Differential DNA Methylation Patterns Are Related to Phellogen Origin and Quality of Quercus suber Cork
Publication Date
January 03, 2017
Authors
Vera Inácio, Pedro M. Barros, Augusta Costa, Cristóvão Roussado, et al
Volume
12
Issue
1
Pages
e0169018
DOI
https://dx.plos.org/10.1371/journal.pone.0169018
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0169018
Scopus
85008186367
Mendeley
http://www.mendeley.com/research/differential-dna-methylation-patterns-related-phellogen-origin-quality-quercus-suber-cork
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Mendeley | Further Information

{"title"=>"Differential DNA methylation patterns are related to phellogen origin and quality of Quercus suber cork", "type"=>"journal", "authors"=>[{"first_name"=>"Vera", "last_name"=>"Inácio", "scopus_author_id"=>"55217485000"}, {"first_name"=>"Pedro M.", "last_name"=>"Barros", "scopus_author_id"=>"55307829400"}, {"first_name"=>"Augusta", "last_name"=>"Costa", "scopus_author_id"=>"7401876749"}, {"first_name"=>"Cristóvão", "last_name"=>"Roussado", "scopus_author_id"=>"57188705377"}, {"first_name"=>"Elsa", "last_name"=>"Gonçalves", "scopus_author_id"=>"57192805655"}, {"first_name"=>"Rita", "last_name"=>"Costa", "scopus_author_id"=>"57097717000"}, {"first_name"=>"José", "last_name"=>"Graça", "scopus_author_id"=>"7004168355"}, {"first_name"=>"M. Margarida", "last_name"=>"Oliveira", "scopus_author_id"=>"24370209300"}, {"first_name"=>"Leonor", "last_name"=>"Morais-Cecílio", "scopus_author_id"=>"55958947400"}], "year"=>2017, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "sgr"=>"85008186367", "doi"=>"10.1371/journal.pone.0169018", "isbn"=>"1111111111", "scopus"=>"2-s2.0-85008186367", "pui"=>"613952784"}, "id"=>"6bebc5fe-28f0-35ff-b8bd-2a86d5e425c5", "abstract"=>"DNA methylation is thought to influence Quercus suber cork quality, which is the main con-straint for its economic valorisation. However, a deep knowledge of the cytosine methylation patterns disclosing the epigenetic variability of trees with different cork quality types is totally missing. This study investigates the hypothesis that variations in DNA methylation contrib-ute to differences in cork cellular characteristics directly related to original or traumatic phel-logen activity. We used MSAPs (Methylation Sensitive Amplified Polymorphism) to assess DNA methylation patterns of cork and leaf tissues of Q. suber adult trees growing in three cork oak stands. The relationship between the detected polymorphisms and the diversity of cork quality traits was explored by a marker-trait analysis focusing on the most relevant quality characteristics. Populations differed widely in cork quality, but only slightly in degree of epigenetic differentiation. Four MSAP markers (1.3% of the total) were significantly asso-ciated with the most noteworthy quality traits: wood inclusions (nails) and porosity. This evi-dence supports the potential role of cytosine methylation in the modulation of differential phellogen activity either involved in localized cell death or in pore production, resulting in dif-ferent cork qualities. Although, the underlying basis of the methylation polymorphism of loci affecting cork quality traits remain unclear, the disclosure of markers statistically associated with cork quality strengthens the potential role of DNA methylation in the regulation of these traits, namely at the phellogen level.", "link"=>"http://www.mendeley.com/research/differential-dna-methylation-patterns-related-phellogen-origin-quality-quercus-suber-cork", "reader_count"=>16, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>2, "Researcher"=>4, "Student > Ph. D. Student"=>1, "Student > Postgraduate"=>1, "Student > Master"=>2, "Student > Bachelor"=>2, "Lecturer"=>1, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>2, "Researcher"=>4, "Student > Ph. D. Student"=>1, "Student > Postgraduate"=>1, "Student > Master"=>2, "Student > Bachelor"=>2, "Lecturer"=>1, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>2, "Biochemistry, Genetics and Molecular Biology"=>3, "Agricultural and Biological Sciences"=>11}, "reader_count_by_subdiscipline"=>{"Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>11}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>3}, "Unspecified"=>{"Unspecified"=>2}}, "reader_count_by_country"=>{"Portugal"=>1}, "group_count"=>0}

Scopus | Further Information

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