679"], "description"=>"<p>We used four independent fossil calibration points (indicated as orange bars). Numbers at nodes represent estimates of divergence times with highest posterior probability, while bars around each divergence time estimate represent 95% highest posterior density of the estimate.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "phylogenetic", "divergence", "estimation", "mitochondrial", "dna", "cytochrome"], "article_id"=>909127, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g005", "stats"=>{"downloads"=>6, "page_views"=>362, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bayesian_phylogenetic_analysis_and_divergence_time_estimation_in_BEAST_1_7_1_45_using_the_complete_mitochondrial_DNA_cytochrome_b_gene_/909127", "title"=>"Bayesian phylogenetic analysis and divergence time estimation in BEAST 1.7.1 [45] using the complete mitochondrial DNA cytochrome <i>b</i> gene.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356678"], "description"=>"<p>Factors 1 and 2 are plotted on the X and Y axes, respectively, and ellipses denote 67.53% density contours around each sample group.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "microsatellite", "performed", "ade4"], "article_id"=>909126, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g004", "stats"=>{"downloads"=>2, "page_views"=>43, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Correspondence_analysis_of_the_microsatellite_data_25_performed_in_the_Ade4_package_in_the_R_vers_2_14_1_statistical_program_/909126", "title"=>"Correspondence analysis of the microsatellite data [25] performed in the Ade4 package in the R vers. 2.14.1 statistical program.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356675"], "description"=>"<p>We analyzed 10 nuclear microsatellite loci sampled from 45 <i>I. boliviensis</i>, 44 <i>I. geoffrensis</i> and 32 <i>I. araguaiaensis</i> sp. nov. individuals. Highest posterior probability is associated with three biological groups; mean LnP(K = 3) = −2041.115.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "inference", "structuring"], "article_id"=>909123, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g002", "stats"=>{"downloads"=>2, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bayesian_inference_of_population_structuring_using_STRUCTURE_2_3_3_19_20_/909123", "title"=>"Bayesian inference of population structuring using STRUCTURE 2.3.3 [19], [20].", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356674"], "description"=>"<p>Black outline denotes the limit of the Amazon basin. Question marks denote uncertainty as to which species occurs in the Tocantins River downstream of the Tucuruí dam which potentially delimits the distributions of <i>I. geoffrensis</i> and <i>I. araguaiaensis</i> sp. nov. Bars on the Madeira River represent a series of rapids that delimit the distribution of <i>I. geoffrensis</i> and <i>I. boliviensis</i>. The single bar on the northern limit of the Amazon basin represents the Casiquiare canal which connects the Amazon and Orinoco basins, and is thought to delimit the <i>I. g. humboldtiana</i> subspecies from <i>I. g. geoffrensis</i>.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "subspecies"], "article_id"=>909122, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g001", "stats"=>{"downloads"=>1, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Distribution_map_of_all_known_species_and_subspecies_of_Inia_/909122", "title"=>"Distribution map of all known species and subspecies of <i>Inia</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356683"], "description"=>"<div><p>True river dolphins are some of the rarest and most endangered of all vertebrates. They comprise relict evolutionary lineages of high taxonomic distinctness and conservation value, but are afforded little protection. We report the discovery of a new species of a river dolphin from the Araguaia River basin of Brazil, the first such discovery in nearly 100 years. The species is diagnosable by a series of molecular and morphological characters and diverged from its Amazonian sister taxon 2.08 million years ago. The estimated time of divergence corresponds to the separation of the Araguaia-Tocantins basin from the Amazon basin. This discovery highlights the immensity of the deficit in our knowledge of Neotropical biodiversity, as well as vulnerability of biodiversity to anthropogenic actions in an increasingly threatened landscape. We anticipate that this study will provide an impetus for the taxonomic and conservation reanalysis of other taxa shared between the Araguaia and Amazon aquatic ecosystems, as well as stimulate historical biogeographical analyses of the two basins.</p></div>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "dolphin", "brazil"], "article_id"=>909131, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623", "stats"=>{"downloads"=>18, "page_views"=>76, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_A_New_Species_of_River_Dolphin_from_Brazil_or_How_Little_Do_We_Know_Our_Biodiversity_/909131", "title"=>"A New Species of River Dolphin from Brazil or: How Little Do We Know Our Biodiversity", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356682"], "description"=>"<p>The cranium (6a) and the mandible (6b) of the holotype of <i>Inia araguaiaensis</i> sp. nov.; 10 cm ruler shown.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "cranium", "mandible", "holotype", "10", "cm", "ruler"], "article_id"=>909130, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g006", "stats"=>{"downloads"=>4, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_cranium_6a_and_the_mandible_6b_of_the_holotype_of_Inia_araguaiaensis_sp_nov_10_cm_ruler_shown_/909130", "title"=>"The cranium (6a) and the mandible (6b) of the holotype of <i>Inia araguaiaensis</i> sp. nov.; 10 cm ruler shown.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}
  • {"files"=>["https://ndownloader.figshare.com/files/1356676"], "description"=>"<p>Principal component axes 1 and 2 are plotted on the X and Y axes, respectively, and ellipses denote 67.53% density contours around each sample group.</p>", "links"=>[], "tags"=>["ecology", "biodiversity", "Conservation science", "Evolutionary biology", "Evolutionary processes", "Species extinction", "Evolutionary systematics", "taxonomy", "Animal taxonomy", "phylogenetics", "population genetics", "Zoology", "Animal phylogenetics", "Mammalogy", "microsatellite", "performed", "ade4"], "article_id"=>909124, "categories"=>["Biological Sciences"], "users"=>["Tomas Hrbek", "Vera Maria Ferreira da Silva", "Nicole Dutra", "Waleska Gravena", "Anthony R. Martin", "Izeni Pires Farias"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0083623.g003", "stats"=>{"downloads"=>5, "page_views"=>56, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Principal_component_analysis_of_the_microsatellite_data_25_performed_in_the_Ade4_package_in_the_R_vers_2_14_1_statistical_program_/909124", "title"=>"Principal component analysis of the microsatellite data [25] performed in the Ade4 package in the R vers. 2.14.1 statistical program.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-01-22 04:13:28"}

PMC Usage Stats | Further Information

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