Association between the SERPING1 Gene and Age-Related Macular Degeneration and Polypoidal Choroidal Vasculopathy in Japanese
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{"title"=>"Association between the serping1 gene and age-related macular degeneration and polypoidal choroidal vasculopathy in japanese", "type"=>"journal", "authors"=>[{"first_name"=>"Isao", "last_name"=>"Nakata", "scopus_author_id"=>"37039604100"}, {"first_name"=>"Kenji", "last_name"=>"Yamashiro", "scopus_author_id"=>"7004717077"}, {"first_name"=>"Ryo", "last_name"=>"Yamada", "scopus_author_id"=>"7202185709"}, {"first_name"=>"Norimoto", "last_name"=>"Gotoh", "scopus_author_id"=>"7006670313"}, {"first_name"=>"Hideo", "last_name"=>"Nakanishi", "scopus_author_id"=>"35362301300"}, {"first_name"=>"Hisako", "last_name"=>"Hayashi", "scopus_author_id"=>"35362005700"}, {"first_name"=>"Akitaka", "last_name"=>"Tsujikawa", "scopus_author_id"=>"7003458378"}, {"first_name"=>"Atsushi", "last_name"=>"Otani", "scopus_author_id"=>"57201195994"}, {"first_name"=>"Masaaki", "last_name"=>"Saito", "scopus_author_id"=>"35254495900"}, {"first_name"=>"Tomohiro", "last_name"=>"Iida", "scopus_author_id"=>"7402683591"}, {"first_name"=>"Akio", "last_name"=>"Oishi", "scopus_author_id"=>"7005277994"}, {"first_name"=>"Keitaro", "last_name"=>"Matsuo", "scopus_author_id"=>"7401602814"}, {"first_name"=>"Kazuo", "last_name"=>"Tajima", "scopus_author_id"=>"35374000300"}, {"first_name"=>"Fumihiko", "last_name"=>"Matsuda", "scopus_author_id"=>"7202165578"}, {"first_name"=>"Nagahisa", "last_name"=>"Yoshimura", "scopus_author_id"=>"7402665481"}], "year"=>2011, "source"=>"PLoS ONE", "identifiers"=>{"pui"=>"361671319", "sgr"=>"79955382690", "pmid"=>"21526158", "scopus"=>"2-s2.0-79955382690", "isbn"=>"1932-6203 (Electronic)\\n1932-6203 (Linking)", "doi"=>"10.1371/journal.pone.0019108", "issn"=>"19326203"}, "id"=>"d5b24faf-4a81-3dcb-95d8-b184262b9e6d", "abstract"=>"PURPOSE: Recently, a complement component 1 inhibitor (SERPING1) gene polymorphism was identified as a novel risk factor for age-related macular degeneration (AMD) in Caucasians. We aimed to investigate whether variations in SERPING1 are associated with typical AMD or with polypoidal choroidal vasculopathy (PCV) in a Japanese population.\\n\\nMETHODS: We performed a case-control study in a group of Japanese patients with typical AMD (n = 401) or PCV (n = 510) and in 2 independent control groups--336 cataract patients without age-related maculopathy and 1,194 healthy Japanese individuals. Differences in the observed genotypic distribution between the case and control groups were tested using chi-square test for trend. Age and gender were adjusted using logistic regression analysis.\\n\\nRESULTS: We targeted rs2511989 as the haplotype-tagging single nucleotide polymorphism (SNP) for the SERPING1 gene, which was reported to be associated with the risk of AMD in Caucasians. Although we compared the genotypic distributions of rs2511989 in typical AMD and PCV patients against 2 independent control groups (cataract patients and healthy Japanese individuals), SERPING1 rs2511989 was not significantly associated with typical AMD (P = 0.932 and 0.513, respectively) or PCV (P = 0.505 and 0.141, respectively). After correction for age and gender differences based on a logistic regression model, the difference in genotypic distributions remained insignificant (P>0.05). Our sample size had a statistical power of more than 90% to detect an association of a risk allele with an odds ratio reported in the original studies for rs2511989 for developing AMD.\\n\\nCONCLUSIONS: In the present study, we could not replicate the reported association between SERPING1 and either neovascular AMD or PCV in a Japanese population; thus, the results suggest that SERPING1 does not play a significant role in the risk of developing AMD or PCV in Japanese.", "link"=>"http://www.mendeley.com/research/association-between-serping1-gene-agerelated-macular-degeneration-polypoidal-choroidal-vasculopathy", "reader_count"=>13, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>3, "Researcher"=>5, "Student > Postgraduate"=>1, "Student > Master"=>1, "Other"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>3, "Researcher"=>5, "Student > Postgraduate"=>1, "Student > Master"=>1, "Other"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>4, "Medicine and Dentistry"=>5, "Agricultural and Biological Sciences"=>3, "Psychology"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>5}, "Psychology"=>{"Psychology"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>3}, "Unspecified"=>{"Unspecified"=>4}}, "group_count"=>0}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/782421"], "description"=>"<p>Genotype data were retrieved from HapMap CEU (Utah residents with ancestry from northern and western Europe; A) and JPT (Japanese in Tokyo, Japan; B) data sets. Haplotype blocks were determined using the “four-gamete rule” option in Haploview; all HapMap single nucleotide polymorphisms on <i>SERPING1</i> gene are in the same block in both populations. Each box provides estimated statistics of the coefficient of determination (r<sup>2</sup>), with darker shades representing stronger LD.</p>", "links"=>[], "tags"=>["disequilibrium", "complement", "inhibitor", "caucasian", "japanese"], "article_id"=>452774, "categories"=>["Genetics", "Medicine"], "users"=>["Isao Nakata", "Kenji Yamashiro", "Ryo Yamada", "Norimoto Gotoh", "Hideo Nakanishi", "Hisako Hayashi", "Akitaka Tsujikawa", "Atsushi Otani", "Masaaki Saito", "Tomohiro Iida", "Akio Oishi", "Keitaro Matsuo", "Kazuo Tajima", "Fumihiko Matsuda", "Nagahisa Yoshimura"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0019108.g001", "stats"=>{"downloads"=>0, "page_views"=>3, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Linkage_disequilibrium_LD_structure_across_the_complement_component_1_inhibitor_SERPING1_gene_in_Caucasian_and_Japanese_populations_/452774", "title"=>"Linkage disequilibrium (LD) structure across the complement component 1 inhibitor (<i>SERPING1</i>) gene in Caucasian and Japanese populations.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 19:05:33"}
  • {"files"=>["https://ndownloader.figshare.com/files/782527"], "description"=>"<p>MAF, minor allele frequency.</p>", "links"=>[], "tags"=>["observed", "amd"], "article_id"=>452883, "categories"=>["Genetics", "Medicine"], "users"=>["Isao Nakata", "Kenji Yamashiro", "Ryo Yamada", "Norimoto Gotoh", "Hideo Nakanishi", "Hisako Hayashi", "Akitaka Tsujikawa", "Atsushi Otani", "Masaaki Saito", "Tomohiro Iida", "Akio Oishi", "Keitaro Matsuo", "Kazuo Tajima", "Fumihiko Matsuda", "Nagahisa Yoshimura"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0019108.t004", "stats"=>{"downloads"=>1, "page_views"=>7, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Comparison_of_Association_Observed_between_AMD_and_SERPING1_rs2511989_/452883", "title"=>"Comparison of Association Observed between AMD and <i>SERPING1</i> rs2511989.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 19:06:11"}
  • {"files"=>["https://ndownloader.figshare.com/files/782662"], "description"=>"<p>tAMD, typical age-related macular degeneration; PCV, polypoidal choroidal vasculopathy; MAF, minor allele frequency.</p><p>*Adjusted for age and gender.</p><p>†Statistical power for detecting the association reported in the previous study (odds ratio 0.63).</p>", "links"=>[], "tags"=>["rs2511989", "genotypic", "distributions"], "article_id"=>453018, "categories"=>["Genetics", "Medicine"], "users"=>["Isao Nakata", "Kenji Yamashiro", "Ryo Yamada", "Norimoto Gotoh", "Hideo Nakanishi", "Hisako Hayashi", "Akitaka Tsujikawa", "Atsushi Otani", "Masaaki Saito", "Tomohiro Iida", "Akio Oishi", "Keitaro Matsuo", "Kazuo Tajima", "Fumihiko Matsuda", "Nagahisa Yoshimura"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0019108.t002", "stats"=>{"downloads"=>0, "page_views"=>5, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_SERPING1_rs2511989_Genotypic_Distributions_and_Results_of_Association_Tests_and_Power_Analysis_/453018", "title"=>"<i>SERPING1</i> rs2511989 Genotypic Distributions and Results of Association Tests and Power Analysis.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 19:06:56"}
  • {"files"=>["https://ndownloader.figshare.com/files/782615"], "description"=>"<p>*Adjusted for age and gender.</p><p>tAMD, typical age-related macular degeneration; PCV, polypoidal choroidal vasculopathy.</p>", "links"=>[], "tags"=>["ratios"], "article_id"=>452978, "categories"=>["Genetics", "Medicine"], "users"=>["Isao Nakata", "Kenji Yamashiro", "Ryo Yamada", "Norimoto Gotoh", "Hideo Nakanishi", "Hisako Hayashi", "Akitaka Tsujikawa", "Atsushi Otani", "Masaaki Saito", "Tomohiro Iida", "Akio Oishi", "Keitaro Matsuo", "Kazuo Tajima", "Fumihiko Matsuda", "Nagahisa Yoshimura"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0019108.t003", "stats"=>{"downloads"=>0, "page_views"=>3, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Odds_Ratios_in_Various_Genetic_Models_/452978", "title"=>"Odds Ratios in Various Genetic Models.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 19:06:41"}
  • {"files"=>["https://ndownloader.figshare.com/files/782574"], "description"=>"<p>tAMD, typical age-related macular degeneration; PCV, polypoidal choroidal vasculopathy; SD, standard deviation.</p><p>*Cataract patients without age-related maculopathy.</p><p>†Healthy Japanese individuals.</p>", "links"=>[], "tags"=>["genetics and genomics", "ophthalmology"], "article_id"=>452935, "categories"=>["Genetics", "Medicine"], "users"=>["Isao Nakata", "Kenji Yamashiro", "Ryo Yamada", "Norimoto Gotoh", "Hideo Nakanishi", "Hisako Hayashi", "Akitaka Tsujikawa", "Atsushi Otani", "Masaaki Saito", "Tomohiro Iida", "Akio Oishi", "Keitaro Matsuo", "Kazuo Tajima", "Fumihiko Matsuda", "Nagahisa Yoshimura"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0019108.t001", "stats"=>{"downloads"=>0, "page_views"=>1, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Characteristics_of_the_Study_Population_/452935", "title"=>"Characteristics of the Study Population.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2013-02-20 19:06:26"}

PMC Usage Stats | Further Information

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Relative Metric

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