Hexavalent Chromium Reduction under Fermentative Conditions with Lactate Stimulated Native Microbial Communities
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{"title"=>"Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities", "type"=>"journal", "authors"=>[{"first_name"=>"Anil C.", "last_name"=>"Somenahally", "scopus_author_id"=>"36161379600"}, {"first_name"=>"Jennifer J.", "last_name"=>"Mosher", "scopus_author_id"=>"7004996564"}, {"first_name"=>"Tong", "last_name"=>"Yuan", "scopus_author_id"=>"8146159000"}, {"first_name"=>"Mircea", "last_name"=>"Podar", "scopus_author_id"=>"6602710603"}, {"first_name"=>"Tommy J.", "last_name"=>"Phelps", "scopus_author_id"=>"35509444300"}, {"first_name"=>"Steven D.", "last_name"=>"Brown", "scopus_author_id"=>"55712930800"}, {"first_name"=>"Zamin K.", "last_name"=>"Yang", "scopus_author_id"=>"7405435258"}, {"first_name"=>"Terry C.", "last_name"=>"Hazen", "scopus_author_id"=>"7006945153"}, {"first_name"=>"Adam P.", "last_name"=>"Arkin", "scopus_author_id"=>"7006902792"}, {"first_name"=>"Anthony V.", "last_name"=>"Palumbo", "scopus_author_id"=>"7103361924"}, {"first_name"=>"Joy D.", "last_name"=>"Van Nostrand", "scopus_author_id"=>"35312783600"}, {"first_name"=>"Jizhong", "last_name"=>"Zhou", "scopus_author_id"=>"35235999300"}, {"first_name"=>"Dwayne A.", "last_name"=>"Elias", "scopus_author_id"=>"7202565193"}], "year"=>2013, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-84893467540", "sgr"=>"84893467540", "pui"=>"372261498", "isbn"=>"1932-6203", "pmid"=>"24376771", "doi"=>"10.1371/journal.pone.0083909"}, "id"=>"899e87fe-3b1f-3e71-9167-622c5af12fdc", "abstract"=>"Microbial reduction of toxic hexavalent chromium (Cr(VI)) in-situ is a plausible bioremediation strategy in electron-acceptor limited environments. However, higher [Cr(VI)] may impose stress on syntrophic communities and impact community structure and function. The study objectives were to understand the impacts of Cr(VI) concentrations on community structure and on the Cr(VI)-reduction potential of groundwater communities at Hanford, WA. Steady state continuous flow bioreactors were used to grow native communities enriched with lactate (30 mM) and continuously amended with Cr(VI) at 0.0 (No-Cr), 0.1 (Low-Cr) and 3.0 (High-Cr) mg/L. Microbial growth, metabolites, Cr(VI), 16S rRNA gene sequences and GeoChip based functional gene composition were monitored for 15 weeks. Temporal trends and differences in growth, metabolite profiles, and community composition were observed, largely between Low-Cr and High-Cr bioreactors. In both High-Cr and Low-Cr bioreactors, Cr(VI) levels were below detection from week 1 until week 15. With lactate enrichment, native bacterial diversity substantially decreased as Pelosinus spp., and Sporotalea spp., became the dominant groups, but did not significantly differ between Cr concentrations. The Archaea diversity also substantially decreased after lactate enrichment from Methanosaeta (35%), Methanosarcina (17%) and others, to mostly Methanosarcina spp. (95%). Methane production was lower in High-Cr reactors suggesting some inhibition of methanogens. Several key functional genes were distinct in Low-Cr bioreactors compared to High-Cr. Among the Cr resistant microbes, Burkholderia vietnamiensis, Comamonas testosterone and Ralstonia pickettii proliferated in Cr amended bioreactors. In-situ fermentative conditions facilitated Cr(VI) reduction, and as a result 3.0 mg/L Cr(VI) did not impact the overall bacterial community structure.", "link"=>"http://www.mendeley.com/research/hexavalent-chromium-reduction-under-fermentative-conditions-lactate-stimulated-native-microbial-comm", "reader_count"=>26, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Student > Doctoral Student"=>6, "Researcher"=>6, "Student > Ph. D. Student"=>6, "Student > Master"=>3, "Student > Bachelor"=>3, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Student > Doctoral Student"=>6, "Researcher"=>6, "Student > Ph. D. Student"=>6, "Student > Master"=>3, "Student > Bachelor"=>3, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>1, "Environmental Science"=>5, "Biochemistry, Genetics and Molecular Biology"=>6, "Materials Science"=>1, "Agricultural and Biological Sciences"=>10, "Chemistry"=>2, "Psychology"=>1}, "reader_count_by_subdiscipline"=>{"Materials Science"=>{"Materials Science"=>1}, "Chemistry"=>{"Chemistry"=>2}, "Psychology"=>{"Psychology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>10}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>6}, "Unspecified"=>{"Unspecified"=>1}, "Environmental Science"=>{"Environmental Science"=>5}}, "reader_count_by_country"=>{"Colombia"=>1, "United States"=>3, "India"=>1}, "group_count"=>1}

Scopus | Further Information

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Figshare

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  • {"files"=>["https://ndownloader.figshare.com/files/1326521"], "description"=>"<p>(a) Lactate and (b) Acetate concentrations when amended with (X) 0 mg/L Cr(VI), (○) 0.1 mg/L Cr(VI) and (▾) 3.0 mg/L Cr(VI). W = weeks. Error bars indicate 1 standard deviation between replicates.</p>", "links"=>[], "tags"=>["metabolite", "concentrations", "duplicate", "bioreactors", "inoculated", "hanford", "h-100"], "article_id"=>885040, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g002"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Averaged_metabolite_concentrations_in_duplicate_bioreactors_inoculated_with_Hanford_well_H_100_groundwater_/885040", "title"=>"Averaged metabolite concentrations in duplicate bioreactors inoculated with Hanford well H-100 groundwater.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326530"], "description"=>"<p>a) CO<sub>2</sub> and b) CH<sub>4</sub> when amended with (X) 0 mg/L Cr(VI), (○) 0.1 mg/L Cr(VI) and (▾) 3.0 mg/L Cr(VI). W = weeks. Error bars indicate 1 standard deviation between replicates.</p>", "links"=>[], "tags"=>["cr", "concentrations", "averaged", "bioreactors", "inoculated", "hanford", "h-100"], "article_id"=>885042, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g003"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_The_impact_of_Cr_concentrations_on_averaged_gas_concentrations_in_bioreactors_inoculated_with_Hanford_well_H_100_groundwater_/885042", "title"=>"The impact of Cr concentrations on averaged gas concentrations in bioreactors inoculated with Hanford well H-100 groundwater.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326531"], "description"=>"<p>Averaged chromium (closed) and soluble iron (open) reduced after twelve hour incubations of washed cells from the duplicate bioreactors inoculated with Hanford well H-100 groundwater amended with (circle) 0.0 mg/L Cr(VI), (triangle) 0.1 mg/L Cr(VI) and (square) 3.0 mg/L Cr(VI). Each time point represents the calculated reduction rate for that weeks sampling from the bioreactors. W = weeks. Error bars indicate 1 standard deviation between replicates.</p>", "links"=>[], "tags"=>["metal-reduction", "capacities", "bioreactor", "microbial", "communities"], "article_id"=>885043, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g004"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Quantification_of_metal_reduction_capacities_of_the_bioreactor_microbial_communities_over_time_/885043", "title"=>"Quantification of metal-reduction capacities of the bioreactor microbial communities over time.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326535"], "description"=>"<p>(a) Bacteria and (b) Archaea amended with (X) 0 mg/L Cr(VI), (○) 0.1 mg/L Cr(VI) and (▾) 3.0 mg/L Cr(VI). W = weeks.</p>", "links"=>[], "tags"=>["multidimensional", "scaling", "otu", "16s", "rrna", "sequences", "bioreactors", "inoculated", "hanford", "h-100"], "article_id"=>885046, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g005"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Non_metric_multidimensional_scaling_of_OTU_composition_based_on_16S_rRNA_gene_sequences_in_bioreactors_inoculated_with_Hanford_well_H_100_groundwater_/885046", "title"=>"Non-metric multidimensional scaling of OTU composition based on 16S rRNA gene sequences in bioreactors inoculated with Hanford well H-100 groundwater.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326538"], "description"=>"<p>Bioreactors were amended with 0/L Cr(VI) (Lactate), 0.1 mg/L Cr(VI) (Low-Cr) and 3.0 mg/L Cr(VI) (High-Cr). W = weeks.</p>", "links"=>[], "tags"=>["abundance", "abundant", "bacterial", "taxa", "16s", "rrna", "sequencing", "bioreactors", "inoculated", "hanford", "h-100"], "article_id"=>885050, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g006"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Temporal_changes_in_the_relative_abundance_of_the_most_abundant_Bacterial_taxa_detected_by_16S_rRNA_gene_sequencing_in_bioreactors_inoculated_with_Hanford_well_H_100_groundwater_/885050", "title"=>"Temporal changes in the relative abundance of the most abundant Bacterial taxa detected by 16S rRNA gene sequencing in bioreactors inoculated with Hanford well H-100 groundwater.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326541"], "description"=>"<p>Bioreactors were amended with 0/L Cr(VI) (Lactate), 0.1 mg/L Cr(VI) (Low-Cr) and 3.0 mg/L Cr(VI) (High-Cr). W = weeks.</p>", "links"=>[], "tags"=>["abundance", "abundant", "archaea", "16s", "rrna", "sequencing", "bioreactors", "inoculated", "hanford", "h-100"], "article_id"=>885053, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g007"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Temporal_changes_in_the_relative_abundance_of_the_most_abundant_Archaea_detected_by_16S_rRNA_gene_sequencing_in_bioreactors_inoculated_with_Hanford_well_H_100_groundwater_/885053", "title"=>"Temporal changes in the relative abundance of the most abundant Archaea detected by 16S rRNA gene sequencing in bioreactors inoculated with Hanford well H-100 groundwater.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326543"], "description"=>"<p>(a) all genes detected (b) carbon cycling (c) nitrogen cycling and (d) sulfur cycling genes detected in bioreactors inoculated with Hanford well H-100 groundwater amended with (X) 0 mg/L Cr(VI), (○) 0.1 mg/L Cr(VI) and (▾) 3.0 mg/L Cr(VI). W = weeks.</p>", "links"=>[], "tags"=>["multidimensional", "scaling", "geochip", "genes"], "article_id"=>885055, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909.g008"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Non_metric_multidimensional_scaling_of_Geochip_based_functional_genes_composition_/885055", "title"=>"Non-metric multidimensional scaling of Geochip based functional genes composition.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-12-23 03:14:12"}
  • {"files"=>["https://ndownloader.figshare.com/files/1326544"], "description"=>"<div><p>Microbial reduction of toxic hexavalent chromium (Cr(VI)) <i>in-situ</i> is a plausible bioremediation strategy in electron-acceptor limited environments. However, higher [Cr(VI)] may impose stress on syntrophic communities and impact community structure and function. The study objectives were to understand the impacts of Cr(VI) concentrations on community structure and on the Cr(VI)-reduction potential of groundwater communities at Hanford, WA. Steady state continuous flow bioreactors were used to grow native communities enriched with lactate (30 mM) and continuously amended with Cr(VI) at 0.0 (No-Cr), 0.1 (Low-Cr) and 3.0 (High-Cr) mg/L. Microbial growth, metabolites, Cr(VI), 16S rRNA gene sequences and GeoChip based functional gene composition were monitored for 15 weeks. Temporal trends and differences in growth, metabolite profiles, and community composition were observed, largely between Low-Cr and High-Cr bioreactors. In both High-Cr and Low-Cr bioreactors, Cr(VI) levels were below detection from week 1 until week 15. With lactate enrichment, native bacterial diversity substantially decreased as <i>Pelosinus</i> spp., and <i>Sporotalea</i> spp., became the dominant groups, but did not significantly differ between Cr concentrations. The Archaea diversity also substantially decreased after lactate enrichment from <i>Methanosaeta</i> (35%), <i>Methanosarcina</i> (17%) and others, to mostly <i>Methanosarcina</i> spp. (95%). Methane production was lower in High-Cr reactors suggesting some inhibition of methanogens. Several key functional genes were distinct in Low-Cr bioreactors compared to High-Cr. Among the Cr resistant microbes, <i>Burkholderia vietnamiensis</i>, <i>Comamonas testosterone</i> and <i>Ralstonia pickettii</i> proliferated in Cr amended bioreactors. <i>In-situ</i> fermentative conditions facilitated Cr(VI) reduction, and as a result 3.0 mg/L Cr(VI) did not impact the overall bacterial community structure.</p></div>", "links"=>[], "tags"=>["chromium", "fermentative", "lactate", "stimulated", "microbial"], "article_id"=>885056, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Anil C. Somenahally", "Jennifer J. Mosher", "Tong Yuan", "Mircea Podar", "Tommy J. Phelps", "Steven D. Brown", "Zamin K. Yang", "Terry C. Hazen", "Adam P. Arkin", "Anthony V. Palumbo", "Joy D. Van Nostrand", "Jizhong Zhou", "Dwayne A. Elias"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0083909"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hexavalent_Chromium_Reduction_under_Fermentative_Conditions_with_Lactate_Stimulated_Native_Microbial_Communities_/885056", "title"=>"Hexavalent Chromium Reduction under Fermentative Conditions with Lactate Stimulated Native Microbial Communities", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-12-23 03:14:12"}

PMC Usage Stats | Further Information

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Relative Metric

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