Fine Dissection of Human Mitochondrial DNA Haplogroup HV Lineages Reveals Paleolithic Signatures from European Glacial Refugia
Events
Loading … Spinner

Mendeley | Further Information

{"title"=>"Fine dissection of human mitochondrial DNA haplogroup HV lineages reveals paleolithic signatures from European Glacial refugia", "type"=>"journal", "authors"=>[{"first_name"=>"Sara", "last_name"=>"De Fanti", "scopus_author_id"=>"55348928900"}, {"first_name"=>"Chiara", "last_name"=>"Barbieri", "scopus_author_id"=>"36674501900"}, {"first_name"=>"Stefania", "last_name"=>"Sarno", "scopus_author_id"=>"56396431700"}, {"first_name"=>"Federica", "last_name"=>"Sevini", "scopus_author_id"=>"13806203300"}, {"first_name"=>"Dario", "last_name"=>"Vianello", "scopus_author_id"=>"55661060300"}, {"first_name"=>"Erika", "last_name"=>"Tamm", "scopus_author_id"=>"24451285300"}, {"first_name"=>"Ene", "last_name"=>"Metspalu", "scopus_author_id"=>"6603276067"}, {"first_name"=>"Mannis", "last_name"=>"Van Oven", "scopus_author_id"=>"24402318200"}, {"first_name"=>"Alexander", "last_name"=>"Hübner", "scopus_author_id"=>"57076112600"}, {"first_name"=>"Marco", "last_name"=>"Sazzini", "scopus_author_id"=>"25961159000"}, {"first_name"=>"Claudio", "last_name"=>"Franceschi", "scopus_author_id"=>"56236886700"}, {"first_name"=>"Davide", "last_name"=>"Pettener", "scopus_author_id"=>"6701660397"}, {"first_name"=>"Donata", "last_name"=>"Luiselli", "scopus_author_id"=>"6602928572"}], "year"=>2015, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "pui"=>"607909975", "doi"=>"10.1371/journal.pone.0144391", "sgr"=>"84955480667", "isbn"=>"1932-6203", "pmid"=>"26640946", "scopus"=>"2-s2.0-84955480667"}, "id"=>"46c76af0-58da-3cdd-8eda-79c7c3c94caa", "abstract"=>"Genetic signatures from the Paleolithic inhabitants of Eurasia can be traced from the early divergent mitochondrial DNA lineages still present in contemporary human populations. Previous studies already suggested a pre-Neolithic diffusion of mitochondrial haplogroup HV*(xH,V) lineages, a relatively rare class of mtDNA types that includes parallel branches mainly distributed across Europe and West Asia with a certain degree of structure. Up till now, variation within haplogroup HV was addressed mainly by analyzing sequence data from the mtDNA control region, except for specific sub-branches, such as HV4 or the widely distributed haplogroups H and V. In this study, we present a revised HV topology based on full mtDNA genome data, and we include a comprehensive dataset consisting of 316 complete mtDNA sequences including 60 new samples from the Italian peninsula, a previously underrepresented geographic area. We highlight points of instability in the particular topology of this haplogroup, reconstructed with BEAST-generated trees and networks. We also confirm a major lineage expansion that probably followed the Late Glacial Maximum and preceded Neolithic population movements. We finally observe that Italy harbors a reservoir of mtDNA diversity, with deep-rooting HV lineages often related to sequences present in the Caucasus and the Middle East. The resulting hypothesis of a glacial refugium in Southern Italy has implications for the understanding of late Paleolithic population movements and is discussed within the archaeological cultural shifts occurred over the entire continent.", "link"=>"http://www.mendeley.com/research/fine-dissection-human-mitochondrial-dna-haplogroup-hv-lineages-reveals-paleolithic-signatures-europe", "reader_count"=>37, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>3, "Researcher"=>5, "Student > Ph. D. Student"=>11, "Student > Master"=>5, "Student > Bachelor"=>5, "Lecturer"=>2, "Lecturer > Senior Lecturer"=>1, "Professor"=>4}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>3, "Researcher"=>5, "Student > Ph. D. Student"=>11, "Student > Master"=>5, "Student > Bachelor"=>5, "Lecturer"=>2, "Lecturer > Senior Lecturer"=>1, "Professor"=>4}, "reader_count_by_subject_area"=>{"Unspecified"=>2, "Environmental Science"=>1, "Biochemistry, Genetics and Molecular Biology"=>9, "Agricultural and Biological Sciences"=>12, "Medicine and Dentistry"=>2, "Arts and Humanities"=>6, "Social Sciences"=>2, "Computer Science"=>1, "Economics, Econometrics and Finance"=>1, "Linguistics"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>2}, "Social Sciences"=>{"Social Sciences"=>2}, "Economics, Econometrics and Finance"=>{"Economics, Econometrics and Finance"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>12}, "Computer Science"=>{"Computer Science"=>1}, "Linguistics"=>{"Linguistics"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>9}, "Unspecified"=>{"Unspecified"=>2}, "Environmental Science"=>{"Environmental Science"=>1}, "Arts and Humanities"=>{"Arts and Humanities"=>6}}, "reader_count_by_country"=>{"Brazil"=>1}, "group_count"=>0}

Scopus | Further Information

{"@_fa"=>"true", "link"=>[{"@_fa"=>"true", "@ref"=>"self", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84955480667"}, {"@_fa"=>"true", "@ref"=>"author-affiliation", "@href"=>"https://api.elsevier.com/content/abstract/scopus_id/84955480667?field=author,affiliation"}, {"@_fa"=>"true", "@ref"=>"scopus", "@href"=>"https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84955480667&origin=inward"}, {"@_fa"=>"true", "@ref"=>"scopus-citedby", "@href"=>"https://www.scopus.com/inward/citedby.uri?partnerID=HzOxMe3b&scp=84955480667&origin=inward"}], "prism:url"=>"https://api.elsevier.com/content/abstract/scopus_id/84955480667", "dc:identifier"=>"SCOPUS_ID:84955480667", "eid"=>"2-s2.0-84955480667", "dc:title"=>"Fine dissection of human mitochondrial DNA haplogroup HV lineages reveals paleolithic signatures from European Glacial refugia", "dc:creator"=>"De Fanti S.", "prism:publicationName"=>"PLoS ONE", "prism:eIssn"=>"19326203", "prism:volume"=>"10", "prism:issueIdentifier"=>"12", "prism:pageRange"=>nil, "prism:coverDate"=>"2015-12-01", "prism:coverDisplayDate"=>"1 December 2015", "prism:doi"=>"10.1371/journal.pone.0144391", "citedby-count"=>"12", "affiliation"=>[{"@_fa"=>"true", "affilname"=>"Alma Mater Studiorum Università di Bologna", "affiliation-city"=>"Bologna", "affiliation-country"=>"Italy"}], "pubmed-id"=>"26640946", "prism:aggregationType"=>"Journal", "subtype"=>"ar", "subtypeDescription"=>"Article", "article-number"=>"e0144391", "source-id"=>"10600153309", "openaccess"=>"1", "openaccessFlag"=>true}

Facebook

  • {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fplosone%2Farticle%3Fid%3D10.1371%252Fjournal.pone.0144391", "share_count"=>15, "like_count"=>12, "comment_count"=>22, "click_count"=>0, "total_count"=>49}

Counter

  • {"month"=>"12", "year"=>"2015", "pdf_views"=>"132", "xml_views"=>"11", "html_views"=>"1114"}
  • {"month"=>"1", "year"=>"2016", "pdf_views"=>"39", "xml_views"=>"0", "html_views"=>"255"}
  • {"month"=>"2", "year"=>"2016", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"166"}
  • {"month"=>"3", "year"=>"2016", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"142"}
  • {"month"=>"4", "year"=>"2016", "pdf_views"=>"27", "xml_views"=>"0", "html_views"=>"232"}
  • {"month"=>"5", "year"=>"2016", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"221"}
  • {"month"=>"6", "year"=>"2016", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"182"}
  • {"month"=>"7", "year"=>"2016", "pdf_views"=>"24", "xml_views"=>"0", "html_views"=>"149"}
  • {"month"=>"8", "year"=>"2016", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"102"}
  • {"month"=>"9", "year"=>"2016", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"134"}
  • {"month"=>"10", "year"=>"2016", "pdf_views"=>"18", "xml_views"=>"0", "html_views"=>"116"}
  • {"month"=>"11", "year"=>"2016", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"112"}
  • {"month"=>"12", "year"=>"2016", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"150"}
  • {"month"=>"1", "year"=>"2017", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"145"}
  • {"month"=>"2", "year"=>"2017", "pdf_views"=>"13", "xml_views"=>"2", "html_views"=>"224"}
  • {"month"=>"3", "year"=>"2017", "pdf_views"=>"10", "xml_views"=>"0", "html_views"=>"348"}
  • {"month"=>"4", "year"=>"2017", "pdf_views"=>"11", "xml_views"=>"3", "html_views"=>"329"}
  • {"month"=>"5", "year"=>"2017", "pdf_views"=>"9", "xml_views"=>"1", "html_views"=>"336"}
  • {"month"=>"6", "year"=>"2017", "pdf_views"=>"7", "xml_views"=>"0", "html_views"=>"415"}
  • {"month"=>"7", "year"=>"2017", "pdf_views"=>"12", "xml_views"=>"1", "html_views"=>"322"}
  • {"month"=>"8", "year"=>"2017", "pdf_views"=>"6", "xml_views"=>"1", "html_views"=>"247"}
  • {"month"=>"9", "year"=>"2017", "pdf_views"=>"15", "xml_views"=>"1", "html_views"=>"271"}
  • {"month"=>"10", "year"=>"2017", "pdf_views"=>"25", "xml_views"=>"0", "html_views"=>"252"}
  • {"month"=>"11", "year"=>"2017", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"336"}
  • {"month"=>"12", "year"=>"2017", "pdf_views"=>"17", "xml_views"=>"1", "html_views"=>"284"}
  • {"month"=>"1", "year"=>"2018", "pdf_views"=>"29", "xml_views"=>"0", "html_views"=>"245"}
  • {"month"=>"2", "year"=>"2018", "pdf_views"=>"5", "xml_views"=>"0", "html_views"=>"149"}
  • {"month"=>"3", "year"=>"2018", "pdf_views"=>"25", "xml_views"=>"1", "html_views"=>"158"}
  • {"month"=>"4", "year"=>"2018", "pdf_views"=>"14", "xml_views"=>"1", "html_views"=>"136"}
  • {"month"=>"5", "year"=>"2018", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"98"}
  • {"month"=>"6", "year"=>"2018", "pdf_views"=>"14", "xml_views"=>"3", "html_views"=>"92"}
  • {"month"=>"7", "year"=>"2018", "pdf_views"=>"15", "xml_views"=>"4", "html_views"=>"121"}
  • {"month"=>"8", "year"=>"2018", "pdf_views"=>"22", "xml_views"=>"1", "html_views"=>"120"}
  • {"month"=>"9", "year"=>"2018", "pdf_views"=>"20", "xml_views"=>"1", "html_views"=>"100"}
  • {"month"=>"10", "year"=>"2018", "pdf_views"=>"17", "xml_views"=>"1", "html_views"=>"90"}
  • {"month"=>"11", "year"=>"2018", "pdf_views"=>"32", "xml_views"=>"1", "html_views"=>"115"}
  • {"month"=>"12", "year"=>"2018", "pdf_views"=>"12", "xml_views"=>"0", "html_views"=>"75"}
  • {"month"=>"1", "year"=>"2019", "pdf_views"=>"14", "xml_views"=>"0", "html_views"=>"92"}
  • {"month"=>"2", "year"=>"2019", "pdf_views"=>"17", "xml_views"=>"0", "html_views"=>"89"}
  • {"month"=>"3", "year"=>"2019", "pdf_views"=>"14", "xml_views"=>"0", "html_views"=>"72"}
  • {"month"=>"4", "year"=>"2019", "pdf_views"=>"15", "xml_views"=>"0", "html_views"=>"46"}
  • {"month"=>"5", "year"=>"2019", "pdf_views"=>"9", "xml_views"=>"0", "html_views"=>"126"}
  • {"month"=>"6", "year"=>"2019", "pdf_views"=>"11", "xml_views"=>"0", "html_views"=>"71"}
  • {"month"=>"7", "year"=>"2019", "pdf_views"=>"5", "xml_views"=>"1", "html_views"=>"77"}

Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/4302430"], "description"=>"<p>Mutations weighted proportionally to their frequency in the phylogeny.</p>", "links"=>[], "tags"=>["Fine Dissection", "Middle East", "European Glacial Refugia Genetic signatures", "Previous studies", "Human Mitochondrial DNA Haplogroup HV Lineages", "Southern Italy", "mtDNA diversity", "haplogroups H", "mitochondrial DNA lineages", "Paleolithic Signatures", "mtDNA types", "Paleolithic population movements", "Glacial Maximum", "mtDNA sequences", "sequence data", "mtDNA genome data", "HV topology", "lineage expansion", "Neolithic population movements", "West Asia", "Italy harbors", "HV 4", "Paleolithic inhabitants", "haplogroup HV", "mtDNA control region", "Italian peninsula"], "article_id"=>2648128, "categories"=>["Genetics", "Evolutionary Biology", "Environmental Sciences not elsewhere classified", "Ecology", "Biological Sciences not elsewhere classified"], "users"=>["Sara De Fanti", "Chiara Barbieri", "Stefania Sarno", "Federica Sevini", "Dario Vianello", "Erika Tamm", "Ene Metspalu", "Mannis van Oven", "Alexander Hübner", "Marco Sazzini", "Claudio Franceschi", "Davide Pettener", "Donata Luiselli"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0144391.g003", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Median_Joining_network_of_HV4_lineages_/2648128", "title"=>"Median Joining network of HV4 lineages.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-12-07 08:11:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/4302424"], "description"=>"<p><b>(A)</b> Schematic tree of the HV phylogeny, with important branches highlighted. Major nodes HV0, HV1, HV-72, HV4 and HV-16311 are marked with different colors. Mutations defining major clades are indicated, as well as mutations recurrent in the dataset, in dark red font. HV* and other lineages with an asterisk indicate positions of the tree for which we find potentially new lineages with our Italian data. The problematic position of HV9c is highlighted. (<b>B)</b> TMRCAs for major nodes and for the whole HV tree calculated by BEAST on the single lineages, on the whole dataset with imposing monophyly on major branches, and by mtPhyl. Confidence Intervals (of HPD intervals from BEAST runs) are visualized by error bars. (<b>C)</b> Probability estimates of the root height (TMRCA) calculated by BEAST on the imposed monophyly dataset.</p>", "links"=>[], "tags"=>["Fine Dissection", "Middle East", "European Glacial Refugia Genetic signatures", "Previous studies", "Human Mitochondrial DNA Haplogroup HV Lineages", "Southern Italy", "mtDNA diversity", "haplogroups H", "mitochondrial DNA lineages", "Paleolithic Signatures", "mtDNA types", "Paleolithic population movements", "Glacial Maximum", "mtDNA sequences", "sequence data", "mtDNA genome data", "HV topology", "lineage expansion", "Neolithic population movements", "West Asia", "Italy harbors", "HV 4", "Paleolithic inhabitants", "haplogroup HV", "mtDNA control region", "Italian peninsula"], "article_id"=>2648122, "categories"=>["Genetics", "Evolutionary Biology", "Environmental Sciences not elsewhere classified", "Ecology", "Biological Sciences not elsewhere classified"], "users"=>["Sara De Fanti", "Chiara Barbieri", "Stefania Sarno", "Federica Sevini", "Dario Vianello", "Erika Tamm", "Ene Metspalu", "Mannis van Oven", "Alexander Hübner", "Marco Sazzini", "Claudio Franceschi", "Davide Pettener", "Donata Luiselli"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0144391.g001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/HV_phylogeny_and_dates_/2648122", "title"=>"HV phylogeny and dates.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-12-07 08:11:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/4302355", "https://ndownloader.figshare.com/files/4302418", "https://ndownloader.figshare.com/files/4302415", "https://ndownloader.figshare.com/files/4302409", "https://ndownloader.figshare.com/files/4302403", "https://ndownloader.figshare.com/files/4302400", "https://ndownloader.figshare.com/files/4302394", "https://ndownloader.figshare.com/files/4302391", "https://ndownloader.figshare.com/files/4302388", "https://ndownloader.figshare.com/files/4302385", "https://ndownloader.figshare.com/files/4302382", "https://ndownloader.figshare.com/files/4302379", "https://ndownloader.figshare.com/files/4302376", "https://ndownloader.figshare.com/files/4302373", "https://ndownloader.figshare.com/files/4302370", "https://ndownloader.figshare.com/files/4302367", "https://ndownloader.figshare.com/files/4302364", "https://ndownloader.figshare.com/files/4302358", "https://ndownloader.figshare.com/files/4302421"], "description"=>"<div><p>Genetic signatures from the Paleolithic inhabitants of Eurasia can be traced from the early divergent mitochondrial DNA lineages still present in contemporary human populations. Previous studies already suggested a pre-Neolithic diffusion of mitochondrial haplogroup HV*(xH,V) lineages, a relatively rare class of mtDNA types that includes parallel branches mainly distributed across Europe and West Asia with a certain degree of structure. Up till now, variation within haplogroup HV was addressed mainly by analyzing sequence data from the mtDNA control region, except for specific sub-branches, such as HV4 or the widely distributed haplogroups H and V. In this study, we present a revised HV topology based on full mtDNA genome data, and we include a comprehensive dataset consisting of 316 complete mtDNA sequences including 60 new samples from the Italian peninsula, a previously underrepresented geographic area. We highlight points of instability in the particular topology of this haplogroup, reconstructed with BEAST-generated trees and networks. We also confirm a major lineage expansion that probably followed the Late Glacial Maximum and preceded Neolithic population movements. We finally observe that Italy harbors a reservoir of mtDNA diversity, with deep-rooting HV lineages often related to sequences present in the Caucasus and the Middle East. The resulting hypothesis of a glacial refugium in Southern Italy has implications for the understanding of late Paleolithic population movements and is discussed within the archaeological cultural shifts occurred over the entire continent.</p></div>", "links"=>[], "tags"=>["Fine Dissection", "Middle East", "European Glacial Refugia Genetic signatures", "Previous studies", "Human Mitochondrial DNA Haplogroup HV Lineages", "Southern Italy", "mtDNA diversity", "haplogroups H", "mitochondrial DNA lineages", "Paleolithic Signatures", "mtDNA types", "Paleolithic population movements", "Glacial Maximum", "mtDNA sequences", "sequence data", "mtDNA genome data", "HV topology", "lineage expansion", "Neolithic population movements", "West Asia", "Italy harbors", "HV 4", "Paleolithic inhabitants", "haplogroup HV", "mtDNA control region", "Italian peninsula"], "article_id"=>2648107, "categories"=>["Genetics", "Evolutionary Biology", "Environmental Sciences not elsewhere classified", "Ecology", "Biological Sciences not elsewhere classified"], "users"=>["Sara De Fanti", "Chiara Barbieri", "Stefania Sarno", "Federica Sevini", "Dario Vianello", "Erika Tamm", "Ene Metspalu", "Mannis van Oven", "Alexander Hübner", "Marco Sazzini", "Claudio Franceschi", "Davide Pettener", "Donata Luiselli"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0144391.s001", "https://dx.doi.org/10.1371/journal.pone.0144391.s018", "https://dx.doi.org/10.1371/journal.pone.0144391.s017", "https://dx.doi.org/10.1371/journal.pone.0144391.s016", "https://dx.doi.org/10.1371/journal.pone.0144391.s015", "https://dx.doi.org/10.1371/journal.pone.0144391.s014", "https://dx.doi.org/10.1371/journal.pone.0144391.s013", "https://dx.doi.org/10.1371/journal.pone.0144391.s012", "https://dx.doi.org/10.1371/journal.pone.0144391.s011", "https://dx.doi.org/10.1371/journal.pone.0144391.s010", "https://dx.doi.org/10.1371/journal.pone.0144391.s009", "https://dx.doi.org/10.1371/journal.pone.0144391.s008", "https://dx.doi.org/10.1371/journal.pone.0144391.s007", "https://dx.doi.org/10.1371/journal.pone.0144391.s006", "https://dx.doi.org/10.1371/journal.pone.0144391.s005", "https://dx.doi.org/10.1371/journal.pone.0144391.s004", "https://dx.doi.org/10.1371/journal.pone.0144391.s003", "https://dx.doi.org/10.1371/journal.pone.0144391.s002", "https://dx.doi.org/10.1371/journal.pone.0144391.s019"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Fine_Dissection_of_Human_Mitochondrial_DNA_Haplogroup_HV_Lineages_Reveals_Paleolithic_Signatures_from_European_Glacial_Refugia/2648107", "title"=>"Fine Dissection of Human Mitochondrial DNA Haplogroup HV Lineages Reveals Paleolithic Signatures from European Glacial Refugia", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2015-12-07 08:11:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/4302433"], "description"=>"<p>Bayesian Skyline plot of the whole HV dataset, with the coding region only and with the full molecule (see legend).</p>", "links"=>[], "tags"=>["Fine Dissection", "Middle East", "European Glacial Refugia Genetic signatures", "Previous studies", "Human Mitochondrial DNA Haplogroup HV Lineages", "Southern Italy", "mtDNA diversity", "haplogroups H", "mitochondrial DNA lineages", "Paleolithic Signatures", "mtDNA types", "Paleolithic population movements", "Glacial Maximum", "mtDNA sequences", "sequence data", "mtDNA genome data", "HV topology", "lineage expansion", "Neolithic population movements", "West Asia", "Italy harbors", "HV 4", "Paleolithic inhabitants", "haplogroup HV", "mtDNA control region", "Italian peninsula"], "article_id"=>2648131, "categories"=>["Genetics", "Evolutionary Biology", "Environmental Sciences not elsewhere classified", "Ecology", "Biological Sciences not elsewhere classified"], "users"=>["Sara De Fanti", "Chiara Barbieri", "Stefania Sarno", "Federica Sevini", "Dario Vianello", "Erika Tamm", "Ene Metspalu", "Mannis van Oven", "Alexander Hübner", "Marco Sazzini", "Claudio Franceschi", "Davide Pettener", "Donata Luiselli"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0144391.g004", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Bayesian_Skyline_plot_of_the_whole_HV_dataset_with_the_coding_region_only_and_with_the_full_molecule_see_legend_/2648131", "title"=>"Bayesian Skyline plot of the whole HV dataset, with the coding region only and with the full molecule (see legend).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-12-07 08:11:39"}
  • {"files"=>["https://ndownloader.figshare.com/files/4302427"], "description"=>"<p>(A) presence of haplogroup HV*(xH,V); (B) presence of major lineages HV0, HV1, HV-73(HV2), HV4, HV-16311. Gray dots indicate sampled sites. The size of the square is proportional to the number of HV individuals in each site (see legend).</p>", "links"=>[], "tags"=>["Fine Dissection", "Middle East", "European Glacial Refugia Genetic signatures", "Previous studies", "Human Mitochondrial DNA Haplogroup HV Lineages", "Southern Italy", "mtDNA diversity", "haplogroups H", "mitochondrial DNA lineages", "Paleolithic Signatures", "mtDNA types", "Paleolithic population movements", "Glacial Maximum", "mtDNA sequences", "sequence data", "mtDNA genome data", "HV topology", "lineage expansion", "Neolithic population movements", "West Asia", "Italy harbors", "HV 4", "Paleolithic inhabitants", "haplogroup HV", "mtDNA control region", "Italian peninsula"], "article_id"=>2648125, "categories"=>["Genetics", "Evolutionary Biology", "Environmental Sciences not elsewhere classified", "Ecology", "Biological Sciences not elsewhere classified"], "users"=>["Sara De Fanti", "Chiara Barbieri", "Stefania Sarno", "Federica Sevini", "Dario Vianello", "Erika Tamm", "Ene Metspalu", "Mannis van Oven", "Alexander Hübner", "Marco Sazzini", "Claudio Franceschi", "Davide Pettener", "Donata Luiselli"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0144391.g002", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Presence_of_major_HV_lineages_in_Italy_/2648125", "title"=>"Presence of major HV lineages in Italy.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-12-07 08:11:39"}

PMC Usage Stats | Further Information

  • {"unique-ip"=>"32", "full-text"=>"36", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
  • {"unique-ip"=>"61", "full-text"=>"56", "pdf"=>"23", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
  • {"unique-ip"=>"65", "full-text"=>"55", "pdf"=>"24", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"37", "supp-data"=>"15", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
  • {"unique-ip"=>"31", "full-text"=>"32", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"12", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2016", "month"=>"3"}
  • {"unique-ip"=>"42", "full-text"=>"41", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"19", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"4"}
  • {"unique-ip"=>"53", "full-text"=>"62", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"22", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2016", "month"=>"5"}
  • {"unique-ip"=>"55", "full-text"=>"63", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"21", "cited-by"=>"0", "year"=>"2016", "month"=>"6"}
  • {"unique-ip"=>"35", "full-text"=>"36", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"18", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2016", "month"=>"7"}
  • {"unique-ip"=>"54", "full-text"=>"68", "pdf"=>"1", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"17", "supp-data"=>"20", "cited-by"=>"0", "year"=>"2016", "month"=>"8"}
  • {"unique-ip"=>"60", "full-text"=>"83", "pdf"=>"10", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"29", "supp-data"=>"15", "cited-by"=>"0", "year"=>"2016", "month"=>"9"}
  • {"unique-ip"=>"38", "full-text"=>"49", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2016", "month"=>"10"}
  • {"unique-ip"=>"64", "full-text"=>"78", "pdf"=>"13", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"14", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
  • {"unique-ip"=>"57", "full-text"=>"59", "pdf"=>"7", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2016", "month"=>"12"}
  • {"unique-ip"=>"68", "full-text"=>"76", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
  • {"unique-ip"=>"75", "full-text"=>"80", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"29", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2017", "month"=>"2"}
  • {"unique-ip"=>"79", "full-text"=>"111", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"24", "supp-data"=>"22", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
  • {"unique-ip"=>"87", "full-text"=>"111", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"14", "supp-data"=>"11", "cited-by"=>"0", "year"=>"2017", "month"=>"4"}
  • {"unique-ip"=>"104", "full-text"=>"157", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"17", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2017", "month"=>"5"}
  • {"unique-ip"=>"89", "full-text"=>"142", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"15", "supp-data"=>"16", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
  • {"unique-ip"=>"81", "full-text"=>"120", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
  • {"unique-ip"=>"104", "full-text"=>"109", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"16", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2017", "month"=>"8"}
  • {"unique-ip"=>"101", "full-text"=>"115", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"22", "supp-data"=>"20", "cited-by"=>"0", "year"=>"2017", "month"=>"9"}
  • {"unique-ip"=>"98", "full-text"=>"114", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"21", "supp-data"=>"33", "cited-by"=>"1", "year"=>"2017", "month"=>"10"}
  • {"unique-ip"=>"109", "full-text"=>"140", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"22", "supp-data"=>"19", "cited-by"=>"0", "year"=>"2017", "month"=>"11"}
  • {"unique-ip"=>"122", "full-text"=>"135", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"12", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2017", "month"=>"12"}
  • {"unique-ip"=>"143", "full-text"=>"166", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"11", "supp-data"=>"15", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
  • {"unique-ip"=>"2", "full-text"=>"1", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"2"}
  • {"unique-ip"=>"151", "full-text"=>"183", "pdf"=>"8", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"80", "supp-data"=>"13", "cited-by"=>"0", "year"=>"2018", "month"=>"3"}
  • {"unique-ip"=>"111", "full-text"=>"136", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"19", "supp-data"=>"3", "cited-by"=>"0", "year"=>"2019", "month"=>"1"}
  • {"unique-ip"=>"75", "full-text"=>"113", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
  • {"unique-ip"=>"142", "full-text"=>"172", "pdf"=>"13", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"22", "supp-data"=>"15", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
  • {"unique-ip"=>"119", "full-text"=>"133", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
  • {"unique-ip"=>"100", "full-text"=>"112", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"12", "supp-data"=>"30", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
  • {"unique-ip"=>"76", "full-text"=>"115", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"28", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
  • {"unique-ip"=>"69", "full-text"=>"80", "pdf"=>"7", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2018", "month"=>"9"}
  • {"unique-ip"=>"87", "full-text"=>"101", "pdf"=>"6", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"30", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
  • {"unique-ip"=>"73", "full-text"=>"83", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"19", "supp-data"=>"11", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
  • {"unique-ip"=>"76", "full-text"=>"86", "pdf"=>"7", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"40", "cited-by"=>"1", "year"=>"2018", "month"=>"11"}
  • {"unique-ip"=>"102", "full-text"=>"113", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"25", "supp-data"=>"28", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
  • {"unique-ip"=>"127", "full-text"=>"155", "pdf"=>"6", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"18", "supp-data"=>"23", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
  • {"unique-ip"=>"103", "full-text"=>"119", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"23", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
  • {"unique-ip"=>"105", "full-text"=>"133", "pdf"=>"7", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}

Relative Metric

{"start_date"=>"2015-01-01T00:00:00Z", "end_date"=>"2015-12-31T00:00:00Z", "subject_areas"=>[]}
Loading … Spinner
There are currently no alerts