Glycoside Hydrolase (GH) 45 and 5 Candidate Cellulases in Aphelenchoides besseyi Isolated from Bird’s-Nest Fern
Publication Date
July 08, 2016
Journal
PLOS ONE
Authors
Guan Long Wu, Tzu Hao Kuo, Tung Tsuan Tsay, Isheng J. Tsai, et al
Volume
11
Issue
7
Pages
e0158663
DOI
https://dx.plos.org/10.1371/journal.pone.0158663
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0158663
Scopus
84978776986
Mendeley
http://www.mendeley.com/research/glycoside-hydrolase-gh-45-5-candidate-cellulases-aphelenchoides-besseyi-isolated-birdsnest-fern
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Mendeley | Further Information

{"title"=>"Glycoside hydrolase (gh) 45 and 5 candidate cellulases in aphelenchoides besseyi isolated from bird's-nest fern", "type"=>"journal", "authors"=>[{"first_name"=>"Guan Long", "last_name"=>"Wu", "scopus_author_id"=>"57190247948"}, {"first_name"=>"Tzu Hao", "last_name"=>"Kuo", "scopus_author_id"=>"57197312720"}, {"first_name"=>"Tung Tsuan", "last_name"=>"Tsay", "scopus_author_id"=>"36919780100"}, {"first_name"=>"Isheng J.", "last_name"=>"Tsai", "scopus_author_id"=>"36054156300"}, {"first_name"=>"Peichen J.", "last_name"=>"Chen", "scopus_author_id"=>"57137199200"}], "year"=>2016, "source"=>"PLoS ONE", "identifiers"=>{"scopus"=>"2-s2.0-84978776986", "doi"=>"10.1371/journal.pone.0158663", "pui"=>"611245345", "issn"=>"19326203", "pmid"=>"27391812", "sgr"=>"84978776986"}, "id"=>"c3eaaebc-e71e-394b-b9f0-fccf243b0cd9", "abstract"=>"Five Aphelenchoides besseyi isolates collected from bird's-nest ferns or rice possess different parasitic capacities in bird's-nest fern. Two different glycoside hydrolase (GH) 45 genes were identified in the fern isolates, and only one was found in the rice isolates. A Abe GH5-1 gene containing an SCP-like family domain was found only in the fern isolates. Abe GH5-1 gene has five introns suggesting a eukaryotic origin. A maximum likelihood phylogeny revealed that Abe GH5-1 is part of the nematode monophyletic group that can be clearly distinguished from those of other eukaryotic and bacterial GH5 sequences with high bootstrap support values. The fern A. besseyi isolates were the first parasitic plant nematode found to possess both GH5 and GH45 genes. Surveying the genome of the five A. besseyi isolates by Southern blotting using an 834 bp probe targeting the GH5 domain suggests the presence of at least two copies in the fern-origin isolates but none in the rice-origin isolates. The in situ hybridization shows that the Abe GH5-1 gene is expressed in the nematode ovary and testis. Our study provides insights into the diversity of GH in isolates of plant parasitic nematodes of different host origins.", "link"=>"http://www.mendeley.com/research/glycoside-hydrolase-gh-45-5-candidate-cellulases-aphelenchoides-besseyi-isolated-birdsnest-fern", "reader_count"=>7, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Researcher"=>2, "Student > Ph. D. Student"=>2, "Student > Bachelor"=>1, "Student > Doctoral Student"=>1}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Researcher"=>2, "Student > Ph. D. Student"=>2, "Student > Bachelor"=>1, "Student > Doctoral Student"=>1}, "reader_count_by_subject_area"=>{"Environmental Science"=>1, "Agricultural and Biological Sciences"=>6}, "reader_count_by_subdiscipline"=>{"Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>6}, "Environmental Science"=>{"Environmental Science"=>1}}, "group_count"=>2}

Scopus | Further Information

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