FReD: The Floral Reflectance Database — A Web Portal for Analyses of Flower Colour
Publication Date
December 10, 2010
Journal
PLOS ONE
Authors
Sarah E. J. Arnold, Samia Faruq, Vincent Savolainen, Peter W. Mc Owan, et al
Volume
5
Issue
12
Pages
e14287
DOI
https://dx.plos.org/10.1371/journal.pone.0014287
Publisher URL
http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0014287
PubMed
http://www.ncbi.nlm.nih.gov/pubmed/21170326
PubMed Central
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3000818
Europe PMC
http://europepmc.org/abstract/MED/21170326
Web of Science
000285181400010
Scopus
78650732045
Mendeley
http://www.mendeley.com/research/fred-floral-reflectance-database-web-portal-analyses-flower-colour
Events
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Mendeley | Further Information

{"title"=>"FReD: The floral reflectance database - a web portal for analyses of flower colour", "type"=>"journal", "authors"=>[{"first_name"=>"Sarasj E.J.", "last_name"=>"Armold", "scopus_author_id"=>"37076780000"}, {"first_name"=>"Samia", "last_name"=>"Faruq", "scopus_author_id"=>"37076851800"}, {"first_name"=>"Vincent", "last_name"=>"Savolainen", "scopus_author_id"=>"7006741560"}, {"first_name"=>"Peter W.", "last_name"=>"McOwan", "scopus_author_id"=>"6701831464"}, {"first_name"=>"Lars", "last_name"=>"Chittka", "scopus_author_id"=>"7003898924"}], "year"=>2010, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-78650732045", "pui"=>"361019913", "doi"=>"10.1371/journal.pone.0014287", "isbn"=>"1932-6203", "sgr"=>"78650732045", "pmid"=>"21170326"}, "id"=>"56f66c9d-74f5-3ba4-8036-e07ad6c2d4ad", "abstract"=>"Flower colour is of great importance in various fields relating to floral biology and pollinator behaviour. However, subjective human judgements of flower colour may be inaccurate and are irrelevant to the ecology and vision of the flower’s pollinators. For precise, detailed information about the colours of flowers, a full reflectance spectrum for the flower of interest should be used rather than relying on such human assessments. The Floral Reflectance Database (FReD) has been developed to make an extensive collection of such data available to researchers. It is freely available at http://www.reflectance.co.uk. The database allows users to download spectral reflectance data for flower species collected from all over the world. These could, for example, be used in modelling interactions between pollinator vision and plant signals, or analyses of flower colours in various habitats. The database contains functions for calculating flower colour loci according to widely-used models of bee colour space, reflectance graphs of the spectra and an option to search for flowers with similar colours in bee colour space. The Floral Reflectance Database is a valuable new tool for researchers interested in the colours of flowers and their association with pollinator colour vision, containing raw spectral reflectance data for a large number of flower species.", "link"=>"http://www.mendeley.com/research/fred-floral-reflectance-database-web-portal-analyses-flower-colour", "reader_count"=>145, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>6, "Researcher"=>45, "Student > Doctoral Student"=>7, "Student > Ph. D. Student"=>36, "Student > Postgraduate"=>3, "Student > Master"=>19, "Other"=>3, "Student > Bachelor"=>11, "Lecturer"=>2, "Lecturer > Senior Lecturer"=>3, "Professor"=>10}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>6, "Researcher"=>45, "Student > Doctoral Student"=>7, "Student > Ph. D. Student"=>36, "Student > Postgraduate"=>3, "Student > Master"=>19, "Other"=>3, "Student > Bachelor"=>11, "Lecturer"=>2, "Lecturer > Senior Lecturer"=>3, "Professor"=>10}, "reader_count_by_subject_area"=>{"Engineering"=>4, "Unspecified"=>7, "Environmental Science"=>22, "Biochemistry, Genetics and Molecular Biology"=>1, "Agricultural and Biological Sciences"=>101, "Medicine and Dentistry"=>2, "Psychology"=>3, "Chemistry"=>1, "Social Sciences"=>1, "Computer Science"=>1, "Earth and Planetary Sciences"=>2}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>4}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>2}, "Chemistry"=>{"Chemistry"=>1}, "Social Sciences"=>{"Social Sciences"=>1}, "Psychology"=>{"Psychology"=>3}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>2}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>101}, "Computer Science"=>{"Computer Science"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>1}, "Unspecified"=>{"Unspecified"=>7}, "Environmental Science"=>{"Environmental Science"=>22}}, "reader_count_by_country"=>{"Colombia"=>1, "Canada"=>1, "Austria"=>1, "Romania"=>1, "Hungary"=>2, "United States"=>5, "Brazil"=>2, "Serbia and Montenegro"=>1, "United Kingdom"=>2, "France"=>2, "Australia"=>1, "Spain"=>1}, "group_count"=>17}

CrossRef

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/812736"], "description"=>"<p>Samples originate from Germany and Brazil respectively. The reflectance is the proportion of light at each wavelength reflected by the sample.</p>", "links"=>[], "tags"=>["spectra"], "article_id"=>483103, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g001", "stats"=>{"downloads"=>1, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Reflectance_spectra_for_Hepatica_nobilis_and_Pyrostegia_venusta_/483103", "title"=>"Reflectance spectra for <i>Hepatica nobilis</i> and <i>Pyrostegia venusta</i>.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:51:20"}
  • {"files"=>["https://ndownloader.figshare.com/files/813151"], "description"=>"<p>(The query is “blue”, looking for flowers that are either human- or bee-blue). At the top of the page of search results (a), the user has the option to display the colour hexagon (shown) and some basic descriptive statistics about the composition of the results returned. This is hidden by default to reduce page-loading times. The user can then click on an individual species record to bring up more detailed information (b) about that plant species and its floral reflectance graph, as well as viewing the colour locus for that species in three different bee colour space models.</p>", "links"=>[], "tags"=>["produced", "fred"], "article_id"=>483521, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g004", "stats"=>{"downloads"=>1, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Sample_search_results_produced_by_FReD_in_response_to_a_search_query_/483521", "title"=>"Sample search results produced by FReD in response to a search query.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:53:34"}
  • {"files"=>["https://ndownloader.figshare.com/files/813432"], "description"=>"<p>Summary of the searchable data fields in FReD and examples of the data format used in each.</p>", "links"=>[], "tags"=>["searchable", "fields", "fred", "examples"], "article_id"=>483797, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.t001", "stats"=>{"downloads"=>1, "page_views"=>2, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Summary_of_the_searchable_data_fields_in_FReD_and_examples_of_the_data_format_used_in_each_/483797", "title"=>"Summary of the searchable data fields in FReD and examples of the data format used in each.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 21:55:03"}
  • {"files"=>["https://ndownloader.figshare.com/files/813290"], "description"=>"<p>The user can select up to ten points from the right-hand list, clicking to place each point at the desired location on the colour hexagon. There is an option at the bottom of the page to choose the radius of the search area for each point. When the user then selects “search now”, a page of results will be returned containing all the flower records with colour hexagon loci located within any of the search areas specified. Here, the user has selected to search two areas, each of radius 0.5 hexagon units, one area containing flowers that appear blue to bees (point 1) and one area containing flowers that appear UV-blue to bees (point 2). Therefore, the results will consist of bee-blue and UV-blue flower records only, and only those within the areas selected.</p>", "links"=>[], "tags"=>["ecology/behavioral ecology", "ecology/evolutionary ecology", "physiology/sensory systems", "plant biology/plant-biotic interactions", "computer science/natural and synthetic vision"], "article_id"=>483649, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g005", "stats"=>{"downloads"=>0, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_HexSearch_page_/483649", "title"=>"HexSearch page.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:54:16"}
  • {"files"=>["https://ndownloader.figshare.com/files/813367"], "description"=>"<p>The graph shows the relative percentages of plant species with flowers of different bee colours in four different locations: Ribeirão Preto, Brazil; São Paulo, Brazil; Strausberg, Germany and the Dovrefjell mountains, Norway <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0014287#pone.0014287-Chittka1\" target=\"_blank\">[1]</a>, <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0014287#pone.0014287-Gumbert1\" target=\"_blank\">[33]</a>. The differences between the four locations are significant (χ<sup>2</sup> test, χ<sup>2</sup> = 42.3, <i>p</i> = 0.0002), but notably, plants with flowers of at least five out of six arbitrary bee colours are present at all locations, suggesting that in all habitats, selection is likely to result in the presence of a range of flower colours.</p>", "links"=>[], "tags"=>["compositions", "flora"], "article_id"=>483736, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g006", "stats"=>{"downloads"=>1, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Colour_compositions_of_flora_from_different_worldwide_locations_/483736", "title"=>"Colour compositions of flora from different worldwide locations.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:54:46"}
  • {"files"=>["https://ndownloader.figshare.com/files/812813"], "description"=>"<p>Individual boxes indicate discrete data tables and the fields within each one. Lines linking boxes show data tables that are linked by identification codes (ID numbers); the linked fields are indicated by * in the originating table, mapping to fields that are underlined in subsidiary tables. Superscript “1” indicates those records which correspond to the mandatory DarwinCore standard fields.</p>", "links"=>[], "tags"=>["ecology/behavioral ecology", "ecology/evolutionary ecology", "physiology/sensory systems", "plant biology/plant-biotic interactions", "computer science/natural and synthetic vision"], "article_id"=>483175, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g002", "stats"=>{"downloads"=>0, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Database_structure_of_FReD_/483175", "title"=>"Database structure of FReD.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:51:47"}
  • {"files"=>["https://ndownloader.figshare.com/files/812994"], "description"=>"<p>This page on the FReD website allows the user to choose from many different search options in order to look for specific entries within the database, e.g. reflectance spectra for flowers from a particular genus or collected in a particular country. Most data fields are provided as drop-down menus for ease of use (here, the user is selecting “blue” from the bee colour menu); users can search for keywords or other free text using the basic search bar provided at the top of each page.</p>", "links"=>[], "tags"=>["ecology/behavioral ecology", "ecology/evolutionary ecology", "physiology/sensory systems", "plant biology/plant-biotic interactions", "computer science/natural and synthetic vision"], "article_id"=>483359, "categories"=>["Infectious Diseases", "Virology", "Information And Computing Sciences", "Medicine", "Ecology"], "users"=>["Sarah E. J. Arnold", "Samia Faruq", "Vincent Savolainen", "Peter W. McOwan", "Lars Chittka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0014287.g003", "stats"=>{"downloads"=>3, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Advanced_search_page_in_FReD_/483359", "title"=>"Advanced search page in FReD.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 21:52:41"}

PMC Usage Stats | Further Information

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Relative Metric

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