A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil
Publication Date
October 27, 2017
Authors
Behnoushsadat Ghodsalavi, Nanna Bygvraa Svenningsen, Xiuli Hao, Stefan Olsson, et al
Volume
12
Issue
10
Pages
e0187116
DOI
https://dx.plos.org/10.1371/journal.pone.0187116
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0187116
Scopus
85032481747
Mendeley
http://www.mendeley.com/research/novel-baiting-microcosm-approach-used-identify-bacterial-community-associated-penicillium-bilaii-hyp
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Mendeley | Further Information

{"title"=>"A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil", "type"=>"journal", "authors"=>[{"first_name"=>"Behnoushsadat", "last_name"=>"Ghodsalavi", "scopus_author_id"=>"55746051600"}, {"first_name"=>"Nanna Bygvraa", "last_name"=>"Svenningsen", "scopus_author_id"=>"55318472200"}, {"first_name"=>"Xiuli", "last_name"=>"Hao", "scopus_author_id"=>"57196275807"}, {"first_name"=>"Stefan", "last_name"=>"Olsson", "scopus_author_id"=>"7202623592"}, {"first_name"=>"Mette Haubjerg", "last_name"=>"Nicolaisen", "scopus_author_id"=>"6603827465"}, {"first_name"=>"Waleed Abu", "last_name"=>"Al-Soud", "scopus_author_id"=>"6506585530"}, {"first_name"=>"Søren J.", "last_name"=>"Sørensen", "scopus_author_id"=>"35592902600"}, {"first_name"=>"Ole", "last_name"=>"Nybroe", "scopus_author_id"=>"7003339409"}], "year"=>2017, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "pui"=>"618960083", "doi"=>"10.1371/journal.pone.0187116", "sgr"=>"85032481747", "scopus"=>"2-s2.0-85032481747", "isbn"=>"1111111111"}, "id"=>"8b5391d9-18af-3fbe-9483-1e94d649f81b", "abstract"=>"It is important to identify and recover bacteria associating with fungi under natural soil conditions to enable eco-physiological studies, and to facilitate the use of bacterial-fungal consortia in environmental biotechnology. We have developed a novel type of baiting microcosm, where fungal hyphae interact with bacteria under close-to-natural soil conditions; an advantage compared to model systems that determine fungal influences on bacterial communities in laboratory media. In the current approach, the hyphae are placed on a solid support, which enables the recovery of hyphae with associated bacteria in contrast to model systems that compare bulk soil and mycosphere soil. We used the baiting microcosm approach to determine, for the first time, the composition of the bacterial community associating in the soil with hyphae of the phosphate-solubilizer, Penicillium bilaii. By applying a cultivation-independent 16S rRNA gene-targeted amplicon sequencing approach, we found a hypha-associated bacterial community with low diversity compared to the bulk soil community and exhibiting massive dominance of Burkholderia OTUs. Burkholderia is known be abundant in soil environments affected by fungi, but the discovery of this massive dominance among bacteria firmly associating with hyphae in soil is novel and made possible by the current bait approach.", "link"=>"http://www.mendeley.com/research/novel-baiting-microcosm-approach-used-identify-bacterial-community-associated-penicillium-bilaii-hyp", "reader_count"=>13, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Researcher"=>5, "Student > Ph. D. Student"=>4, "Student > Postgraduate"=>1, "Student > Master"=>1, "Professor"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Researcher"=>5, "Student > Ph. D. Student"=>4, "Student > Postgraduate"=>1, "Student > Master"=>1, "Professor"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>1, "Environmental Science"=>2, "Biochemistry, Genetics and Molecular Biology"=>2, "Agricultural and Biological Sciences"=>7, "Immunology and Microbiology"=>1}, "reader_count_by_subdiscipline"=>{"Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>7}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>2}, "Unspecified"=>{"Unspecified"=>1}, "Environmental Science"=>{"Environmental Science"=>2}}, "group_count"=>0}

Scopus | Further Information

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