Spectral Diversity and Regulation of Coral Fluorescence in a Mesophotic Reef Habitat in the Red Sea
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{"title"=>"Spectral diversity and regulation of coral fluorescence in a mesophotic reef habitat in the Red Sea", "type"=>"journal", "authors"=>[{"first_name"=>"Gal", "last_name"=>"Eyal", "scopus_author_id"=>"38361355000"}, {"first_name"=>"Jörg", "last_name"=>"Wiedenmann", "scopus_author_id"=>"6603258810"}, {"first_name"=>"Mila", "last_name"=>"Grinblat", "scopus_author_id"=>"56780032700"}, {"first_name"=>"Cecilia", "last_name"=>"D'Angelo", "scopus_author_id"=>"7004426194"}, {"first_name"=>"Esti", "last_name"=>"Kramarsky-Winter", "scopus_author_id"=>"6603199079"}, {"first_name"=>"Tali", "last_name"=>"Treibitz", "scopus_author_id"=>"15623841900"}, {"first_name"=>"Or", "last_name"=>"Ben-Zvi", "scopus_author_id"=>"56431118600"}, {"first_name"=>"Yonathan", "last_name"=>"Shaked", "scopus_author_id"=>"57201224631"}, {"first_name"=>"Tyler B.", "last_name"=>"Smith", "scopus_author_id"=>"13606962900"}, {"first_name"=>"Saki", "last_name"=>"Harii", "scopus_author_id"=>"6508150500"}, {"first_name"=>"Vianney", "last_name"=>"Denis", "scopus_author_id"=>"17434060100"}, {"first_name"=>"Tim", "last_name"=>"Noyes", "scopus_author_id"=>"55344654200"}, {"first_name"=>"Raz", "last_name"=>"Tamir", "scopus_author_id"=>"56779857200"}, {"first_name"=>"Yossi", "last_name"=>"Loya", "scopus_author_id"=>"7005767863"}], "year"=>2015, "source"=>"PLoS ONE", "identifiers"=>{"scopus"=>"2-s2.0-84939202817", "sgr"=>"84939202817", "issn"=>"19326203", "doi"=>"10.1371/journal.pone.0128697", "pmid"=>"26107282", "isbn"=>"10.1371/journal.pone.0128697", "pui"=>"605586411"}, "id"=>"66cfcb24-3dea-3a74-b3eb-739573602703", "abstract"=>"The phenomenon of coral fluorescence in mesophotic reefs, although well described for shallow waters, remains largely unstudied. We found that representatives of many scleractinian species are brightly fluorescent at depths of 50-60 m at the Interuniversity Institute for Marine Sciences (IUI) reef in Eilat, Israel. Some of these fluorescent species have distribution maxima at mesophotic depths (40-100 m). Several individuals from these depths displayed yellow or orange-red fluorescence, the latter being essentially absent in corals from the shallowest parts of this reef. We demonstrate experimentally that in some cases the production of fluorescent pigments is independent of the exposure to light; while in others, the fluorescence signature is altered or lost when the animals are kept in darkness. Furthermore, we show that green-to-red photoconversion of fluorescent pigments mediated by short-wavelength light can occur also at depths where ultraviolet wavelengths are absent from the underwater light field. Intraspecific colour polymorphisms regarding the colour of the tissue fluorescence, common among shallow water corals, were also observed for mesophotic species. Our results suggest that fluorescent pigments in mesophotic reefs fulfil a distinct biological function and offer promising application potential for coral-reef monitoring and biomedical imaging.", "link"=>"http://www.mendeley.com/research/spectral-diversity-regulation-coral-fluorescence-mesophotic-reef-habitat-red-sea", "reader_count"=>69, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>2, "Researcher"=>16, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>15, "Student > Postgraduate"=>2, "Other"=>3, "Student > Master"=>16, "Student > Bachelor"=>7, "Lecturer > Senior Lecturer"=>2, "Professor"=>1, "Unspecified"=>1, "Lecturer"=>1}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>2, "Researcher"=>16, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>15, "Student > Postgraduate"=>2, "Other"=>3, "Student > Master"=>16, "Student > Bachelor"=>7, "Lecturer > Senior Lecturer"=>2, "Professor"=>1, "Unspecified"=>1, "Lecturer"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>5, "Engineering"=>1, "Environmental Science"=>11, "Biochemistry, Genetics and Molecular Biology"=>3, "Materials Science"=>1, "Agricultural and Biological Sciences"=>40, "Chemistry"=>4, "Earth and Planetary Sciences"=>4}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>1}, "Materials Science"=>{"Materials Science"=>1}, "Chemistry"=>{"Chemistry"=>4}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>4}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>40}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>3}, "Unspecified"=>{"Unspecified"=>5}, "Environmental Science"=>{"Environmental Science"=>11}}, "reader_count_by_country"=>{"Republic of Singapore"=>1, "South Africa"=>1, "United Kingdom"=>1, "Germany"=>2}, "group_count"=>1}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/2147698"], "description"=>"<p>Photographs show the appearance of representative specimens under daylight (left column) or imaged under blue light through a yellow long-pass filter (Nightsea) (middle column). Fluorescence spectra (right column) were recorded after excitation with 450 nm light. Peak positions are indicated by arrows. (a) <i>Oxypora egyptensis</i>, (b) <i>Alveopora ocellata</i>, (c) <i>Goniopora minor</i>, (d) <i>Pleuractis granulosa</i> and (e) <i>Echinophyllia aspera</i>.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462829, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g003", "stats"=>{"downloads"=>0, "page_views"=>16, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Fluorescence_signature_of_corals_collected_from_mesophotic_depths_in_the_Gulf_of_Eilat_Aqaba_/1462829", "title"=>"Fluorescence signature of corals collected from mesophotic depths in the Gulf of Eilat/Aqaba.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147693"], "description"=>"<p>(a) Percentage of PAR at various depths expressed as % of surface PAR (1400 μmol*m<sup>-2</sup>*s<sup>-1</sup>). The inset shows the values for mesophotic depths. (b) Depth-dependent changes in spectral irradiance.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462824, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g001", "stats"=>{"downloads"=>5, "page_views"=>18, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Changes_in_downwelling_photosynthetic_active_radiation_PAR_and_spectral_composition_of_the_underwater_light_in_different_depths_in_the_Gulf_of_Aqaba_off_the_Interuniversity_Institute_in_Eilat_on_the_29_th_October_2015_/1462824", "title"=>"Changes in downwelling photosynthetic active radiation (PAR) and spectral composition of the underwater light in different depths in the Gulf of Aqaba off the Interuniversity Institute in Eilat on the 29<sup>th</sup> October 2015.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147706"], "description"=>"<p>(a) The daylight appearance (upper panel) and blue-light-induced fluorescence (lower panel) were imaged after 6 months of culture under low intensity, full spectrum white light (violet light [+]) or cyan light (~480 nm, violet light [-]). (b) Fluorescence emission per area upon excitation with 420 nm light was quantified for violet light [+] and violet light [–] treated corals. Spectra represent the means of 10 individual measurements taken from 3 different replicate colonies exposed to the corresponding light environments. Peak positions are indicated by arrows. (c) A violet light [–] treated specimen was photographed with a Leica digital video camera attached to an Olympus fluorescence stereomicroscope using a GFP filter set before (upper image) and after (lower image) exposure of the region of interest (ROI) to focused 380 nm light.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462837, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g007", "stats"=>{"downloads"=>1, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Changes_in_the_tissue_fluorescence_of_Echinophyllia_sp_in_response_to_experimentally_altered_light_environments_/1462837", "title"=>"Changes in the tissue fluorescence of <i>Echinophyllia</i> sp. in response to experimentally-altered light environments.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147705"], "description"=>"<p>Images, taken after the specimens were collected, show the daylight appearance (left column) and the blue-light-induced fluorescence of the upper and underside of the branches (middle/right column).</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462836, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g006", "stats"=>{"downloads"=>2, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Fluorescence_of_S_pistillata_and_A_squarrosa_from_depths_60_m_/1462836", "title"=>"Fluorescence of <i>S. pistillata</i> and <i>A. squarrosa</i> from depths ≥60 m.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147700"], "description"=>"<p>Representative colonies of the (a) green, (b) yellow and (c) red colour morphs were imaged <i>in situ</i> at 50–60 m depth by flashlight photography (left column). Their fluorescence, excited by the natural, down-welling blue-dominated light during daytime was bright enough to be photographed using a yellow long-pass barrier filter (Nightsea) (middle column). Fluorescence emission spectra were recorded under blue light excitation (450 nm) after transfer of the corals to the laboratory (right column). Peak positions are indicated by arrows.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462831, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g004", "stats"=>{"downloads"=>0, "page_views"=>11, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Colour_polymorphism_of_Goniopora_somaliensis_/1462831", "title"=>"Colour polymorphism of <i>Goniopora somaliensis</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147695"], "description"=>"<p>(a) Green fluorescence of <i>Euphyllia paradivisia</i> and (b) Orange-red fluorescence of <i>Dipsastraea favus</i> photographed under excitation by the blue-dominated natural light at depths of ~60 m. (c) Fluorescence imaging system photography showing the orange-red fluorescence emission of <i>Echinophyllia aspera</i> and the green fluorescence of <i>Alveopora ocellata</i> at ~53 m prior to collection for laboratory analyses.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462826, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g002", "stats"=>{"downloads"=>0, "page_views"=>9, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_In_situ_survey_of_fluorescence_in_mesophotic_corals_/1462826", "title"=>"<i>In-situ</i> survey of fluorescence in mesophotic corals.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147707"], "description"=>"<p>The dominant emission peaks are indicated in bold numbers.</p><p><sup>a</sup> This study</p><p><sup>b</sup> WoRMS Editorial Board (2015). World Register of Marine Species. Available from <a href=\"http://www.marinespecies.org/\" target=\"_blank\">http://www.marinespecies.org</a> at VLIZ</p><p><sup>c</sup> Eyal et al, unpublished</p><p><sup>d</sup> [<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0128697#pone.0128697.ref045\" target=\"_blank\">45</a>]</p><p><sup>e</sup> [<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0128697#pone.0128697.ref046\" target=\"_blank\">46</a>]</p><p><sup>f</sup> [<a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0128697#pone.0128697.ref047\" target=\"_blank\">47</a>]</p><p>Fluorescence emission maxima of corals and corallimorpharians from Eilat reefs.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462838, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.t001", "stats"=>{"downloads"=>3, "page_views"=>18, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Fluorescence_emission_maxima_of_corals_and_corallimorpharians_from_Eilat_reefs_/1462838", "title"=>"Fluorescence emission maxima of corals and corallimorpharians from Eilat reefs.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2015-06-24 04:19:44"}
  • {"files"=>["https://ndownloader.figshare.com/files/2147703"], "description"=>"<p>The daylight appearance and blue-light- induced fluorescence of the green (a), red (b) and yellow (c) colour morphs are imaged after one year of culture under low intensity daylight (upper row) and in complete darkness (lower row). Fluorescence emission spectra in the range of GFP-like proteins (450–650 nm) and chlorophyll (650–800 nm), measured by excitation with ~450 nm, are shown for the displayed individuals. Peak positions are indicated by arrows.</p>", "links"=>[], "tags"=>["Mesophotic Reef Habitat", "mesophotic species", "Coral Fluorescence", "pigment", "mesophotic reefs fulfil", "tissue fluorescence", "iui", "light field", "Several individuals", "Spectral Diversity", "mesophotic reefs", "fluorescence signature", "water corals", "Intraspecific colour polymorphisms", "distribution maxima", "shallowest parts", "Interuniversity Institute", "scleractinian species", "Marine Sciences", "depth", "Red Sea"], "article_id"=>1462834, "categories"=>["Uncategorised"], "users"=>["Gal Eyal", "Jörg Wiedenmann", "Mila Grinblat", "Cecilia D’Angelo", "Esti Kramarsky-Winter", "Tali Treibitz", "Or Ben-Zvi", "Yonathan Shaked", "Tyler B. Smith", "Saki Harii", "Vianney Denis", "Tim Noyes", "Raz Tamir", "Yossi Loya"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0128697.g005", "stats"=>{"downloads"=>2, "page_views"=>17, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Changes_in_fluorescence_of_colour_morphs_of_Euphyllia_paradivisa_from_mesophotic_depths_in_response_to_altered_light_environments_/1462834", "title"=>"Changes in fluorescence of colour morphs of <i>Euphyllia paradivisa</i> from mesophotic depths in response to altered light environments.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-06-24 04:19:44"}

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Relative Metric

{"start_date"=>"2015-01-01T00:00:00Z", "end_date"=>"2015-12-31T00:00:00Z", "subject_areas"=>[]}
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