rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
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{"title"=>"rAvis: An R-package for downloading information stored in proyecto AVIS, a citizen science bird project", "type"=>"journal", "authors"=>[{"first_name"=>"Sara", "last_name"=>"Varela", "scopus_author_id"=>"35068623900"}, {"first_name"=>"Javier", "last_name"=>"González-Hernández", "scopus_author_id"=>"56108622300"}, {"first_name"=>"Eduardo", "last_name"=>"Casabella", "scopus_author_id"=>"56108267400"}, {"first_name"=>"Rafael", "last_name"=>"Barrientos", "scopus_author_id"=>"22133778000"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"24626233", "sgr"=>"84897979779", "doi"=>"10.1371/journal.pone.0091650", "scopus"=>"2-s2.0-84897979779", "pui"=>"372799571", "issn"=>"19326203"}, "id"=>"4322a29e-3f3d-3edb-a355-ff380b258741", "abstract"=>"Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and international projects, citizen science repositories often lack specific Application Programming Interfaces (APIs) to connect them to the scientific environments. Thus, it is necessary to develop simple routines to allow researchers to take advantage of the information collected by smaller citizen science projects, for instance, programming specific packages to connect them to popular scientific environments (like R). Here, we present rAvis, an R-package to connect R-users with Proyecto AVIS (http://proyectoavis.com), a Spanish citizen science project with more than 82,000 bird observation records. We develop several functions to explore the database, to plot the geographic distribution of the species occurrences, and to generate personal queries to the database about species occurrences (number of individuals, distribution, etc.) and birdwatcher observations (number of species recorded by each collaborator, UTMs visited, etc.). This new R-package will allow scientists to access this database and to exploit the information generated by Spanish birdwatchers over the last 40 years.", "link"=>"http://www.mendeley.com/research/ravis-rpackage-downloading-information-stored-proyecto-avis-citizen-science-bird-project", "reader_count"=>36, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Librarian"=>1, "Researcher"=>13, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>4, "Student > Postgraduate"=>2, "Student > Master"=>5, "Other"=>2, "Student > Bachelor"=>5, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Librarian"=>1, "Researcher"=>13, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>4, "Student > Postgraduate"=>2, "Student > Master"=>5, "Other"=>2, "Student > Bachelor"=>5, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Engineering"=>2, "Environmental Science"=>5, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>15, "Design"=>1, "Chemistry"=>1, "Social Sciences"=>3, "Computer Science"=>2, "Earth and Planetary Sciences"=>3}, "reader_count_by_subdiscipline"=>{"Design"=>{"Design"=>1}, "Engineering"=>{"Engineering"=>2}, "Chemistry"=>{"Chemistry"=>1}, "Social Sciences"=>{"Social Sciences"=>3}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>3}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>15}, "Computer Science"=>{"Computer Science"=>2}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>5}}, "reader_count_by_country"=>{"United States"=>1, "China"=>1, "Brazil"=>1, "France"=>1, "Switzerland"=>1, "Spain"=>2}, "group_count"=>7}

Scopus | Further Information

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Figshare

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  • {"files"=>["https://ndownloader.figshare.com/files/1419472"], "description"=>"<p>Data collected by amateur birdwatchers and stored in Proyecto AVIS show the same patterns as data collected by scientists, like scale invariant relationship of the frequency distribution of the number of observations per species (A-B-C) and scale invariant relationship of the frequency distribution of the number of UTMs per species (E-F-G).</p>", "links"=>[], "tags"=>["Computational biology", "Biological data management", "ecology", "Community Ecology", "Global change ecology", "Macroecology", "Population ecology", "Population biology", "Zoology", "Ornithology", "software engineering", "Software tools", "amateur", "birdwatchers", "stored", "proyecto", "avis", "patterns", "invariant", "observations", "utms"], "article_id"=>961478, "categories"=>["Biological Sciences"], "users"=>["Sara Varela", "Javier González-Hernández", "Eduardo Casabella", "Rafael Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0091650.g001", "stats"=>{"downloads"=>1, "page_views"=>20, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Data_collected_by_amateur_birdwatchers_and_stored_in_Proyecto_AVIS_show_the_same_patterns_as_data_collected_by_scientists_like_scale_invariant_relationship_of_the_frequency_distribution_of_the_number_of_observations_per_species_A_B_C_and_scale_invariant_/961478", "title"=>"Data collected by amateur birdwatchers and stored in Proyecto AVIS show the same patterns as data collected by scientists, like scale invariant relationship of the frequency distribution of the number of observations per species (A-B-C) and scale invariant relationship of the frequency distribution of the number of UTMs per species (E-F-G).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-03-13 09:58:17"}
  • {"files"=>["https://ndownloader.figshare.com/files/1419473"], "description"=>"<p>Outputs of the function <i>avisMapSpecies</i> setting the parameter map as ‘phys’ (A), or ‘admin’ (B) with the <i>Falco tinnunculus</i> records as an example.</p>", "links"=>[], "tags"=>["Computational biology", "Biological data management", "ecology", "Community Ecology", "Global change ecology", "Macroecology", "Population ecology", "Population biology", "Zoology", "Ornithology", "software engineering", "Software tools", "parameter", "records"], "article_id"=>961479, "categories"=>["Biological Sciences"], "users"=>["Sara Varela", "Javier González-Hernández", "Eduardo Casabella", "Rafael Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0091650.g002", "stats"=>{"downloads"=>1, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Outputs_of_the_function_avisMapSpecies_setting_the_parameter_map_as_phys_A_or_admin_B_with_the_Falco_tinnunculus_records_as_an_example_/961479", "title"=>"Outputs of the function <i>avisMapSpecies</i> setting the parameter map as ‘phys’ (A), or ‘admin’ (B) with the <i>Falco tinnunculus</i> records as an example.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-03-13 09:58:17"}

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