Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
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{"title"=>"Darwin core: An evolving community-developed biodiversity data standard", "type"=>"journal", "authors"=>[{"first_name"=>"John", "last_name"=>"Wieczorek", "scopus_author_id"=>"7006757591"}, {"first_name"=>"David", "last_name"=>"Bloom", "scopus_author_id"=>"54884869900"}, {"first_name"=>"Robert", "last_name"=>"Guralnick", "scopus_author_id"=>"24176866500"}, {"first_name"=>"Stan", "last_name"=>"Blum", "scopus_author_id"=>"7102168758"}, {"first_name"=>"Markus", "last_name"=>"Döring", "scopus_author_id"=>"54884662600"}, {"first_name"=>"Renato", "last_name"=>"Giovanni", "scopus_author_id"=>"36967551700"}, {"first_name"=>"Tim", "last_name"=>"Robertson", "scopus_author_id"=>"54884618300"}, {"first_name"=>"David", "last_name"=>"Vieglais", "scopus_author_id"=>"6507582456"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"22238640", "doi"=>"10.1371/journal.pone.0029715", "sgr"=>"84855417923", "isbn"=>"1932-6203 (Linking)", "scopus"=>"2-s2.0-84855417923", "issn"=>"19326203", "pui"=>"364045348"}, "id"=>"fcc81a16-bac9-3123-b5d1-9764763e837a", "abstract"=>"Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamental to this advance are definitions of common terms. This paper describes the evolution and development of Darwin Core, a data standard for publishing and integrating biodiversity information. We focus on the categories of terms that define the standard, differences between simple and relational Darwin Core, how the standard has been implemented, and the community processes that are essential for maintenance and growth of the standard. We present case-study extensions of the Darwin Core into new research communities, including metagenomics and genetic resources. We close by showing how Darwin Core records are integrated to create new knowledge products documenting species distributions and changes due to environmental perturbations.", "link"=>"http://www.mendeley.com/research/darwin-core-evolving-communitydeveloped-biodiversity-data-standard-1", "reader_count"=>403, "reader_count_by_academic_status"=>{"Unspecified"=>10, "Professor > Associate Professor"=>12, "Librarian"=>9, "Researcher"=>130, "Student > Doctoral Student"=>14, "Student > Ph. D. Student"=>63, "Student > Postgraduate"=>17, "Other"=>45, "Student > Master"=>51, "Student > Bachelor"=>30, "Lecturer"=>4, "Lecturer > Senior Lecturer"=>4, "Professor"=>14}, "reader_count_by_user_role"=>{"Unspecified"=>10, "Professor > Associate Professor"=>12, "Librarian"=>9, "Researcher"=>130, "Student > Doctoral Student"=>14, "Student > Ph. D. Student"=>63, "Student > Postgraduate"=>17, "Other"=>45, "Student > Master"=>51, "Student > Bachelor"=>30, "Lecturer"=>4, "Lecturer > Senior Lecturer"=>4, "Professor"=>14}, "reader_count_by_subject_area"=>{"Unspecified"=>15, "Agricultural and Biological Sciences"=>229, "Arts and Humanities"=>2, "Computer Science"=>74, "Earth and Planetary Sciences"=>16, "Engineering"=>4, "Environmental Science"=>42, "Biochemistry, Genetics and Molecular Biology"=>10, "Mathematics"=>1, "Physics and Astronomy"=>1, "Psychology"=>1, "Social Sciences"=>7, "Linguistics"=>1}, "reader_count_by_subdiscipline"=>{"Social Sciences"=>{"Social Sciences"=>7}, "Physics and Astronomy"=>{"Physics and Astronomy"=>1}, "Psychology"=>{"Psychology"=>1}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>15}, "Environmental Science"=>{"Environmental Science"=>42}, "Arts and Humanities"=>{"Arts and Humanities"=>2}, "Engineering"=>{"Engineering"=>4}, "Earth and Planetary Sciences"=>{"Earth and Planetary Sciences"=>16}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>229}, "Computer Science"=>{"Computer Science"=>74}, "Linguistics"=>{"Linguistics"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>10}}, "reader_count_by_country"=>{"United States"=>37, "Portugal"=>2, "Costa Rica"=>2, "Netherlands"=>4, "Sweden"=>2, "Brazil"=>12, "Chile"=>2, "France"=>1, "Colombia"=>4, "Ecuador"=>1, "Argentina"=>1, "Japan"=>1, "United Kingdom"=>13, "Kenya"=>1, "Spain"=>9, "India"=>1, "Canada"=>3, "Belgium"=>1, "Norway"=>2, "Finland"=>2, "Denmark"=>2, "South Africa"=>2, "Italy"=>2, "Mexico"=>3, "Israel"=>1, "Australia"=>3, "Germany"=>10}, "group_count"=>51}

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  • {"files"=>["https://ndownloader.figshare.com/files/695146"], "description"=>"<p>This subset of Darwin Core terms represents descriptive data about organisms that can be represented in one file with one row per record and one column per term. Two additional categories (orange) expand Darwin Core with concepts that require a more complex data structure, such as multiple measurements from a single specimen, and cannot be represented easily in Simple Darwin Core.</p>", "links"=>[], "tags"=>["darwin", "comprised", "categories"], "article_id"=>365558, "categories"=>["Information And Computing Sciences", "Biological Sciences", "Genetics", "Ecology", "Evolutionary Biology"], "users"=>["John Wieczorek", "David Bloom", "Robert Guralnick", "Stan Blum", "Markus Döring", "Renato Giovanni", "Tim Robertson", "David Vieglais"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0029715.g002", "stats"=>{"downloads"=>6, "page_views"=>19, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Darwin_Core_Categories_Simple_Darwin_Core_is_comprised_of_seven_categories_of_terms_green_/365558", "title"=>"Darwin Core Categories: Simple Darwin Core is comprised of seven categories of terms (green).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2013-02-20 10:09:05"}

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  • {"unique-ip"=>"33", "full-text"=>"39", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"9"}

Relative Metric

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