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{"title"=>"Combining clinical, pathological, and demographic factors refines prognosis of lung cancer: A population-based study", "type"=>"journal", "authors"=>[{"first_name"=>"Joseph", "last_name"=>"Putila", "scopus_author_id"=>"41461772800"}, {"first_name"=>"Scot C.", "last_name"=>"Remick", "scopus_author_id"=>"7006149793"}, {"first_name"=>"Nancy Lan", "last_name"=>"Guo", "scopus_author_id"=>"23094473400"}], "year"=>2011, "source"=>"PLoS ONE", "identifiers"=>{"scopus"=>"2-s2.0-79952153997", "pmid"=>"21364765", "sgr"=>"79952153997", "doi"=>"10.1371/journal.pone.0017493", "issn"=>"19326203", "pui"=>"361354806"}, "id"=>"0ed385e8-8726-3416-8c88-2a2c4fa86f37", "abstract"=>"In the treatment of lung cancer, an accurate estimation of patient clinical outcome is essential for choosing an appropriate course of therapy. It is important to develop a prognostic stratification model which combines clinical, pathological and demographic factors for individualized clinical decision making.", "link"=>"http://www.mendeley.com/research/combining-clinical-pathological-demographic-factors-refines-prognosis-lung-cancer-populationbased-st", "reader_count"=>9, "reader_count_by_academic_status"=>{"Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>1, "Student > Master"=>3, "Student > Bachelor"=>1}, "reader_count_by_user_role"=>{"Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>1, "Student > Master"=>3, "Student > Bachelor"=>1}, "reader_count_by_subject_area"=>{"Engineering"=>1, "Mathematics"=>1, "Medicine and Dentistry"=>4, "Pharmacology, Toxicology and Pharmaceutical Science"=>1, "Computer Science"=>1, "Psychology"=>1}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>1}, "Medicine and Dentistry"=>{"Medicine and Dentistry"=>4}, "Psychology"=>{"Psychology"=>1}, "Computer Science"=>{"Computer Science"=>1}, "Mathematics"=>{"Mathematics"=>1}, "Pharmacology, Toxicology and Pharmaceutical Science"=>{"Pharmacology, Toxicology and Pharmaceutical Science"=>1}}, "group_count"=>1}

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• http://doi.org/10.1371/journal.pone.0100994
• http://doi.org/10.1182/blood-2013-08-496935
• http://doi.org/10.1038/gt.2014.67
• http://doi.org/10.1016/j.jegh.2017.09.004
• http://doi.org/10.4046/trd.2013.75.4.140
• http://doi.org/10.1182/asheducation-2014.1.82
• http://doi.org/10.2214/AJR.19.21982
• http://doi.org/10.1097/JTO.0000000000000691
• http://doi.org/10.1038/bjc.2017.232
• http://doi.org/10.1097/JTO.0000000000000652

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• {"type"=>"COMMENT", "annotationUri"=>"info:doi/10.1371/annotation/15e9a5ca-7ac4-4239-b319-0e2487567947", "title"=>"Formal correction", "body"=>"In Fig 2A and 2B, the \"Low\" and \"High\" risk groups were mislabeled. The corrected figure is attached.\r\n", "isRemoved"=>false, "created"=>"2011-02-28T13:41:31Z", "lastModified"=>"2011-02-28T13:41:31Z", "creator"=>{"userId"=>"94447"}, "highlightedText"=>"", "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pone.0017493", "state"=>"published", "journals"=>{"PLoSONE"=>{"journalKey"=>"PLoSONE", "eIssn"=>"1932-6203", "title"=>"PLOS ONE"}}}, "replyTreeSize"=>0, "mostRecentActivity"=>"2011-02-28T13:41:31Z", "replies"=>[]}
• {"type"=>"COMMENT", "annotationUri"=>"info:doi/10.1371/annotation/83775b34-91f3-4ff4-91bc-210e70b596d9", "title"=>"Addendum", "body"=>"An online prognostic tool, Personalized Rx, was developed based on this study at www.personalizedrx.org.", "isRemoved"=>false, "created"=>"2011-03-03T14:44:47Z", "lastModified"=>"2011-03-03T14:44:47Z", "creator"=>{"userId"=>"94447"}, "highlightedText"=>"", "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pone.0017493", "state"=>"published", "journals"=>{"PLoSONE"=>{"journalKey"=>"PLoSONE", "eIssn"=>"1932-6203", "title"=>"PLOS ONE"}}}, "replyTreeSize"=>0, "mostRecentActivity"=>"2011-03-03T14:44:47Z", "replies"=>[]}
• {"type"=>"COMMENT", "annotationUri"=>"info:doi/10.1371/annotation/97baa161-5405-4e58-8c83-ab48465ee047", "title"=>"Online tool available at www.personalizedrx.org", "body"=>"An online prognostic tool, Personalized Rx, was developed based on this study at www.personalizedrx.org.\r\n\r\n", "highlightedText"=>"''The comprehensive model significantly improves individualized prognosis upon AJCC tumor staging and is robust across a range of treatment modalities, the spectrum of patient risk, and in novel patient cohorts.''\nhttp://plosone.org/article/info:doi/10.1371/journal.pone.0017493#article1.front1.article-meta1.abstract1.sec3.p1", "isRemoved"=>false, "created"=>"2011-03-14T12:43:04Z", "lastModified"=>"2011-03-14T12:43:04Z", "creator"=>{"userId"=>"94447"}, "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pone.0017493", "state"=>"published", "journals"=>{"PLoSONE"=>{"journalKey"=>"PLoSONE", "eIssn"=>"1932-6203", "title"=>"PLOS ONE"}}}, "replyTreeSize"=>0, "mostRecentActivity"=>"2011-03-14T12:43:04Z", "replies"=>[]}

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Figshare

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• {"files"=>["https://ndownloader.figshare.com/files/795671"], "description"=>"<p>a) Histogram of Hazard Scores obtained from the comprehensive model. b) Probability of death from lung cancer prior to 24 months based on Hazard Scores calculated using the comprehensive model. c) Kaplan-Meier survival plots for low-, intermediate-, and high-risk groups determined by the comprehensive model (blue) and AJCC staging alone (orange). d) Average survival of each group in months, with log-rank <i>P</i>-values shown. L: low-risk; Int: intermediate-risk; H: high-risk defined by the full model. Stage only model contains patient with stage 1, 2, 3a, 3b and 4. e) Kaplan-Meier survival plots for each risk group in patients who received surgery without radiation. f) Average survival for risk groups in patients who received surgery without radiation. L: low-risk; Int: intermediate-risk; H: high-risk. Stage only model contains patient with stage 1, 2, 3a, 3b and 4.</p>", "links"=>[], "tags"=>["adenocarcinoma", "patients", "staged", "ajcc"], "article_id"=>466042, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.g002", "stats"=>{"downloads"=>1, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Results_of_survival_analysis_on_lung_adenocarcinoma_patients_staged_using_AJCC_3_rd_or_6_th_Edition_/466042", "title"=>"Results of survival analysis on lung adenocarcinoma patients staged using AJCC 3^rd or 6^th Edition.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:18:57"}
• {"files"=>["https://ndownloader.figshare.com/files/796262"], "description"=>"<p>*Sub-stages for stage I and II patients are combined as it was not possible to differentiate between sub-stages for all patients staged with the AJCC 3^rd and 6^th staging systems. Age is represented as the mean age with the standard deviation in parentheses.</p>", "links"=>[], "tags"=>["characteristics", "histology", "non-small", "cancer", "ajcc", "staging", "editions", "seer"], "article_id"=>466630, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.t001", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Outline_of_patient_clinical_characteristics_for_major_histology_of_non_small_cell_lung_cancer_and_AJCC_staging_editions_retrieved_from_SEER_database_/466630", "title"=>"Outline of patient clinical characteristics for major histology of non-small cell lung cancer and AJCC staging editions retrieved from SEER database.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 20:22:06"}
• {"files"=>["https://ndownloader.figshare.com/files/796223"], "description"=>"<p>FM: full model; SO: AJCC stage only.</p>", "links"=>[], "tags"=>["scores", "separated", "ajcc", "coding", "histology"], "article_id"=>466595, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.t005", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Brier_Scores_from_each_model_for_each_of_the_patient_cohorts_separated_into_AJCC_coding_system_treatment_modality_and_histology_where_possible_/466595", "title"=>"Brier Scores from each model for each of the patient cohorts, separated into AJCC coding system, treatment modality, and histology where possible.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 20:21:55"}
• {"files"=>["https://ndownloader.figshare.com/files/795821"], "description"=>"<p>a) Histogram of Hazard Scores obtained from the comprehensive model. b) Probability of death from lung cancer prior to 24 months based on Hazard Scores calculated using the comprehensive model. c) Kaplan-Meier survival plots for low-, intermediate-, and high-risk groups determined by the comprehensive model (blue) and AJCC staging alone (orange). d) Average survival of each group in months, with log-rank <i>P</i>-values shown. e) Kaplan-Meier survival plots for each risk group in patients having received surgery without radiation. f.) Average survival for risk groups in patients who received surgery without radiation. L: low-risk; Int: intermediate-risk; H: high-risk defined by the full model. Stage only model contains patient with stage 1, 2, 3a, 3b and 4.</p>", "links"=>[], "tags"=>["squamous", "cancer", "patients", "staged", "ajcc"], "article_id"=>466190, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.g004", "stats"=>{"downloads"=>0, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Results_of_survival_analysis_on_squamous_cell_lung_cancer_patients_staged_using_AJCC_3_rd_or_6_th_Edition_/466190", "title"=>"Results of survival analysis on squamous cell lung cancer patients staged using AJCC 3^rd or 6^th Edition.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:19:47"}
• {"files"=>["https://ndownloader.figshare.com/files/796118"], "description"=>"<p>Results of survival analyses performed on patient cohorts from the Director's Challenge Study and the Mary Babb Randolph Cancer Center at West Virginia University.</p>", "links"=>[], "tags"=>["analyses", "performed", "cohorts", "mary", "babb", "randolph", "cancer", "virginia"], "article_id"=>466478, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.g008", "stats"=>{"downloads"=>1, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Results_of_survival_analyses_performed_on_patient_cohorts_from_the_Director_s_Challenge_Study_and_the_Mary_Babb_Randolph_Cancer_Center_at_West_Virginia_University_/466478", "title"=>"Results of survival analyses performed on patient cohorts from the Director's Challenge Study and the Mary Babb Randolph Cancer Center at West Virginia University.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:21:18"}
• {"files"=>["https://ndownloader.figshare.com/files/795602"], "description"=>"<p><i>P</i><0.05 indicates that the full model is significantly more accurate in predicting disease-specific survival than tumor stage.</p>", "links"=>[], "tags"=>["60", "months", "ajcc", "editions", "30", "cases", "converted", "adenocarcinoma", "squamous", "cancer", "roc"], "article_id"=>465962, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.g001", "stats"=>{"downloads"=>0, "page_views"=>0, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Prediction_of_survival_at_60_months_for_the_AJCC_3_rd_and_6_th_Editions_top_and_30_months_for_the_cases_converted_to_the_AJCC_7_th_Edition_bottom_for_both_lung_adenocarcinoma_left_and_squamous_cell_lung_cancer_right_using_ROC_curves_/465962", "title"=>"Prediction of survival at 60 months for the AJCC 3^rd and 6^th Editions (top) and 30 months for the cases converted to the AJCC 7^th Edition (bottom) for both lung adenocarcinoma (left) and squamous cell lung cancer (right) using ROC curves.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:18:29"}
• {"files"=>["https://ndownloader.figshare.com/files/795892"], "description"=>"<p>a) Histogram of Hazard Scores obtained from the comprehensive model. b) Probability of death from lung cancer prior to 24 months based on Hazard Scores calculated using the comprehensive model. c) Kaplan-Meier survival plots for low-, intermediate-, and high-risk groups determined by the comprehensive model (blue) and AJCC staging alone (orange). d.) Average survival of each group in months, with log-rank <i>P</i>-values shown. e) Kaplan-Meier survival plots for each risk group in patients who received surgery without radiation. f.) Average survival for risk groups in patients who received surgery without radiation. L: low-risk; Int: intermediate-risk; H: high-risk defined by the full model. Stage only model contains patient with stage 1, 2, 3a, 3b and 4.</p>", "links"=>[], "tags"=>["squamous", "cancer", "patients", "converted", "ajcc"], "article_id"=>466263, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.g005", "stats"=>{"downloads"=>0, "page_views"=>2, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Results_of_survival_analysis_on_squamous_cell_lung_cancer_patients_converted_to_AJCC_7_th_Edition_/466263", "title"=>"Results of survival analysis on squamous cell lung cancer patients converted to AJCC 7^th Edition.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 20:20:12"}
• {"files"=>["https://ndownloader.figshare.com/files/796291"], "description"=>"<p>*Age is represented as the mean age with the standard deviation in parentheses.</p>", "links"=>[], "tags"=>["characteristics", "non-small", "cancer", "validation"], "article_id"=>466660, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.t002", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Outline_of_patient_clinical_characteristics_for_external_non_small_cell_lung_cancer_validation_sets_/466660", "title"=>"Outline of patient clinical characteristics for external non-small cell lung cancer validation sets.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 20:22:19"}
• {"files"=>["https://ndownloader.figshare.com/files/796195"], "description"=>"<p>FM: full model; SO: AJCC stage only.</p>", "links"=>[], "tags"=>["separated", "ajcc", "coding", "histology"], "article_id"=>466566, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.t004", "stats"=>{"downloads"=>0, "page_views"=>8, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Nagelkerke_s_R_2_values_from_each_model_for_each_of_the_patient_cohorts_separated_into_AJCC_coding_system_treatment_modality_and_histology_where_possible_/466566", "title"=>"Nagelkerke's R² values from each model for each of the patient cohorts, separated into AJCC coding system, treatment modality, and histology where possible.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 20:21:45"}
• {"files"=>["https://ndownloader.figshare.com/files/796315"], "description"=>"<p>FM: full model; SO: AJCC stage only.</p>", "links"=>[], "tags"=>["c-statistics", "separated", "ajcc", "coding", "histology"], "article_id"=>466687, "categories"=>["Cancer", "Mathematics", "Medicine", "Immunology", "Biotechnology"], "users"=>["Joseph Putila", "Scot C. Remick", "Nancy Lan Guo"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0017493.t003", "stats"=>{"downloads"=>2, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Harrell_s_C_statistics_from_each_model_for_each_of_the_patient_cohorts_separated_into_AJCC_coding_system_treatment_modality_and_histology_where_possible_/466687", "title"=>"Harrell's C-statistics from each model for each of the patient cohorts, separated into AJCC coding system, treatment modality, and histology where possible.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 20:22:29"}

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Relative Metric

{"start_date"=>"2011-01-01T00:00:00Z", "end_date"=>"2011-12-31T00:00:00Z", "subject_areas"=>[{"subject_area"=>"/Medicine and health sciences/Surgical and invasive medical procedures", "average_usage"=>[259, 536, 669, 792, 927, 1032, 1110, 1201, 1283, 1355, 1434, 1511, 1593, 1655, 1737, 1785, 1848, 1901, 1964, 2033, 2078, 2126, 2160, 2213, 2286, 2363, 2409, 2456, 2515, 2555, 2626, 2683, 2743, 2811, 2875, 2939, 3006]}]}

F1000Prime