Rhythms and Community Dynamics of a Hydrothermal Tubeworm Assemblage at Main Endeavour Field – A Multidisciplinary Deep-Sea Observatory Approach
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{"title"=>"Rhythms and community dynamics of a hydrothermal tubeworm assemblage at main endeavour field - A multidisciplinary deep-sea observatory approach", "type"=>"journal", "authors"=>[{"first_name"=>"Daphne", "last_name"=>"Cuvelier", "scopus_author_id"=>"27867552500"}, {"first_name"=>"Pierre", "last_name"=>"Legendre", "scopus_author_id"=>"7102941427"}, {"first_name"=>"Agathe", "last_name"=>"Laes", "scopus_author_id"=>"56167407100"}, {"first_name"=>"Pierre Marie", "last_name"=>"Sarradin", "scopus_author_id"=>"7003825993"}, {"first_name"=>"Jozée", "last_name"=>"Sarrazin", "scopus_author_id"=>"23009879900"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"scopus"=>"2-s2.0-84901044456", "doi"=>"10.1371/journal.pone.0096924", "sgr"=>"84901044456", "isbn"=>"1932-6203", "pmid"=>"24810603", "issn"=>"19326203", "pui"=>"373124394"}, "id"=>"dff1b602-65e3-32f4-9af3-7fb2c928edf3", "abstract"=>"The NEPTUNE cabled observatory network hosts an ecological module called TEMPO-mini that focuses on hydrothermal vent ecology and time series, granting us real-time access to data originating from the deep sea. In 2011-2012, during TEMPO-mini's first deployment on the NEPTUNE network, the module recorded high-resolution imagery, temperature, iron (Fe) and oxygen on a hydrothermal assemblage at 2186 m depth at Main Endeavour Field (North East Pacific). 23 days of continuous imagery were analysed with an hourly frequency. Community dynamics were analysed in detail for Ridgeia piscesae tubeworms, Polynoidae, Pycnogonida and Buccinidae, documenting faunal variations, natural change and biotic interactions in the filmed tubeworm assemblage as well as links with the local environment. Semi-diurnal and diurnal periods were identified both in fauna and environment, revealing the influence of tidal cycles. Species interactions were described and distribution patterns were indicative of possible microhabitat preference. The importance of high-resolution frequencies (<1 h) to fully comprehend rhythms in fauna and environment was emphasised, as well as the need for the development of automated or semi-automated imagery analysis tools.", "link"=>"http://www.mendeley.com/research/rhythms-community-dynamics-hydrothermal-tubeworm-assemblage-main-endeavour-field-multidisciplinary-d", "reader_count"=>41, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>2, "Librarian"=>1, "Researcher"=>9, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>9, "Student > Postgraduate"=>2, "Student > Master"=>6, "Other"=>5, "Student > Bachelor"=>2}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>2, "Librarian"=>1, "Researcher"=>9, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>9, "Student > Postgraduate"=>2, "Student > Master"=>6, "Other"=>5, "Student > Bachelor"=>2}, "reader_count_by_subject_area"=>{"Unspecified"=>4, "Environmental Science"=>8, "Biochemistry, Genetics and Molecular Biology"=>3, "Agricultural and Biological Sciences"=>16, "Chemistry"=>2, "Immunology and Microbiology"=>1, "Earth and Planetary Sciences"=>7}, "reader_count_by_subdiscipline"=>{"Chemistry"=>{"Chemistry"=>2}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>7}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>16}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>3}, "Unspecified"=>{"Unspecified"=>4}, "Environmental Science"=>{"Environmental Science"=>8}}, "reader_count_by_country"=>{"Canada"=>1, "United States"=>2}, "group_count"=>5}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1490718"], "description"=>"<p>Faunal densities (ind/m<sup>2</sup>) as assessed through image analyses with an hourly frequency. The microbial coverage (%) was measured with a 4 hour frequency. All data span from 2011-10-07 at 8 h UTC to 2011-10-30 at 14 h UTC or 559 hourly observations with some missing values (n = 23).</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "faunal", "densities", "imagery"], "article_id"=>1021059, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g005", "stats"=>{"downloads"=>4, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Hourly_faunal_densities_for_the_continuous_imagery_period_/1021059", "title"=>"Hourly faunal densities for the continuous imagery period.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490720"], "description"=>"<p>Whittacker-Robinson periodograms computed for faunal densities, with periods spanning from 2 to <i>n</i>/2. Length of the series <i>n</i>: 559 hourly observations with some missing values (<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0096924#pone-0096924-g005\" target=\"_blank\">Fig. 5</a>). Abscissa: periods in hours. The Whittaker-Robinson statistic on the ordinate is the amplitude of variation in the Buys-Ballot table, measured as the standard deviation of the table column means of the table. Black squares are significant periods for p<0.05.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "periodograms", "faunal"], "article_id"=>1021061, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g006", "stats"=>{"downloads"=>0, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Whittacker_Robinson_periodograms_for_faunal_densities_/1021061", "title"=>"Whittacker-Robinson periodograms for faunal densities.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490722"], "description"=>"<p>Heat maps showing the distribution of the three mobile species on the filmed tubeworm bush, based on the number of observations during the 559-coded per bin (1 bin = ∼1.125 cm<sup>2</sup>). Colour-coded legends along with the corresponding number of observations can be found next to each plot.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "maps", "pycnogonids"], "article_id"=>1021063, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g007", "stats"=>{"downloads"=>2, "page_views"=>3, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Heat_maps_of_polynoids_pycnogonids_and_buccinids_/1021063", "title"=>"Heat maps of polynoids, pycnogonids and buccinids.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490723"], "description"=>"<p>Variation partitioning for the faunal density data (excluding the zoarcid fish densities), using two types of explanatory variables: X = a selection of different temperature probes, and Y = significant temporal eigenfunctions, retained in both cases by forward selection on the faunal density dataset. [b] is the variation explained jointly by X and Y. The residuals represent the amount of variation not explained by a linear model of the two sets of explanatory variables.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "partitioning", "faunal"], "article_id"=>1021064, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g008", "stats"=>{"downloads"=>0, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Variation_partitioning_for_the_faunal_density_data_/1021064", "title"=>"Variation partitioning for the faunal density data.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490727"], "description"=>"<p>Whittaker-Robinson periodograms computed for the detrended temperature values of all five probes (locations: see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0096924#pone-0096924-g002\" target=\"_blank\">Fig. 2</a>) during the 559 h or 23 day continuous imagery period. Abscissa: periods in hours. The Whittaker-Robinson statistic on the ordinate is the amplitude of variation in the Buys-Ballot table, measured as the standard deviation of the table column means. Black squares are significant periods at p<0.05.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "periodograms"], "article_id"=>1021068, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g009", "stats"=>{"downloads"=>1, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Whittaker_Robinson_periodograms_for_5_temperature_probes_/1021068", "title"=>"Whittaker-Robinson periodograms for 5 temperature probes.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490728"], "description"=>"<p>The observed values (Obs. Count) larger than the corresponding expected values (Exp. Count) are in bold. Values of S calculated for a taxon and its conspecific neighbour larger than 0 indicate that the taxon is segregated; the larger the value of S, the more pronounced the segregation. These values of S (between conspecific neighbours) closer to 0 are consistent with random labelling of the neighbours of species. The S between two different taxa is less than 0 because the observed frequency of a taxon as a neighbour is smaller than expected under random labelling.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "spatial", "segregation", "taxa", "neighbours", "hourly", "observations", "23", "days"], "article_id"=>1021069, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.t001", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Measures_of_spatial_segregation_31_between_three_mobile_taxa_and_neighbours_based_on_all_hourly_observations_during_the_23_days_continuous_recording_period_n_559_23_missing_/1021069", "title"=>"Measures of spatial segregation [31] between three mobile taxa and neighbours based on all hourly observations during the 23 days continuous recording period (n = 559–23 missing).", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490729"], "description"=>"<p>Highest values for temperature were in bold. Min: minimum, max: maximum, stdev: standard deviation, var: variance.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "recorded", "vicinity", "tempo-mini", "module", "grotto", "hydrothermal"], "article_id"=>1021070, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.t002", "stats"=>{"downloads"=>0, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Overview_of_the_environmental_data_recorded_in_the_vicinity_of_the_TEMPO_mini_ecological_module_at_the_Grotto_hydrothermal_vent_/1021070", "title"=>"Overview of the environmental data recorded in the vicinity of the TEMPO-mini ecological module at the Grotto hydrothermal vent.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490730", "https://ndownloader.figshare.com/files/1490731", "https://ndownloader.figshare.com/files/1490732", "https://ndownloader.figshare.com/files/1490733"], "description"=>"<div><p>The NEPTUNE cabled observatory network hosts an ecological module called TEMPO-mini that focuses on hydrothermal vent ecology and time series, granting us real-time access to data originating from the deep sea. In 2011–2012, during TEMPO-mini’s first deployment on the NEPTUNE network, the module recorded high-resolution imagery, temperature, iron (Fe) and oxygen on a hydrothermal assemblage at 2186 m depth at Main Endeavour Field (North East Pacific). 23 days of continuous imagery were analysed with an hourly frequency. Community dynamics were analysed in detail for <i>Ridgeia piscesae</i> tubeworms, Polynoidae, Pycnogonida and Buccinidae, documenting faunal variations, natural change and biotic interactions in the filmed tubeworm assemblage as well as links with the local environment. Semi-diurnal and diurnal periods were identified both in fauna and environment, revealing the influence of tidal cycles. Species interactions were described and distribution patterns were indicative of possible microhabitat preference. The importance of high-resolution frequencies (<1 h) to fully comprehend rhythms in fauna and environment was emphasised, as well as the need for the development of automated or semi-automated imagery analysis tools.</p></div>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "hydrothermal", "tubeworm", "assemblage", "endeavour", "multidisciplinary", "deep-sea", "observatory"], "article_id"=>1021071, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0096924.s001", "https://dx.doi.org/10.1371/journal.pone.0096924.s002", "https://dx.doi.org/10.1371/journal.pone.0096924.s003", "https://dx.doi.org/10.1371/journal.pone.0096924.s004"], "stats"=>{"downloads"=>4, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Rhythms_and_Community_Dynamics_of_a_Hydrothermal_Tubeworm_Assemblage_at_Main_Endeavour_Field_8211_A_Multidisciplinary_Deep_Sea_Observatory_Approach_/1021071", "title"=>"Rhythms and Community Dynamics of a Hydrothermal Tubeworm Assemblage at Main Endeavour Field – A Multidisciplinary Deep-Sea Observatory Approach", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490708"], "description"=>"<p>Location (a) and lay-out (b) of the NEPTUNE cabled observatory on the northern Juan de Fuca plate. The NEPTUNE network contains multiple instrumented nodes (b). The Endeavour node connects the instrument platforms and the instruments at the Main Endeavour Field and contains the TEMPO-Mini module, which has been deployed at Grotto hydrothermal vent (c). MEF map based on <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0096924#pone.0096924-Delaney1\" target=\"_blank\">[57]</a> and V. Robigou (1995) (unpublished data).</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "lay-out", "neptune", "observatory", "tempo-mini"], "article_id"=>1021049, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g001", "stats"=>{"downloads"=>1, "page_views"=>35, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Location_and_lay_out_of_NEPTUNE_observatory_and_TEMPO_mini_study_site_/1021049", "title"=>"Location and lay-out of NEPTUNE observatory and TEMPO-mini study-site.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490711"], "description"=>"<p>TEMPO-mini <i>in situ</i>, at Grotto hydrothermal vent at 2186 m depth. Insets show the filmed assemblage as well as the deployed environmental probes. T60x were the temperature probes and CHEMINI Fe and optode sampling inlets were mounted on a tripod deployed below the filmed assemblage.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "module"], "article_id"=>1021052, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g002", "stats"=>{"downloads"=>3, "page_views"=>16, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_TEMPO_mini_module_in_situ_/1021052", "title"=>"TEMPO-mini module <i>in situ</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490712"], "description"=>"<p>Data overview for continuous imagery duration, i.e. 559∼23 days, during which video recording was programmed to be continuous. The gaps in the recordings were unusable video sequences (empty, black or unfocused). Temperature was recorded continuously (1 measurement every 30 seconds). For this period, Fe was measured once a day from October 20, 2011 onward. Oxygen was recorded continuously for the period, although it showed a steep decrease and other inexplicable patterns until day 83, rendering the data unusable (light-grey).</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "overview", "imagery"], "article_id"=>1021053, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g003", "stats"=>{"downloads"=>1, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Data_overview_for_continuous_imagery_duration_/1021053", "title"=>"Data overview for continuous imagery duration.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}
  • {"files"=>["https://ndownloader.figshare.com/files/1490714"], "description"=>"<p>Overview of environmental variables measured in the vicinity of the filmed assemblage. Recording period represented here corresponds to the imagery analysis, i.e. 2011-10-07 at 8 h to 2011-20-30 at 14 h, for (A) Temperature (B) Fe concentrations. Gaps in the data during this period were due to instrument-dependent failed recordings.</p>", "links"=>[], "tags"=>["ecology", "Community Ecology", "community structure", "ecosystems", "ecosystem functioning", "biota", "Marine ecology", "Marine biology", "Marine monitoring", "Marine technology", "Species interactions", "marine and aquatic sciences", "Marine geology", "variables", "continous", "imagery"], "article_id"=>1021055, "categories"=>["Biological Sciences", "Ecology"], "users"=>["Daphne Cuvelier", "Pierre Legendre", "Agathe Laes", "Pierre-Marie Sarradin", "Jozée Sarrazin"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0096924.g004", "stats"=>{"downloads"=>0, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Overview_of_the_environmental_variables_measured_during_the_continous_imagery_recording_/1021055", "title"=>"Overview of the environmental variables measured during the continous imagery recording.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-05-08 03:57:50"}

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Relative Metric

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