CiteULike | Further Information

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Mendeley | Further Information

{"title"=>"BioStar: An online question & answer resource for the bioinformatics community", "type"=>"journal", "authors"=>[{"first_name"=>"Laurence D.", "last_name"=>"Parnell", "scopus_author_id"=>"8407171100"}, {"first_name"=>"Pierre", "last_name"=>"Lindenbaum", "scopus_author_id"=>"6507401494"}, {"first_name"=>"Khader", "last_name"=>"Shameer", "scopus_author_id"=>"14219636600"}, {"first_name"=>"Giovanni Marco", "last_name"=>"Dall'Olio", "scopus_author_id"=>"36781989700"}, {"first_name"=>"Daniel C.", "last_name"=>"Swan", "scopus_author_id"=>"14044115000"}, {"first_name"=>"Lars Juhl", "last_name"=>"Jensen", "scopus_author_id"=>"35548941900"}, {"first_name"=>"Simon J.", "last_name"=>"Cockell", "scopus_author_id"=>"36166326300"}, {"first_name"=>"Brent S.", "last_name"=>"Pedersen", "scopus_author_id"=>"54401570600"}, {"first_name"=>"Mary E.", "last_name"=>"Mangan", "scopus_author_id"=>"7006431572"}, {"first_name"=>"Christopher A.", "last_name"=>"Miller", "scopus_author_id"=>"35586118800"}, {"first_name"=>"Istvan", "last_name"=>"Albert", "scopus_author_id"=>"7005522163"}], "year"=>2011, "source"=>"PLoS Computational Biology", "identifiers"=>{"doi"=>"10.1371/journal.pcbi.1002216", "sgr"=>"80055089833", "issn"=>"1553734X", "pui"=>"362834422", "isbn"=>"1553-7358 (Linking)", "pmid"=>"22046109", "scopus"=>"2-s2.0-80055089833"}, "id"=>"0f9731a0-6bfc-3ed3-9247-32d3c1908ed8", "abstract"=>"Although the era of big data hasproduced many bioinformatics tools anddatabases, using them effectively oftenrequires specialized knowledge. Manygroups lack bioinformatics expertise, andfrequently find that software documentationis inadequate while local colleaguesmay be overburdened or unfamiliar withspecific applications. Too often, suchproblems create data analysis bottlenecksthat hinder the progress of biologicalresearch. In order to help address thisdeficiency, we present BioStar, a forumbased on the Stack Exchange platformwhere experts and those seeking solutionsto problems of computational biologyexchange ideas. The main strengths ofBioStar are its large and active group ofknowledgeable users, rapid response times,clear organization of questions and responsesthat limit discussion to the topic athand, and ranking of questions andanswers that help identify their usefulness.These rankings, based on communityvotes, also contribute to a reputation scorefor each user, which serves to keep expertcontributors engaged. The BioStar communityhas helped to answer over 2,300questions from over 1,400 users (as of June10, 2011), and has played a critical role inenabling and expediting many researchprojects. BioStar can be accessed athttp://www.biostars.org/.", "link"=>"http://www.mendeley.com/research/biostar-online-question-answer-resource-bioinformatics-community", "reader_count"=>122, "reader_count_by_academic_status"=>{"Unspecified"=>3, "Professor > Associate Professor"=>4, "Researcher"=>51, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>28, "Student > Postgraduate"=>5, "Student > Master"=>7, "Other"=>7, "Student > Bachelor"=>6, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1, "Professor"=>6}, "reader_count_by_user_role"=>{"Unspecified"=>3, "Professor > Associate Professor"=>4, "Researcher"=>51, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>28, "Student > Postgraduate"=>5, "Student > Master"=>7, "Other"=>7, "Student > Bachelor"=>6, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1, "Professor"=>6}, "reader_count_by_subject_area"=>{"Unspecified"=>3, "Agricultural and Biological Sciences"=>73, "Business, Management and Accounting"=>2, "Chemistry"=>1, "Computer Science"=>13, "Economics, Econometrics and Finance"=>1, "Engineering"=>3, "Environmental Science"=>1, "Biochemistry, Genetics and Molecular Biology"=>14, "Medicine and Dentistry"=>4, "Physics and Astronomy"=>3, "Psychology"=>2, "Social Sciences"=>1, "Immunology and Microbiology"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>4}, "Social Sciences"=>{"Social Sciences"=>1}, "Physics and Astronomy"=>{"Physics and Astronomy"=>3}, "Psychology"=>{"Psychology"=>2}, "Unspecified"=>{"Unspecified"=>3}, "Environmental Science"=>{"Environmental Science"=>1}, "Engineering"=>{"Engineering"=>3}, "Chemistry"=>{"Chemistry"=>1}, "Economics, Econometrics and Finance"=>{"Economics, Econometrics and Finance"=>1}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>73}, "Computer Science"=>{"Computer Science"=>13}, "Business, Management and Accounting"=>{"Business, Management and Accounting"=>2}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>14}}, "reader_count_by_country"=>{"Colombia"=>1, "United States"=>12, "United Kingdom"=>4, "Spain"=>3, "India"=>1, "Russia"=>1, "Canada"=>2, "Netherlands"=>2, "Sweden"=>2, "Norway"=>3, "France"=>3, "Tunisia"=>1, "Germany"=>2}, "group_count"=>8}

ORCID | Further Information

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• http://doi.org/10.1093/bib/bbv118
• http://doi.org/10.1177/1541931214581312
• http://doi.org/10.1371/journal.pone.0034238
• http://doi.org/10.1093/bioinformatics/bty198
• http://doi.org/10.4109/jslab.25.166
• http://doi.org/10.1186/s13059-014-0438-7
• http://doi.org/10.1038/ng.3774

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Scopus | Further Information

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Web of Science® | Further Information

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• {"referral"=>"http://en.wikibooks.org/wiki/Next_Generation_Sequencing_(NGS)", "language"=>"English", "title"=>"Next Generation Sequencing (NGS) - Wikibooks, open books for an open world", "type"=>"Blog", "publication"=>"", "published_on"=>"2014-11-26T00:00:00Z", "link_state"=>"REJECTED"}

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• {"url"=>"http%3A%2F%2Fjournals.plos.org%2Fploscompbiol%2Farticle%3Fid%3D10.1371%252Fjournal.pcbi.1002216", "share_count"=>0, "like_count"=>0, "comment_count"=>0, "click_count"=>0, "total_count"=>0}

Journal Comments | Further Information

• {"type"=>"COMMENT", "annotationUri"=>"info:doi/10.1371/annotation/7655adaa-467d-4c62-9aa2-52fb7fe1f43b", "title"=>"Compilation of tweets about this", "body"=>"Pierre Lindenbaum has created a slideshare of tweets about this Manuscript:- http://www.slideshare.net/lindenb/tweeting-for-the-biostar-paper", "isRemoved"=>false, "created"=>"2011-10-29T11:23:44Z", "lastModified"=>"2011-10-29T11:23:44Z", "creator"=>{"userId"=>"83145"}, "highlightedText"=>"", "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pcbi.1002216", "state"=>"published", "journals"=>{"PLoSCompBiol"=>{"journalKey"=>"PLoSCompBiol", "eIssn"=>"1553-7358", "title"=>"PLOS Computational Biology"}}}, "replyTreeSize"=>1, "mostRecentActivity"=>"2011-11-03T16:29:16Z", "replies"=>[{"type"=>"REPLY", "parentID"=>10893, "annotationUri"=>"info:doi/10.1371/reply/de9c4129-02ce-4e54-9b83-87544c4daf7a", "title"=>"RE: Compilation of tweets about this", "body"=>"Seems strange that this nice collection of tweets has to be hosted 'off site'. How come PLoS doesn't do this?\n\nReminds me of this:\nhttp://thebiobastard.blogspot.com/2011/06/plos-one-and-failed-comment-system.html", "isRemoved"=>false, "created"=>"2011-11-03T16:29:16Z", "lastModified"=>"2011-11-03T16:29:16Z", "creator"=>{"userId"=>"167393"}, "highlightedText"=>"", "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pcbi.1002216", "state"=>"published", "journals"=>{"PLoSCompBiol"=>{"journalKey"=>"PLoSCompBiol", "eIssn"=>"1553-7358", "title"=>"PLOS Computational Biology"}}}, "replyTreeSize"=>0, "mostRecentActivity"=>"2011-11-03T16:29:16Z", "replies"=>[]}]}

Nature

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Twitter

• {"id"=>"291160538627596288", "text"=>"@thakki http://t.co/n3IxQNvB http://t.co/FmzRv28S biostars ist schon recht bekannt, weiss aber nicht ob auch im deutschen Sprachraum...", "created_at"=>"2013-01-15T12:30:56Z", "user"=>"ssatta", "user_name"=>"satta", "user_profile_image"=>"http://a0.twimg.com/profile_images/2978146074/2eb7aaa6dd8a00388e8b3f75d71a02ef_normal.jpeg"}
• {"id"=>"377867107016253440", "text"=>"BioStar: An Online Question & Answer Resource for the #Bioinformatics Community http://t.co/b4qJVy0aHI #openscience @PLOSCompBiol", "created_at"=>"2013-09-11T18:51:53Z", "user"=>"Nod_of_Science", "user_name"=>"Fouad B.", "user_profile_image"=>"http://a0.twimg.com/profile_images/378800000318769660/bec8fad4e16bc3f8bd7c0343b9f3f322_normal.jpeg"}
• {"id"=>"507637642423308289", "text"=>"Whoa, just discovered that #bioinformatics resource https://t.co/wCYLIqjoKb was published (2011): http://t.co/aJIEBSAPav", "created_at"=>"2014-09-04T21:13:40Z", "user"=>"itskathylam", "user_name"=>"Kathy Lam", "user_profile_image"=>"http://pbs.twimg.com/profile_images/2702284530/fb0b48d101d1b6be3dc5063867afbd99_normal.jpeg"}
• {"id"=>"791622631615324160", "text"=>"#BioStar paper published 27 Oct 2011. Happy 5-yr anniversary! https://t.co/mpwEfWHto3", "created_at"=>"2016-10-27T12:48:37Z", "user"=>"larry_parnell", "user_name"=>"Larry Parnell", "user_profile_image"=>"http://pbs.twimg.com/profile_images/1554548447/LP_030_2bw_normal.jpg"}
• {"id"=>"791623036248154112", "text"=>"RT @larry_parnell: #BioStar paper published 27 Oct 2011. Happy 5-yr anniversary! https://t.co/mpwEfWHto3", "created_at"=>"2016-10-27T12:50:14Z", "user"=>"ngk009", "user_name"=>"Nick Groves-Kirkby", "user_profile_image"=>"http://pbs.twimg.com/profile_images/454549580/NGK5_normal.jpg"}
• {"id"=>"820607491822284800", "text"=>"great to see BioStar support (https://t.co/c95InlTh5N) in @Impactstory https://t.co/wS7iEwVpch", "created_at"=>"2017-01-15T12:24:06Z", "user"=>"egonwillighagen", "user_name"=>"Egon Willigh?gen", "user_profile_image"=>"http://pbs.twimg.com/profile_images/668462090655371264/SBzaDNdf_normal.png"}

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Figshare

• {"files"=>["https://ndownloader.figshare.com/files/718819"], "description"=>"<p>Discussion begins with a query, generates various answers, and yields additional comments that can lead to further information. Community voting on questions and answers contributes to reputation points and badges earned by users, along with activities such as editing and other types of participation. Question tags and automatically generated “related” questions can lead to further exploration of a topic. BioStar allows for additional answers to be appended at any time. Some questions acquire community “wiki” status if the issue is better served by a group discussion than by a discrete answer.</p>", "links"=>[], "tags"=>["genetics and genomics", "Computational biology", "computer science"], "article_id"=>389169, "categories"=>["Information And Computing Sciences", "Biological Sciences", "Genetics"], "users"=>["Laurence D. Parnell", "Pierre Lindenbaum", "Khader Shameer", "Giovanni Marco Dall'Olio", "Daniel C. Swan", "Lars Juhl Jensen", "Simon J. Cockell", "Brent S. Pedersen", "Mary E. Mangan", "Christopher A. Miller", "István Albert"], "doi"=>"https://dx.doi.org/10.1371/journal.pcbi.1002216.g002", "stats"=>{"downloads"=>6, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_A_typical_discussion_at_BioStar_/389169", "title"=>"A typical discussion at BioStar.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 12:14:19"}
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PMC Usage Stats | Further Information

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Relative Metric

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F1000Prime