Effect of Feeding Palm Oil By-Products Based Diets on Total Bacteria, Cellulolytic Bacteria and Methanogenic Archaea in the Rumen of Goats
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{"title"=>"Effect of feeding palm oil by-products based diets on total bacteria, cellulolytic bacteria and methanogenic archaea in the rumen of goats", "type"=>"journal", "authors"=>[{"first_name"=>"Abdelrahim", "last_name"=>"Abubakr", "scopus_author_id"=>"55504408200"}, {"first_name"=>"Abdul Razak", "last_name"=>"Alimon", "scopus_author_id"=>"6603104909"}, {"first_name"=>"Halimatun", "last_name"=>"Yaakub", "scopus_author_id"=>"6506151970"}, {"first_name"=>"Norhani", "last_name"=>"Abdullah", "scopus_author_id"=>"56211692200"}, {"first_name"=>"Michael", "last_name"=>"Ivan", "scopus_author_id"=>"7006092244"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"sgr"=>"84899767109", "doi"=>"10.1371/journal.pone.0095713", "pui"=>"373006335", "pmid"=>"24756125", "scopus"=>"2-s2.0-84899767109", "issn"=>"19326203", "isbn"=>"1932-6203"}, "id"=>"67709c9f-456b-3cf6-82cd-96d7e8fa62f7", "abstract"=>"Rumen microorganisms are responsible for digestion and utilization of dietary feeds by host ruminants. Unconventional feed resources could be used as alternatives in tropical areas where feed resources are insufficient in terms of quality and quantity. The objective of the present experiment was to evaluate the effect of diets based on palm oil (PO), decanter cake (DC) or palm kernel cake (PKC) on rumen total bacteria, selected cellulolytic bacteria, and methanogenic archaea. Four diets: control diet (CD), decanter cake diet (DCD), palm kernel cake diet (PKCD) and CD plus 5% PO diet (CPOD) were fed to rumen cannulated goats and rumen samples were collected at the start of the experimental diets (day 0) and on days 4, 6, 8, 12, 18, 24 and 30 post dietary treatments. Feeding DCD and PKCD resulted in significantly higher (P<0.05) DNA copy number of total bacteria, Fibrobacter succinogenes, Ruminococcus flavefeciens, and Ruminococcus albus. Rumen methanogenic archaea was significantly lower (P<0.05) in goats fed PKCD and CPOD and the trend showed a severe reduction on days 4 and 6 post experimental diets. In conclusion, results indicated that feeding DCD and PKC increased the populations of cellulolytic bacteria and decreased the density of methanogenic archaea in the rumen of goats.", "link"=>"http://www.mendeley.com/research/effect-feeding-palm-oil-byproducts-based-diets-total-bacteria-cellulolytic-bacteria-methanogenic-arc", "reader_count"=>29, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Librarian"=>1, "Researcher"=>3, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>5, "Student > Postgraduate"=>3, "Student > Master"=>3, "Other"=>3, "Student > Bachelor"=>3, "Lecturer"=>2, "Professor"=>3}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Librarian"=>1, "Researcher"=>3, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>5, "Student > Postgraduate"=>3, "Student > Master"=>3, "Other"=>3, "Student > Bachelor"=>3, "Lecturer"=>2, "Professor"=>3}, "reader_count_by_subject_area"=>{"Environmental Science"=>1, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>22, "Veterinary Science and Veterinary Medicine"=>1, "Chemical Engineering"=>1, "Chemistry"=>1, "Computer Science"=>1, "Energy"=>1}, "reader_count_by_subdiscipline"=>{"Chemistry"=>{"Chemistry"=>1}, "Energy"=>{"Energy"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>22}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Environmental Science"=>{"Environmental Science"=>1}, "Chemical Engineering"=>{"Chemical Engineering"=>1}, "Veterinary Science and Veterinary Medicine"=>{"Veterinary Science and Veterinary Medicine"=>1}}, "reader_count_by_country"=>{"United States"=>1, "Chile"=>1, "Australia"=>1, "Thailand"=>1, "Indonesia"=>1}, "group_count"=>0}

Scopus | Further Information

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Figshare

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  • {"files"=>["https://ndownloader.figshare.com/files/1553057"], "description"=>"<p>CD (control diet), DCD (decanter cake diet), PKCD (palm kernel cake diet) and CPOD (control+5% palm oil diet). Vertical bars are standard error of the mean (SEM).</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "dietary", "runm", "goats", "days"], "article_id"=>1073059, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.g003", "stats"=>{"downloads"=>1, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Effect_of_dietary_treatment_on_population_of_R_albus_10_6_ml_in_the_runm_of_goats_at_different_days_of_feeding_/1073059", "title"=>"Effect of dietary treatment on population of <i>R. albus</i> (×10<sup>6</sup>/ml) in the runm of goats at different days of feeding.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-04-22 10:01:49"}
  • {"files"=>["https://ndownloader.figshare.com/files/1553039"], "description"=>"<p>CD (control diet), DCD (decanter cake diet), PKCD (palm kernel cake diet) and CPOD (control+5% palm oil diet). Vertical bars are standard error of the mean (SEM).</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "dietary", "treatments", "rumen", "goats", "days"], "article_id"=>1073044, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.g001", "stats"=>{"downloads"=>0, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Effect_of_dietary_treatments_on_population_of_total_bacteria_10_10_ml_in_the_rumen_of_goats_at_different_days_of_feeding_/1073044", "title"=>"Effect of dietary treatments on population of total bacteria (×10<sup>10</sup>/ml) in the rumen of goats at different days of feeding.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-04-22 10:01:49"}
  • {"files"=>["https://ndownloader.figshare.com/files/1553072"], "description"=>"<p>PCR primers for real time-PCR assay.</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "primers", "time-pcr"], "article_id"=>1073073, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.t002", "stats"=>{"downloads"=>3, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_PCR_primers_for_real_time_PCR_assay_/1073073", "title"=>"PCR primers for real time-PCR assay.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-04-22 10:01:49"}
  • {"files"=>["https://ndownloader.figshare.com/files/1553069"], "description"=>"1<p>CD (control diet), DCD (decanter cake diet), PKCD (palm kernel cake diet) and CPOD (control+5% palm oil diet).</p><p>NS not significant statistically (<i>P</i>>0.05).</p>a,b,c<p>Means in the same row with different superscripts are significantly different.</p><p>*<i>P</i><0.05, **<i>P</i><0.01, ***<i>P</i><0.001.</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "dietary", "treatments", "sampling", "microbial", "rumen"], "article_id"=>1073070, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.t003", "stats"=>{"downloads"=>4, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Table_3_Effect_of_dietary_treatments_and_day_of_sampling_on_microbial_population_copies_ml_in_the_rumen_of_goats_/1073070", "title"=>"Table <b>3.</b> Effect of dietary treatments and day of sampling on microbial population (copies/ml) in the rumen of goats.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-04-22 10:01:49"}
  • {"files"=>["https://ndownloader.figshare.com/files/1553044"], "description"=>"<p>CD (control diet), DCD (decanter cake diet), PKCD (palm kernel cake diet) and CPOD (control+5% palm oil diet). Vertical bars are standard error of the mean (SEM).</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "dietary", "treatments", "rumen", "goats", "days"], "article_id"=>1073046, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.g002", "stats"=>{"downloads"=>1, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Effect_of_dietary_treatments_on_population_of_F_succinogenes_10_9_ml_in_the_rumen_of_goats_at_different_days_of_feeding_/1073046", "title"=>"Effect of dietary treatments on population of <i>F. succinogenes</i> (×10<sup>9</sup>/ml) in the rumen of goats at different days of feeding.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-04-22 10:01:49"}
  • {"files"=>["https://ndownloader.figshare.com/files/1553076"], "description"=>"<p>PKC, palm kernel cake; DC, decanter cake; CD, control diet; DCD, decanter cake diet; PKCD, palm kernel cake diet; CPOD, control plus 5% palm oil diet.</p>", "links"=>[], "tags"=>["Pathology and laboratory medicine", "pathogenesis", "Host-pathogen interactions", "agriculture", "Animal management", "Animal performance", "Animal production", "microbiology", "Archaean biology", "Veterinary science", "Veterinary anatomy", "Animal digestive anatomy", "Veterinary microbiology", "decanter", "kernel"], "article_id"=>1073078, "categories"=>["Biological Sciences"], "users"=>["Abdelrahim Abubakr", "Abdul Razak Alimon", "Halimatun Yaakub", "Norhani Abdullah", "Michael Ivan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0095713.t001", "stats"=>{"downloads"=>15, "page_views"=>134, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Ingredients_and_their_chemical_composition_DM_of_decanter_cake_palm_kernel_cake_and_experimental_diets_/1073078", "title"=>"Ingredients (%) and their chemical composition (% DM) of decanter cake, palm kernel cake and experimental diets.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-04-22 10:01:49"}

PMC Usage Stats | Further Information

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  • {"unique-ip"=>"6", "full-text"=>"5", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"2"}
  • {"unique-ip"=>"8", "full-text"=>"6", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"8"}
  • {"unique-ip"=>"15", "full-text"=>"13", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"9"}
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  • {"unique-ip"=>"11", "full-text"=>"9", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"8"}
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  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"10"}
  • {"unique-ip"=>"9", "full-text"=>"11", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"13", "full-text"=>"10", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"11"}
  • {"unique-ip"=>"8", "full-text"=>"7", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"12"}
  • {"unique-ip"=>"13", "full-text"=>"12", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"1"}
  • {"unique-ip"=>"17", "full-text"=>"7", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"2", "year"=>"2015", "month"=>"11"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
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  • {"unique-ip"=>"5", "full-text"=>"4", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
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  • {"unique-ip"=>"7", "full-text"=>"7", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"9", "full-text"=>"13", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"6", "full-text"=>"7", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
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  • {"unique-ip"=>"5", "full-text"=>"5", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"6", "full-text"=>"8", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"4", "full-text"=>"4", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"4", "full-text"=>"3", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"9", "full-text"=>"10", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"9", "full-text"=>"9", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"13", "full-text"=>"13", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}
  • {"unique-ip"=>"10", "full-text"=>"11", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"4", "full-text"=>"5", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
  • {"unique-ip"=>"12", "full-text"=>"12", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"3"}
  • {"unique-ip"=>"9", "full-text"=>"9", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"1"}
  • {"unique-ip"=>"12", "full-text"=>"13", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"13", "full-text"=>"12", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"11"}
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  • {"unique-ip"=>"12", "full-text"=>"11", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
  • {"unique-ip"=>"11", "full-text"=>"18", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
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  • {"unique-ip"=>"10", "full-text"=>"12", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"8"}
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  • {"unique-ip"=>"10", "full-text"=>"8", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"10"}

Relative Metric

{"start_date"=>"2014-01-01T00:00:00Z", "end_date"=>"2014-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Microbiology", "average_usage"=>[317]}, {"subject_area"=>"/Biology and life sciences/Molecular biology", "average_usage"=>[292, 461]}, {"subject_area"=>"/Biology and life sciences/Nutrition", "average_usage"=>[289]}, {"subject_area"=>"/Medicine and health sciences/Nutrition", "average_usage"=>[285]}]}
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