Motion-Correction Enabled Ultra-High Resolution In-Vivo 7T-MRI of the Brain
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{"title"=>"Motion-correction enabled ultra-high resolution in-vivo 7T-MRI of the brain", "type"=>"journal", "authors"=>[{"first_name"=>"Christian", "last_name"=>"Federau", "scopus_author_id"=>"23027557700"}, {"first_name"=>"Daniel", "last_name"=>"Gallichan", "scopus_author_id"=>"14818968300"}], "year"=>2016, "source"=>"PLoS ONE", "identifiers"=>{"scopus"=>"2-s2.0-84968736385", "sgr"=>"84968736385", "issn"=>"19326203", "doi"=>"10.1371/journal.pone.0154974", "pmid"=>"27159492", "isbn"=>"1932-6203 (Electronic)\r1932-6203 (Linking)", "pui"=>"610342705"}, "id"=>"798d0598-e2aa-37f1-91dc-4c4fa3109404", "abstract"=>"OBJECTIVES To demonstrate the image quality that can be obtained for multiple contrasts using ultra-high resolution MRI (highest nominal resolution: 350 μm isotropic) at 7T using appropriate motion-correction. MATERIALS AND METHODS An MRI-based fat-excitation motion navigator (which requires no additional hardware) was incorporated into T1-weighted (MP2RAGE, 350 μm nominal isotropic resolution, total scan time 124 mins over 2 sessions. The MP2RAGE also provides quantitative T1-maps), 3D-TSE (380 μm nominal isotropic resolution, total scan time 58 mins) and T2*-weighted protocols (3D-GRE, 380 μm nominal isotropic resolution, total scan time 42 mins) on a 7T MR system. Images from each contrast are presented from a single healthy adult male volunteer (34 years) for direct comparison. The subject provided written consent in accordance with the local review board. RESULTS Images of various brain structures are revealed at unprecedented quality for in-vivo MRI. The presented images permit, for example, to delimit the internal structure of the basal ganglia and thalamus. The single digitationes of the hippocampus are visible, and the gyrus dentatus can be visualized. Intracortical contrast was also observed in the neocortex, including the stria of Gennari of the primary visual cortex. CONCLUSIONS Appropriate motion-correction allows MRI scans to be performed with extended scan times enabling exceptionally high resolution scans with high image quality, with the use of a 7T scanner allowing large brain coverage for 350-380 μm isotropic voxels with total scan times for each contrast ranging from 42 to 124 minutes.", "link"=>"http://www.mendeley.com/research/motioncorrection-enabled-ultrahigh-resolution-invivo-7tmri-brain", "reader_count"=>33, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>4, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>7, "Student > Postgraduate"=>1, "Other"=>1, "Student > Bachelor"=>1, "Lecturer > Senior Lecturer"=>1, "Professor"=>5}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>4, "Researcher"=>9, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>7, "Student > Postgraduate"=>1, "Other"=>1, "Student > Bachelor"=>1, "Lecturer > Senior Lecturer"=>1, "Professor"=>5}, "reader_count_by_subject_area"=>{"Engineering"=>6, "Unspecified"=>6, "Mathematics"=>2, "Agricultural and Biological Sciences"=>1, "Medicine and Dentistry"=>5, "Neuroscience"=>4, "Physics and Astronomy"=>7, "Social Sciences"=>1, "Computer Science"=>1}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>6}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>5}, "Neuroscience"=>{"Neuroscience"=>4}, "Social Sciences"=>{"Social Sciences"=>1}, "Physics and Astronomy"=>{"Physics and Astronomy"=>7}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>1}, "Computer Science"=>{"Computer Science"=>1}, "Mathematics"=>{"Mathematics"=>2}, "Unspecified"=>{"Unspecified"=>6}}, "reader_count_by_country"=>{"Cuba"=>1, "Netherlands"=>1, "United Kingdom"=>1, "Switzerland"=>1, "Germany"=>2}, "group_count"=>0}

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/5210806"], "description"=>"<p>The voxel volume is also shown in nanoliters.</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368563, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g006", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Visual_comparison_of_a_zoomed_section_of_the_MP2RAGE_UNI_image_at_the_acquired_nominal_resolution_of_350_m_isotropic_resolution_right_and_after_downsampling_to_500_m_middle_and_1_mm_left_isotropic_resolutions_/3368563", "title"=>"Visual comparison of a zoomed section of the MP2RAGE UNI image at the acquired nominal resolution of 350 μm isotropic resolution (right), and after downsampling to 500 μm (middle) and 1 mm (left) isotropic resolutions.", "pos_in_sequence"=>7, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210791"], "description"=>"<p>Arrow heads: The stria of Gennari in the primary visual cortex. Arrows: intracortical contrast in the parietal cortex.</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368548, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g005", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Intracortical_contrast_/3368548", "title"=>"Intracortical contrast.", "pos_in_sequence"=>6, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210779"], "description"=>"<p>The digitationes hippocampi are particularly clearly depicted. The segments of the cornu ammonis, and the dentate gyrus can also be visualized. The contours of the amygdala are also well delimited. The right-hand panel shows a 3D rendering of the hippocampus after manual segmentation from this data. CA: Cornu Ammonis; GD: Gyrus Dentatus.</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368536, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g004", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Upper_Row_Oblique_axial_and_sagittal_cross-sections_from_the_TSE_images_of_the_hippocampus_and_Lower_Row_zoomed_in_coronal_section_through_the_hippocampal_head_and_body_/3368536", "title"=>"(Upper Row) Oblique axial and sagittal cross-sections from the TSE images of the hippocampus, and (Lower Row) zoomed in coronal section through the hippocampal head and body.", "pos_in_sequence"=>5, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210764"], "description"=>"<p>ATW: Area Triangularis of Wernicke; C: Nucleus Caudatus; Ncl R: Nucleus Reticularis; L: Nucleus Lentiformis; LGN: Lateral Geniculate Ganglion; MD: Mediodorsal Nucleus; STh: Sub-Thalamic nucleus; VM: ventral Medial nucleus; VLPd: Ventral Lateral Posterior nucleus, dorsal division; VLPv: Ventral Lateral Posterior nucleus, ventral division.</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368521, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g003", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Intrathalalamic_contrast_/3368521", "title"=>"Intrathalalamic contrast.", "pos_in_sequence"=>4, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210749"], "description"=>"<p>Zoomed sections of the basal ganglia and middle-brain for each of the four ultra-high resolution contrasts; mml: medial medullary lamina; mtt: mamillothalamic tract; lml: lateral medullary lamina; GPe: Globus Pallidus externus; Gpi: Globus Pallidus internus; Pulv: Pulvinar; STh: Sub-Thalamic nucleus; VPL: Ventral Posterior Lateral nucleus; VL: ventral lateral nucleus; VA: Ventral Anterior nucleus; MD Mediodorsal nucleus; SC superior colliculus; IC inferior colliculus.</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368506, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g002", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Zoomed_sections_of_the_basal_ganglia_and_middle-brain_for_each_of_the_four_ultra-high_resolution_contrasts_mml_medial_medullary_lamina_mtt_mamillothalamic_tract_lml_lateral_medullary_lamina_GPe_Globus_Pallidus_externus_Gpi_Globus_Pallidus_internus_Pulv_Pu/3368506", "title"=>"Zoomed sections of the basal ganglia and middle-brain for each of the four ultra-high resolution contrasts; mml: medial medullary lamina; mtt: mamillothalamic tract; lml: lateral medullary lamina; GPe: Globus Pallidus externus; Gpi: Globus Pallidus internus; Pulv: Pulvinar; STh: Sub-Thalamic nucleus; VPL: Ventral Posterior Lateral nucleus; VL: ventral lateral nucleus; VA: Ventral Anterior nucleus; MD Mediodorsal nucleus; SC superior colliculus; IC inferior colliculus.", "pos_in_sequence"=>3, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210704", "https://ndownloader.figshare.com/files/5210707", "https://ndownloader.figshare.com/files/5210713", "https://ndownloader.figshare.com/files/5210716", "https://ndownloader.figshare.com/files/5210725", "https://ndownloader.figshare.com/files/5210728"], "description"=>"<div><p>Objectives</p><p>To demonstrate the image quality that can be obtained for multiple contrasts using ultra-high resolution MRI (highest nominal resolution: 350 μm isotropic) at 7T using appropriate motion-correction.</p><p>Materials and Methods</p><p>An MRI-based fat-excitation motion navigator (which requires no additional hardware) was incorporated into T1-weighted (MP2RAGE, 350 μm nominal isotropic resolution, total scan time 124 mins over 2 sessions. The MP2RAGE also provides quantitative T1-maps), 3D-TSE (380 μm nominal isotropic resolution, total scan time 58 mins) and T2*-weighted protocols (3D-GRE, 380 μm nominal isotropic resolution, total scan time 42 mins) on a 7T MR system. Images from each contrast are presented from a single healthy adult male volunteer (34 years) for direct comparison. The subject provided written consent in accordance with the local review board.</p><p>Results</p><p>Images of various brain structures are revealed at unprecedented quality for in-vivo MRI. The presented images permit, for example, to delimit the internal structure of the basal ganglia and thalamus. The single digitationes of the hippocampus are visible, and the gyrus dentatus can be visualized. Intracortical contrast was also observed in the neocortex, including the stria of Gennari of the primary visual cortex.</p><p>Conclusions</p><p>Appropriate motion-correction allows MRI scans to be performed with extended scan times enabling exceptionally high resolution scans with high image quality, with the use of a 7T scanner allowing large brain coverage for 350–380 μm isotropic voxels with total scan times for each contrast ranging from 42 to 124 minutes.</p></div>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368476, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0154974.s001", "https://dx.doi.org/10.1371/journal.pone.0154974.s002", "https://dx.doi.org/10.1371/journal.pone.0154974.s003", "https://dx.doi.org/10.1371/journal.pone.0154974.s004", "https://dx.doi.org/10.1371/journal.pone.0154974.s005", "https://dx.doi.org/10.1371/journal.pone.0154974.s006"], "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Motion-Correction_Enabled_Ultra-High_Resolution_In-Vivo_7T-MRI_of_the_Brain/3368476", "title"=>"Motion-Correction Enabled Ultra-High Resolution In-Vivo 7T-MRI of the Brain", "pos_in_sequence"=>1, "defined_type"=>4, "published_date"=>"2016-05-09 06:01:15"}
  • {"files"=>["https://ndownloader.figshare.com/files/5210734"], "description"=>"<p>Overview axial and coronal sections for each of the four contrasts: uniform T<sub>1</sub>-weighted image (MP2RAGE UNI), quantitative T<sub>1</sub> map (MP2RAGE T1), Turbo-Spin Echo (TSE), and Gradient-Recalled Echo (GRE).</p>", "links"=>[], "tags"=>["scan time 124 mins", "MRI", "scan times", "scan time 42 mins", "2RAGE", "image quality", "contrast", "7 T MR system", "scan time 58 mins", "7 T scanner", "MP"], "article_id"=>3368494, "categories"=>["Medicine", "Cell Biology", "Neuroscience", "Pharmacology", "Biotechnology", "Evolutionary Biology", "Ecology", "Mental Health", "Infectious Diseases"], "users"=>["Christian Federau", "Daniel Gallichan"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0154974.g001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Overview_axial_and_coronal_sections_for_each_of_the_four_contrasts_uniform_T_sub_1_sub_-weighted_image_MP2RAGE_UNI_quantitative_T_sub_1_sub_map_MP2RAGE_T1_Turbo-Spin_Echo_TSE_and_Gradient-Recalled_Echo_GRE_/3368494", "title"=>"Overview axial and coronal sections for each of the four contrasts: uniform T<sub>1</sub>-weighted image (MP2RAGE UNI), quantitative T<sub>1</sub> map (MP2RAGE T1), Turbo-Spin Echo (TSE), and Gradient-Recalled Echo (GRE).", "pos_in_sequence"=>2, "defined_type"=>1, "published_date"=>"2016-05-09 06:01:15"}

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Relative Metric

{"start_date"=>"2016-01-01T00:00:00Z", "end_date"=>"2016-12-31T00:00:00Z", "subject_areas"=>[]}
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