Taxonomic Reference Libraries for Environmental Barcoding: A Best Practice Example from Diatom Research
Events
Loading … Spinner

Mendeley | Further Information

{"title"=>"Taxonomic reference libraries for environmental barcoding: A best practice example from diatom research", "type"=>"journal", "authors"=>[{"first_name"=>"Jonas", "last_name"=>"Zimmermann", "scopus_author_id"=>"43562094600"}, {"first_name"=>"Nelida", "last_name"=>"Abarca", "scopus_author_id"=>"56157475300"}, {"first_name"=>"Neela", "last_name"=>"Enk", "scopus_author_id"=>"56872857300"}, {"first_name"=>"Oliver", "last_name"=>"Skibbe", "scopus_author_id"=>"6505842942"}, {"first_name"=>"Wolf Henning", "last_name"=>"Kusber", "scopus_author_id"=>"9243691200"}, {"first_name"=>"Regine", "last_name"=>"Jahn", "scopus_author_id"=>"7102002077"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"doi"=>"10.1371/journal.pone.0108793", "sgr"=>"84934757087", "issn"=>"19326203", "pui"=>"612503251", "isbn"=>"1932-6203", "pmid"=>"25265556", "scopus"=>"2-s2.0-84934757087"}, "id"=>"ba24ec57-b2bd-36d2-b9fc-d1e134c8550a", "abstract"=>"DNA barcoding uses a short fragment of a DNA sequence to identify a taxon. After obtaining the target sequence it is compared to reference sequences stored in a database to assign an organism name to it. The quality of data in the reference database is the key to the success of the analysis. In the here presented study, multiple types of data have been combined and critically examined in order to create best practice guidelines for taxonomic reference libraries for environmental barcoding. 70 unialgal diatom strains from Berlin waters have been established and cultured to obtain morphological and molecular data. The strains were sequenced for 18S V4 rDNA (the pre-Barcode for protists) as well as rbcL data, and identified by microscopy. LM and for some strains also SEM pictures were taken and physical vouchers deposited at the BGBM. 37 freshwater taxa from 15 naviculoid diatom genera were identified. Four taxa from the genera Amphora, Mayamaea, Planothidium and Stauroneis are described here as new. Names, molecular, morphological and habitat data as well as additional images of living cells are also available electronically in the AlgaTerra Information System. All reference sequences (or reference barcodes) presented here are linked to voucher specimens in order to provide a complete chain of evidence back to the formal taxonomic literature.", "link"=>"http://www.mendeley.com/research/taxonomic-reference-libraries-environmental-barcoding-best-practice-example-diatom-research", "reader_count"=>80, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>3, "Librarian"=>3, "Student > Doctoral Student"=>6, "Researcher"=>16, "Student > Ph. D. Student"=>23, "Student > Postgraduate"=>2, "Student > Master"=>13, "Student > Bachelor"=>11, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>3, "Librarian"=>3, "Student > Doctoral Student"=>6, "Researcher"=>16, "Student > Ph. D. Student"=>23, "Student > Postgraduate"=>2, "Student > Master"=>13, "Student > Bachelor"=>11, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>5, "Engineering"=>2, "Environmental Science"=>11, "Biochemistry, Genetics and Molecular Biology"=>8, "Agricultural and Biological Sciences"=>50, "Arts and Humanities"=>1, "Computer Science"=>1, "Earth and Planetary Sciences"=>2}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>2}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>2}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>50}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>8}, "Unspecified"=>{"Unspecified"=>5}, "Environmental Science"=>{"Environmental Science"=>11}, "Arts and Humanities"=>{"Arts and Humanities"=>1}}, "reader_count_by_country"=>{"United States"=>1, "Brazil"=>1, "Mexico"=>1, "United Kingdom"=>1, "Portugal"=>1, "Spain"=>3}, "group_count"=>5}

CrossRef

Scopus | Further Information

{"@_fa"=>"true", "link"=>[{"@_fa"=>"true", "@ref"=>"self", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84934757087"}, {"@_fa"=>"true", "@ref"=>"author-affiliation", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84934757087?field=author,affiliation"}, {"@_fa"=>"true", "@ref"=>"scopus", "@href"=>"https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84934757087&origin=inward"}, {"@_fa"=>"true", "@ref"=>"scopus-citedby", "@href"=>"https://www.scopus.com/inward/citedby.uri?partnerID=HzOxMe3b&scp=84934757087&origin=inward"}], "prism:url"=>"https://api.elsevier.com/content/abstract/scopus_id/84934757087", "dc:identifier"=>"SCOPUS_ID:84934757087", "eid"=>"2-s2.0-84934757087", "dc:title"=>"Taxonomic reference libraries for environmental barcoding: A best practice example from diatom research", "dc:creator"=>"Zimmermann J.", "prism:publicationName"=>"PLoS ONE", "prism:eIssn"=>"19326203", "prism:volume"=>"9", "prism:issueIdentifier"=>"9", "prism:pageRange"=>nil, "prism:coverDate"=>"2014-01-01", "prism:coverDisplayDate"=>"2014", "prism:doi"=>"10.1371/journal.pone.0108793", "citedby-count"=>"45", "affiliation"=>[{"@_fa"=>"true", "affilname"=>"Freie Universität Berlin", "affiliation-city"=>"Berlin", "affiliation-country"=>"Germany"}, {"@_fa"=>"true", "affilname"=>"Justus Liebig University Giessen", "affiliation-city"=>"Giessen", "affiliation-country"=>"Germany"}], "pubmed-id"=>"25265556", "prism:aggregationType"=>"Journal", "subtype"=>"ar", "subtypeDescription"=>"Article", "article-number"=>"e108793", "source-id"=>"10600153309", "openaccess"=>"1", "openaccessFlag"=>true}

Facebook

  • {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fplosone%2Farticle%3Fid%3D10.1371%252Fjournal.pone.0108793", "share_count"=>1, "like_count"=>0, "comment_count"=>0, "click_count"=>0, "total_count"=>1}

Counter

  • {"month"=>"9", "year"=>"2014", "pdf_views"=>"14", "xml_views"=>"7", "html_views"=>"130"}
  • {"month"=>"10", "year"=>"2014", "pdf_views"=>"42", "xml_views"=>"5", "html_views"=>"254"}
  • {"month"=>"11", "year"=>"2014", "pdf_views"=>"43", "xml_views"=>"2", "html_views"=>"256"}
  • {"month"=>"12", "year"=>"2014", "pdf_views"=>"28", "xml_views"=>"2", "html_views"=>"168"}
  • {"month"=>"1", "year"=>"2015", "pdf_views"=>"19", "xml_views"=>"1", "html_views"=>"124"}
  • {"month"=>"2", "year"=>"2015", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"77"}
  • {"month"=>"3", "year"=>"2015", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"94"}
  • {"month"=>"4", "year"=>"2015", "pdf_views"=>"7", "xml_views"=>"1", "html_views"=>"60"}
  • {"month"=>"5", "year"=>"2015", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"60"}
  • {"month"=>"6", "year"=>"2015", "pdf_views"=>"16", "xml_views"=>"0", "html_views"=>"60"}
  • {"month"=>"7", "year"=>"2015", "pdf_views"=>"16", "xml_views"=>"0", "html_views"=>"58"}
  • {"month"=>"8", "year"=>"2015", "pdf_views"=>"21", "xml_views"=>"1", "html_views"=>"48"}
  • {"month"=>"9", "year"=>"2015", "pdf_views"=>"7", "xml_views"=>"2", "html_views"=>"34"}
  • {"month"=>"10", "year"=>"2015", "pdf_views"=>"16", "xml_views"=>"0", "html_views"=>"60"}
  • {"month"=>"11", "year"=>"2015", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"48"}
  • {"month"=>"12", "year"=>"2015", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"91"}
  • {"month"=>"1", "year"=>"2016", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"2", "year"=>"2016", "pdf_views"=>"4", "xml_views"=>"0", "html_views"=>"74"}
  • {"month"=>"3", "year"=>"2016", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"4", "year"=>"2016", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"64"}
  • {"month"=>"5", "year"=>"2016", "pdf_views"=>"16", "xml_views"=>"0", "html_views"=>"33"}
  • {"month"=>"6", "year"=>"2016", "pdf_views"=>"27", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"7", "year"=>"2016", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"34"}
  • {"month"=>"8", "year"=>"2016", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"29"}
  • {"month"=>"9", "year"=>"2016", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"33"}
  • {"month"=>"10", "year"=>"2016", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"45"}
  • {"month"=>"11", "year"=>"2016", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"36"}
  • {"month"=>"12", "year"=>"2016", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"38"}
  • {"month"=>"1", "year"=>"2017", "pdf_views"=>"8", "xml_views"=>"1", "html_views"=>"28"}
  • {"month"=>"2", "year"=>"2017", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"63"}
  • {"month"=>"3", "year"=>"2017", "pdf_views"=>"16", "xml_views"=>"1", "html_views"=>"60"}
  • {"month"=>"4", "year"=>"2017", "pdf_views"=>"8", "xml_views"=>"0", "html_views"=>"40"}
  • {"month"=>"5", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"53"}
  • {"month"=>"6", "year"=>"2017", "pdf_views"=>"11", "xml_views"=>"1", "html_views"=>"59"}
  • {"month"=>"7", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"3", "html_views"=>"69"}
  • {"month"=>"8", "year"=>"2017", "pdf_views"=>"11", "xml_views"=>"1", "html_views"=>"43"}
  • {"month"=>"9", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"52"}
  • {"month"=>"10", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"47"}
  • {"month"=>"11", "year"=>"2017", "pdf_views"=>"10", "xml_views"=>"0", "html_views"=>"91"}
  • {"month"=>"12", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"2", "html_views"=>"50"}
  • {"month"=>"1", "year"=>"2018", "pdf_views"=>"13", "xml_views"=>"0", "html_views"=>"32"}
  • {"month"=>"2", "year"=>"2018", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"29"}
  • {"month"=>"3", "year"=>"2018", "pdf_views"=>"20", "xml_views"=>"1", "html_views"=>"22"}
  • {"month"=>"4", "year"=>"2018", "pdf_views"=>"4", "xml_views"=>"1", "html_views"=>"30"}
  • {"month"=>"5", "year"=>"2018", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"12"}
  • {"month"=>"6", "year"=>"2018", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"20"}
  • {"month"=>"7", "year"=>"2018", "pdf_views"=>"12", "xml_views"=>"3", "html_views"=>"28"}
  • {"month"=>"8", "year"=>"2018", "pdf_views"=>"11", "xml_views"=>"1", "html_views"=>"17"}
  • {"month"=>"9", "year"=>"2018", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"26"}
  • {"month"=>"10", "year"=>"2018", "pdf_views"=>"15", "xml_views"=>"1", "html_views"=>"16"}
  • {"month"=>"11", "year"=>"2018", "pdf_views"=>"10", "xml_views"=>"1", "html_views"=>"22"}
  • {"month"=>"12", "year"=>"2018", "pdf_views"=>"6", "xml_views"=>"0", "html_views"=>"14"}
  • {"month"=>"1", "year"=>"2019", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"18"}
  • {"month"=>"2", "year"=>"2019", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"19"}
  • {"month"=>"3", "year"=>"2019", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"28"}
  • {"month"=>"4", "year"=>"2019", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"21"}
  • {"month"=>"5", "year"=>"2019", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"13"}
  • {"month"=>"6", "year"=>"2019", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"18"}
  • {"month"=>"7", "year"=>"2019", "pdf_views"=>"6", "xml_views"=>"4", "html_views"=>"14"}
  • {"month"=>"8", "year"=>"2019", "pdf_views"=>"4", "xml_views"=>"1", "html_views"=>"12"}

Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1695223"], "description"=>"<p>Fig. 3.1. <i>Achnanthidium saprophilum</i> (H.Kobayasi & Mayama) Round & Bukht., Strain D06_036. Fig. 3.2.–3. <i>Planothidium frequentissimum</i> (Lange-Bert.) Lange-Bert., Strain D06_139. Fig. 3.4.–5. <i>Planothidium lanceolatum</i> (Bréb. ex Kütz.) Lange-Bert., Strain D06_047. Fig. 3.6. <i>Karayevia ploenensis</i> var. <i>gessneri</i> (Hust.) Bukt., Strain D03_034. Fig. 3.7. <i>Luticola sparsipunctata</i> Levkov, Metzeltin & Pavlov, Strain D06_029. Fig. 3.8. <i>Amphora pediculus</i> (Kütz.) Grunow, Strain D03_074. Fig. 3.9. <i>Amphora</i> sp. aff. <i>atomoides</i> Levkov, strain D54_002. Fig. 3.10. <i>Amphora</i> cf. <i>pediculus</i> (Kütz.) Grunow, Strain D03_082. Fig. 3.11. <i>Amphora ovalis</i> (Kütz.) Kütz., Strain Amph4. Fig. 3.12. <i>Cocconeis pediculus</i> Ehrenberg, Epitype-Strain D36_020. Fig. 3.13. <i>Cocconeis placentula</i> Ehrenberg, Epitype-Strain D36_012. Fig. 3.14. <i>Sellaphora seminulum</i> (Grunow) D.G.Mann, Strain D06_006. Fig. 3.15. <i>Eolimna minima</i> (Grunow) Lange-Bert., Strain D03_030. Fig. 3.16. <i>Sellaphora pupula</i> (Kütz.) Mereschk., Strain D06_060. Fig. 3.17.–18. <i>Mayamaea permitis</i> (Hust.) Bruder & Medlin, Strain D06_106. Fig. 3.19. <i>Caloneis amphisbaena</i> (Bory) Cleve, Strain Navi1. Fig. 3.20. <i>Navicula tripunctata</i> (O.F.Müll.) Bory, Strain D03_139. Fig. 3.21. <i>Navicula rhynchotella</i> Lange-Bert., Strain D06_093. Fig. 3.22. <i>Navicula radiosa</i> Kütz., Strain D06_102. Fig. 3.23. <i>Craticula cuspidata</i> (Kütz.) D.G.Mann, Strain Navi4. Fig. 3.24. <i>Navicula gregaria</i> Donkin, Strain D06_122. Fig. 3.25. <i>Craticula buderi</i> (Hust.) Lange-Bert., Strain D06_069. Fig. 3.26. <i>Navicula cryptocephala</i> Kütz., Strain D06_059. Fig. 3.27. <i>Navicula slesvicensis</i> Grunow, Strain D06_038. Fig. 3.28. <i>Stauroneis phoenicenteron</i> (Nitzsch) Ehrenb., Strain Stau1. Fig. 3.29. <i>Pinnularia neomajor</i> Krammer, Strain PinnB. Fig. 3.30. <i>Pinnularia</i> sp., Strain PinnC. Fig. 3.31. <i>Pinnularia viridiformis</i> Krammer, Strain Pinn2. Fig. 3.32. <i>Pinnularia viridiformis</i> Krammer, Strain ElPin01. Fig. 3.33. <i>Pinnularia</i> sp., Strain Navi2. Fig. 3.34. <i>Gomphonema saprophilum</i> (Lange-Bert. & Reichardt) N.Abarca, R.Jahn, J. Zimmermann & Enke, Strain D36_003. Scale bar represents 10 µm.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186048, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g003", "stats"=>{"downloads"=>9, "page_views"=>163, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_LM_photos_of_individual_valves_from_strains_/1186048", "title"=>"LM photos of individual valves from strains.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695240"], "description"=>"<p>All bootstrap support values given above branches.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186061, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g006", "stats"=>{"downloads"=>0, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Neighbour_Joining_Tree_10_000_bootstrap_replicates_derived_from_concatenated_dataset_18S_V4_rbc_L_including_all_sequences_from_this_study_/1186061", "title"=>"Neighbour Joining Tree (10 000 bootstrap replicates) derived from concatenated dataset (18S V4, <i>rbc</i>L) including all sequences from this study.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695260", "https://ndownloader.figshare.com/files/1695261", "https://ndownloader.figshare.com/files/1695263", "https://ndownloader.figshare.com/files/1695264"], "description"=>"<div><p>DNA barcoding uses a short fragment of a DNA sequence to identify a taxon. After obtaining the target sequence it is compared to reference sequences stored in a database to assign an organism name to it. The quality of data in the reference database is the key to the success of the analysis. In the here presented study, multiple types of data have been combined and critically examined in order to create best practice guidelines for taxonomic reference libraries for environmental barcoding. 70 unialgal diatom strains from Berlin waters have been established and cultured to obtain morphological and molecular data. The strains were sequenced for 18S V4 rDNA (the pre-Barcode for protists) as well as <i>rbc</i>L data, and identified by microscopy. LM and for some strains also SEM pictures were taken and physical vouchers deposited at the BGBM. 37 freshwater taxa from 15 naviculoid diatom genera were identified. Four taxa from the genera <i>Amphora</i>, <i>Mayamaea</i>, <i>Planothidium</i> and <i>Stauroneis</i> are described here as new. Names, molecular, morphological and habitat data as well as additional images of living cells are also available electronically in the AlgaTerra Information System. All reference sequences (or reference barcodes) presented here are linked to voucher specimens in order to provide a complete chain of evidence back to the formal taxonomic literature.</p></div>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186075, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0108793.s001", "https://dx.doi.org/10.1371/journal.pone.0108793.s002", "https://dx.doi.org/10.1371/journal.pone.0108793.s003", "https://dx.doi.org/10.1371/journal.pone.0108793.s004"], "stats"=>{"downloads"=>23, "page_views"=>19, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Taxonomic_Reference_Libraries_for_Environmental_Barcoding_A_Best_Practice_Example_from_Diatom_Research_/1186075", "title"=>"Taxonomic Reference Libraries for Environmental Barcoding: A Best Practice Example from Diatom Research", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695235"], "description"=>"<p>Figs. 4.1a–i. <i>Amphora berolinensis</i> N.Abarca & R. Jahn sp. nov., Strain HSB02; Fig. 4.1d–i. Holotype B 40 0040823. Figs. 4.2a–g. <i>Mayamaea terrestris</i> N.Abarca et R.Jahn sp. nov., Strain D29_009b; Fig. 4.2d–g. Holotype B 40 0040847. Figs. 4.3a–h. <i>Planothidium caputium</i> J.Zimmermann & R.Jahn sp. nov., Strain D06_014; Fig. 4.3e–h Holotype B 40 0040871. Fig. 4.4a–h. <i>Stauroneis schmidiae</i> R.Jahn & N.Abarca sp. nov., Strain D28_008; Fig. 4.4f–h. Holotype B 40 0040882.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186056, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g004", "stats"=>{"downloads"=>5, "page_views"=>24, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_SEM_and_LM_photos_of_the_newly_described_species_/1186056", "title"=>"SEM and LM photos of the newly described species.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695248"], "description"=>"<p>Basepair differences (bp diff.) for each taxon and strain number specified for both markers 18S V4 and <i>rbc</i>L. – denotes missing representative for taxon in INSDC databases (accessed July 2013).</p>1<p><i>Achnanthidium minutissimum</i> (Kützing) Czarnecki.</p>2<p>new name for the taxon formerly identified as <i>Amphora libyca</i> Ehrenberg.</p>3<p>as <i>Navicula minima</i>.</p><p>Sequence comparison of the here presented strains with corresponding accessions from INSDC databases.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186069, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.t003", "stats"=>{"downloads"=>2, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Sequence_comparison_of_the_here_presented_strains_with_corresponding_accessions_from_INSDC_databases_/1186069", "title"=>"Sequence comparison of the here presented strains with corresponding accessions from INSDC databases.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695247"], "description"=>"<p>INSDC accession numbers starting with KM are newly published here, those starting with FR have been published in Zimmermann et al. (2011) <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone.0108793-Zimmermann1\" target=\"_blank\">[19]</a> and numbers starting with HG in Abarca et al. (2014) <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone.0108793-Gemeinholzer1\" target=\"_blank\">[39]</a>.</p><p>* URL for AlgaTerra <a href=\"http://herbarium.bgbm.org/object/plus\" target=\"_blank\">http://herbarium.bgbm.org/object/plus</a> the corresponding B Voucher.</p><p>**pictures of all strains are available online by AlgaTerra <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone.0108793-Jahn2\" target=\"_blank\">[30]</a>.</p><p>List of materials from Berlin localities: names of 37 Taxa and 70 strains, voucher codes in the Herbarium Berolinense (B), DNA Bank voucher numbers in the Berlin-Dahlem Plant DNA Bank, INSDC accession numbers, picture numbers in this publication and morphometrics of each strain (n = number of evaluated valves).</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186068, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.t002", "stats"=>{"downloads"=>7, "page_views"=>15, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_List_of_materials_from_Berlin_localities_names_of_37_Taxa_and_70_strains_voucher_codes_in_the_Herbarium_Berolinense_B_DNA_Bank_voucher_numbers_in_the_Berlin_Dahlem_Plant_DNA_Bank_INSDC_accession_numbers_picture_numbers_in_this_publication_and_morphometri/1186068", "title"=>"List of materials from Berlin localities: names of 37 Taxa and 70 strains, voucher codes in the Herbarium Berolinense (B), DNA Bank voucher numbers in the Berlin-Dahlem Plant DNA Bank, INSDC accession numbers, picture numbers in this publication and morphometrics of each strain (n = number of evaluated valves).", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695244"], "description"=>"<p>Bootstrap support values >0.75 given at nodes. Red indicates data from new species, green information and conlusions derived from data in the AlgaTerra Information System <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone.0108793-Jahn2\" target=\"_blank\">[30]</a>.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186065, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g007", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Neighbour_Joining_Tree_10_000_bootstrap_replicates_including_all_sequences_available_from_the_INSDC_databases_for_genus_Amphora_a_18S_V4_b_rbc_L_as_well_as_Mayamaea_c_18S_V4_d_rbc_L_/1186065", "title"=>"Neighbour Joining Tree (10 000 bootstrap replicates) including all sequences available from the INSDC databases for genus <i>Amphora</i> (a) 18S V4, (b) <i>rbc</i>L as well as <i>Mayamaea</i> (c) 18S V4, (d) <i>rbc</i>L.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695237"], "description"=>"<p>Inferred from data in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone-0108793-t003\" target=\"_blank\">Table 3</a>.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186059, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g005", "stats"=>{"downloads"=>4, "page_views"=>18, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Chart_giving_classes_of_base_pair_bp_differences_for_both_markers_18S_V4_rbc_L_between_here_presented_molecular_data_and_corresponding_data_from_INSDC_databases_/1186059", "title"=>"Chart giving classes of base pair (bp) differences for both markers (18S V4, <i>rbc</i>L) between here presented molecular data and corresponding data from INSDC databases.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695216"], "description"=>"<p>Map of the sampling localities in the Berlin region. For details to the numbered sampling sites see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108793#pone-0108793-t001\" target=\"_blank\">Table 1</a>.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186041, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g002", "stats"=>{"downloads"=>2, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Map_of_the_sampling_localities_in_the_Berlin_region_For_details_to_the_numbered_sampling_sites_see_Table_1_/1186041", "title"=>"Map of the sampling localities in the Berlin region. For details to the numbered sampling sites see Table 1.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695214"], "description"=>"<p>Schematic overview of sample processing and voucher as well as data production and deposition for environmental barcoding.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186039, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g001", "stats"=>{"downloads"=>1, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Schematic_overview_of_sample_processing_and_voucher_as_well_as_data_production_and_deposition_for_environmental_barcoding_/1186039", "title"=>"Schematic overview of sample processing and voucher as well as data production and deposition for environmental barcoding.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695246"], "description"=>"<p>(Ecology: D = dimictic, P = polymictic, T = turbid, E = eutrophic, alkaline, A = acidic, all running waters are part of Elbe catchment area).</p><p>*Uncertainty = ±50 m,</p><p>** Uncertainty = ±22500 m.</p><p>List of Localities: Strain Numbers, Geo-Reference, Habitat, Ecology.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186067, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.t001", "stats"=>{"downloads"=>4, "page_views"=>17, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_List_of_Localities_Strain_Numbers_Geo_Reference_Habitat_Ecology_/1186067", "title"=>"List of Localities: Strain Numbers, Geo-Reference, Habitat, Ecology.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-29 02:58:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/1695245"], "description"=>"<p>Bootstrap support values >0.75 given at nodes. Red indicates data from new species.</p>", "links"=>[], "tags"=>["taxa", "BGBM", "taxonomic reference libraries", "voucher", "70 unialgal diatom strains", "18 S V 4 rDNA", "sem", "reference sequences", "AlgaTerra Information System", "lm", "data", "15 naviculoid diatom genera", "Diatom Research DNA barcoding"], "article_id"=>1186066, "categories"=>["Biological Sciences"], "users"=>["Jonas Zimmermann", "Nelida Abarca", "Neela Enk", "Oliver Skibbe", "Wolf-Henning Kusber", "Regine Jahn"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0108793.g008", "stats"=>{"downloads"=>0, "page_views"=>15, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Neighbour_Joining_Tree_10_000_bootstrap_replicates_including_all_sequences_available_from_the_INSDC_databases_for_genus_Planothidium_a_18S_V4_b_rbc_L_as_well_as_Stauroneis_c_18S_V4_d_rbc_L_/1186066", "title"=>"Neighbour Joining Tree (10 000 bootstrap replicates) including all sequences available from the INSDC databases for genus <i>Planothidium</i> (a) 18S V4, (b) <i>rbc</i>L as well as <i>Stauroneis</i> (c) 18S V4, (d) <i>rbc</i>L.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-29 02:58:47"}

PMC Usage Stats | Further Information

  • {"unique-ip"=>"13", "full-text"=>"15", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"4"}
  • {"unique-ip"=>"11", "full-text"=>"12", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"5"}
  • {"unique-ip"=>"12", "full-text"=>"13", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"6"}
  • {"unique-ip"=>"15", "full-text"=>"17", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"7"}
  • {"unique-ip"=>"16", "full-text"=>"18", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"3"}
  • {"unique-ip"=>"23", "full-text"=>"52", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"2"}
  • {"unique-ip"=>"16", "full-text"=>"16", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2015", "month"=>"8"}
  • {"unique-ip"=>"24", "full-text"=>"21", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"9"}
  • {"unique-ip"=>"13", "full-text"=>"13", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"10"}
  • {"unique-ip"=>"33", "full-text"=>"48", "pdf"=>"12", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"10"}
  • {"unique-ip"=>"16", "full-text"=>"19", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"29", "full-text"=>"45", "pdf"=>"14", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"11"}
  • {"unique-ip"=>"16", "full-text"=>"27", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2014", "month"=>"12"}
  • {"unique-ip"=>"17", "full-text"=>"38", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"1"}
  • {"unique-ip"=>"18", "full-text"=>"14", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"1", "cited-by"=>"2", "year"=>"2015", "month"=>"11"}
  • {"unique-ip"=>"16", "full-text"=>"10", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
  • {"unique-ip"=>"3", "full-text"=>"2", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"14", "full-text"=>"15", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"3"}
  • {"unique-ip"=>"9", "full-text"=>"8", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"4"}
  • {"unique-ip"=>"13", "full-text"=>"12", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"5"}
  • {"unique-ip"=>"15", "full-text"=>"10", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"6"}
  • {"unique-ip"=>"10", "full-text"=>"9", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
  • {"unique-ip"=>"9", "full-text"=>"9", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"8"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"9"}
  • {"unique-ip"=>"17", "full-text"=>"16", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"17", "full-text"=>"18", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"16", "full-text"=>"15", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
  • {"unique-ip"=>"15", "full-text"=>"12", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
  • {"unique-ip"=>"6", "full-text"=>"6", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"2"}
  • {"unique-ip"=>"15", "full-text"=>"16", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"7", "full-text"=>"7", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"11", "full-text"=>"12", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"10", "full-text"=>"13", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"3", "full-text"=>"3", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"9", "full-text"=>"8", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"7", "full-text"=>"7", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}
  • {"unique-ip"=>"12", "full-text"=>"19", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"6", "full-text"=>"6", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"12"}
  • {"unique-ip"=>"12", "full-text"=>"15", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
  • {"unique-ip"=>"10", "full-text"=>"10", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"3"}
  • {"unique-ip"=>"27", "full-text"=>"31", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"1"}
  • {"unique-ip"=>"10", "full-text"=>"11", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"11"}
  • {"unique-ip"=>"8", "full-text"=>"8", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"11", "full-text"=>"13", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"9"}
  • {"unique-ip"=>"8", "full-text"=>"8", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
  • {"unique-ip"=>"14", "full-text"=>"14", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"4", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
  • {"unique-ip"=>"7", "full-text"=>"4", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
  • {"unique-ip"=>"11", "full-text"=>"12", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
  • {"unique-ip"=>"9", "full-text"=>"10", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
  • {"unique-ip"=>"15", "full-text"=>"25", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
  • {"unique-ip"=>"15", "full-text"=>"19", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
  • {"unique-ip"=>"18", "full-text"=>"23", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
  • {"unique-ip"=>"17", "full-text"=>"21", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"17", "full-text"=>"23", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}

Relative Metric

{"start_date"=>"2014-01-01T00:00:00Z", "end_date"=>"2014-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Biology and life sciences/Biochemistry", "average_usage"=>[282]}, {"subject_area"=>"/Biology and life sciences/Evolutionary biology", "average_usage"=>[333]}, {"subject_area"=>"/Biology and life sciences/Genetics", "average_usage"=>[306, 482]}, {"subject_area"=>"/Biology and life sciences/Molecular biology", "average_usage"=>[292, 461]}, {"subject_area"=>"/Computer and information sciences", "average_usage"=>[327, 511]}, {"subject_area"=>"/Computer and information sciences/Data management", "average_usage"=>[365, 545]}]}
Loading … Spinner
There are currently no alerts