Description and Phylogeny of Tetrakeronopsis silvanetoi gen. nov., sp. nov. (Hypotricha, Pseudokeronopsidae), a New Benthic Marine Ciliate from Brazil
Publication Date
February 24, 2014
Journal
PLOS ONE
Authors
Thiago Da Silva Paiva, Amanda Ferreira Cavalcante De Albuquerque, Bárbara Do Nascimento Borges & Maria Lúcia Harada
Volume
9
Issue
2
Pages
e88954
DOI
https://dx.plos.org/10.1371/journal.pone.0088954
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0088954
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/24586456
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3933418
Europe PMC
http://europepmc.org/abstract/MED/24586456
Web of Science
000331880700014
Scopus
84896067024
Mendeley
http://www.mendeley.com/research/description-phylogeny-tetrakeronopsis-silvanetoi-gen-nov-sp-nov-hypotricha-pseudokeronopsidae-new-be
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Mendeley | Further Information

{"title"=>"Description and phylogeny of Tetrakeronopsis silvanetoi gen. nov., sp. nov. (Hypotricha, Pseudokeronopsidae), a new benthic marine ciliate from Brazil", "type"=>"journal", "authors"=>[{"first_name"=>"Thiago Da Silva", "last_name"=>"Paiva", "scopus_author_id"=>"7005950260"}, {"first_name"=>"Amanda Ferreira Cavalcante", "last_name"=>"De Albuquerque", "scopus_author_id"=>"56067428800"}, {"first_name"=>"Bárbara Do Nascimento", "last_name"=>"Borges", "scopus_author_id"=>"36726471800"}, {"first_name"=>"Maria Lúcia", "last_name"=>"Harada", "scopus_author_id"=>"7402782464"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"24586456", "doi"=>"10.1371/journal.pone.0088954", "pui"=>"372599331", "issn"=>"19326203", "sgr"=>"84896067024", "scopus"=>"2-s2.0-84896067024"}, "id"=>"84d0b4b3-b7bf-3bb9-8678-17b8df31b098", "abstract"=>"Pseudokeronopsidae Borror & Wicklow, 1983 are biotechnologically important ciliate protists which produce toxic defense substances; however, their diversity is still little known in Brazil. In the present study, Tetrakeronopsis silvanetoi, a new genus and species of marine pseudokeronopsid hypotrichs is described from samples of water with bottom sediment collected from the coast of São Paulo state. Its phylogenetic affinities to the \"core urostyloids\" are hypothesized based on analyses of the 18S-rDNA marker, and a new subfamily, the Nothoholostichinae subfam. nov., is erected to name the monophylum composed of pseudokeronopsids in which the anterior corona is usually formed by four frontal cirri. In addition, the new combination Monocoronella longissima comb. nov. is proposed for Nothoholosticha longissima (Dragesco & Dragesco-Kernéis, 1986) Li et al., 2009.", "link"=>"http://www.mendeley.com/research/description-phylogeny-tetrakeronopsis-silvanetoi-gen-nov-sp-nov-hypotricha-pseudokeronopsidae-new-be", "reader_count"=>7, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Researcher"=>1, "Other"=>2, "Student > Bachelor"=>1, "Professor"=>2}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Researcher"=>1, "Other"=>2, "Student > Bachelor"=>1, "Professor"=>2}, "reader_count_by_subject_area"=>{"Unspecified"=>1, "Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>3, "Physics and Astronomy"=>1}, "reader_count_by_subdiscipline"=>{"Physics and Astronomy"=>{"Physics and Astronomy"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>3}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Unspecified"=>{"Unspecified"=>1}}, "reader_count_by_country"=>{"United States"=>1, "Mexico"=>1}, "group_count"=>0}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1397130"], "description"=>"<p>Legend: AM – adoral membranelles; AZM – adoral zone (of membranelles); CV – coefficient of variation; DK1– left dorsal kinety; DK2– middle dorsal kinety; DK3– right dorsal kinety; LMR – left marginal cirral row; M – median; Max – maximum value observed; Mean – arithmetic mean; Min – minimum value observed; N – sample size; RMR – right marginal cirral row; SD – standard deviation; SE – standard error.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "characterization"], "article_id"=>943418, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.t001", "stats"=>{"downloads"=>1, "page_views"=>30, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Morphometric_characterization_of_Tetrakeronopsis_silvanetoi_gen_nov_sp_nov_/943418", "title"=>"Morphometric characterization of <i>Tetrakeronopsis silvanetoi</i> gen. nov., sp. nov.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-02-24 03:39:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1397125"], "description"=>"<p><b>A.</b> Holotype specimen viewed from dorsal side, showing the disposition of nuclear figure; <b>B.</b> Detail of nuclear apparatus shown from ventral side; <b>C.</b> Specimen showing macronuclear DNA replication bands (arrowheads); <b>D.</b> Proter of a late divider. Arrowheads show fronto-ventral set of juvenile cirri; <b>E.</b> Dorsal side of late divider opisthe showing juvenile dorsal kineties (arrowheads); <b>F.</b> Late divider showing morphogenesis of nuclear apparatus. Black arrowhead points to dividing micronucleus; white arrowheads show dividing macronuclei; <b>G.</b> Ventral side of reorganizer. Arrowheads indicate newly formed transverse cirri. Legend: AZMp – adoral zone (of membranelles) of proter; AZMr – adoral zone (of membranelles) of reorganizer; FTCp – frontoterminal cirri of proter; FTCr – frontoterminal cirri of reorganizer; LMRp – left marginal cirral row of proter; LMRr – left marginal row of reorganizer; Ma – macronuclear nodules; Mi – micronucleus; PTCr – pretransverse cirri of reorganizer; RMRp – right marginal cirral row of proter; RMRr – right marginal cirral row of reorganizer. Scale bars: <b>A.</b> 100 µm; <b>B–D</b>., <b>G</b>. 20 µm.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "micrographs"], "article_id"=>943413, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.g003", "stats"=>{"downloads"=>0, "page_views"=>33, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Optical_micrographs_of_Tetrakeronopsis_silvanetoi_after_protargol_impregnation_/943413", "title"=>"Optical micrographs of <i>Tetrakeronopsis silvanetoi</i> after protargol-impregnation.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-02-24 03:39:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1397124"], "description"=>"<p><b>A.</b> Scanning electron microscopy image showing aspects of anterior region of body. Asterisk marks peristomal lip; black arrowheads point to dorsal bristles; white arrowheads show longitudinal ventral groove; <b>B–H.</b> Specimens after protargol-impregnation. <b>B.</b> Ventral side of specimen showing detail of infundibular fibers (black arrowheads). The white arrowhead shows buccal cirrus; <b>C.</b> Detail of anterior region of body after protargol-impregnation; <b>D.</b> Posterior ventral region, showing transverse ciliature; <b>E.</b> Posterior termini of dorsal kineties. The arrowhead indicates the terminus of right dorsal kinety; <b>F.</b> Detail of adoral zone showing gaps in lapel membranelles (arrowheads); <b>G.</b> Detail of anterior region of body, dorsal side. The black arrowheads show dorsal kineties, and the white arrowhead indicates the gap which splits the adoral zone; <b>H.</b> Detail of dorsolaterally placed adoral membranelles in the distal region of lapel (white arrowhead) and the crown adoral membranelles (black arrowhead). Legend: AZM – adoral zone (of membranelles); BC – buccal cirrus; E – endoral; FC(n) – frontal cirrus; FTC – frontoterminal cirri; PBC(n) – parabuccal cirrus; LMR – left marginal cirral row; MV – midventral complex; P – paroral; PTC – pretransverse cirri; RMR – right marginal cirral row; TC – transverse cirri. Scale bars: <b>A.</b> 10 µm; <b>B–H.</b> 20 µm.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "optical", "micrographs"], "article_id"=>943412, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.g002", "stats"=>{"downloads"=>2, "page_views"=>25, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Electron_and_optical_micrographs_of_Tetrakeronopsis_silvanetoi_/943412", "title"=>"Electron and optical micrographs of <i>Tetrakeronopsis silvanetoi</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-02-24 03:39:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1397129"], "description"=>"<p>Morphological comparison among genera of the Nothoholostichinae subfam. nov.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "genera", "nothoholostichinae"], "article_id"=>943417, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.t003", "stats"=>{"downloads"=>0, "page_views"=>24, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Morphological_comparison_among_genera_of_the_Nothoholostichinae_subfam_nov_/943417", "title"=>"Morphological comparison among genera of the Nothoholostichinae subfam. nov.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-02-24 03:39:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1397127"], "description"=>"<p>nov. (rectangle) within the context of studied data. NCBI/GenBank accession codes are displayed left of species names.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "nucleotide", "matrix", "containing", "pseudokeronopsidae", "positions", "markers", "nothoholostichinae"], "article_id"=>943415, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.g005", "stats"=>{"downloads"=>1, "page_views"=>49, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Part_of_the_analyzed_nucleotide_matrix_containing_the_Pseudokeronopsidae_and_showing_the_positions_that_are_identity_markers_for_the_Nothoholostichinae_subfam_/943415", "title"=>"Part of the analyzed nucleotide matrix containing the Pseudokeronopsidae and showing the positions that are identity markers for the Nothoholostichinae subfam.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-02-24 03:39:39"}
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  • {"files"=>["https://ndownloader.figshare.com/files/1397126"], "description"=>"<p>The numbers associated with nodes are Bayesian posterior probabilities and maximum-likelihood (ML) bootstrap values, respectively. NCBI/GenBank access codes are displayed left of species names. Legend: * – full support; - – support <50%; ? – cluster not hypothesized in the ML tree. Scale bar: five substitutions per 100 nucleotide positions.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics", "inference", "phylogenetic", "urostyloids"], "article_id"=>943414, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.g004", "stats"=>{"downloads"=>2, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Bayesian_inference_BI_phylogenetic_tree_of_the_core_urostyloids_showing_the_position_of_Tetrakeronopsis_silvanetoi_and_the_Nothoholostichinae_/943414", "title"=>"Bayesian inference (BI) phylogenetic tree of the core urostyloids showing the position of <i>Tetrakeronopsis silvanetoi</i> and the Nothoholostichinae.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-02-24 03:39:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/1397123"], "description"=>"<p><b>A–D.</b> Schematic diagrams representing the ciliature organization of <i>T. silvanetoi</i> after protargol-impregnation. <b>A.</b> Detail of anterior region of body showing frontal and oral ciliatures. The black arrowhead points to anteriormost midventral cirral pair, and the white arrowheads show a gap in the lapel adoral membranelles; <b>B.</b> Detail of dorsal side showing anterior dorsal ciliature; <b>C.</b> Ventral ciliature; <b>D.</b> Dorsal ciliature; <b>E–G.</b> Live organism. <b>E.</b> Specimen showing habitus. Arrowhead points to adoral zone; <b>F.</b> Cytoplasmic inclusions. Black arrowheads mark ring-shaped bodies; white arrowheads mark globular bodies. <b>G</b>. Detail of cortical granules (arrowheads). Legend: AZM – adoral zone (of membranelles); BC – buccal cirrus; DK – dorsal kineties; E – endoral; FC(n) – frontal cirrus; FTC – frontoterminal cirri; PBC(n) – parabuccal cirrus; LMR – left marginal cirral row; MV – midventral complex; P – paroral; PTC – pretransverse cirri; RMR – right marginal cirral row; TC – transverse cirri. Scale bars: <b>C–D</b>. 60 µm; <b>F–G</b>. 4 µm.</p>", "links"=>[], "tags"=>["ecology", "Marine ecology", "Evolutionary biology", "Evolutionary systematics", "taxonomy", "Microbial taxonomy", "Molecular systematics", "phylogenetics", "Marine biology", "microbiology", "Protozoology", "Protozoan classification", "Zoology", "Animal phylogenetics"], "article_id"=>943411, "categories"=>["Biological Sciences"], "users"=>["Thiago da Silva Paiva", "Amanda Ferreira Cavalcante de Albuquerque", "Bárbara do Nascimento Borges", "Maria Lúcia Harada"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0088954.g001", "stats"=>{"downloads"=>3, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Tetrakeronopsis_silvanetoi_/943411", "title"=>"<i>Tetrakeronopsis silvanetoi</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-02-24 03:39:39"}

PMC Usage Stats | Further Information

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Relative Metric

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