Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types
- Publication Date
- February 01, 2012
- Journal
- PLOS ONE
- Authors
- Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, et al
- Volume
- 7
- Issue
- 2
- Pages
- e30733
- DOI
- https://dx.plos.org/10.1371/journal.pone.0030733
- Publisher URL
- http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0030733
- PubMed
- http://www.ncbi.nlm.nih.gov/pubmed/22319583
- PubMed Central
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3270023
- Europe PMC
- http://europepmc.org/abstract/MED/22319583
- Web of Science
- 000301977500016
- Scopus
- 84863045982
- Mendeley
- http://www.mendeley.com/research/circular-rnas-predominant-transcript-isoform-hundreds-human-genes-diverse-cell-types
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CiteULike | Further Information
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Mendeley | Further Information
{"title"=>"Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types", "type"=>"journal", "authors"=>[{"first_name"=>"Julia", "last_name"=>"Salzman", "scopus_author_id"=>"7004770708"}, {"first_name"=>"Charles", "last_name"=>"Gawad", "scopus_author_id"=>"8843775900"}, {"first_name"=>"Peter Lincoln", "last_name"=>"Wang", "scopus_author_id"=>"38062696600"}, {"first_name"=>"Norman", "last_name"=>"Lacayo", "scopus_author_id"=>"6507333888"}, {"first_name"=>"Patrick O.", "last_name"=>"Brown", "scopus_author_id"=>"35414776900"}], "year"=>2012, "source"=>"PLoS ONE", "identifiers"=>{"pui"=>"364181123", "issn"=>"19326203", "isbn"=>"1932-6203 (Electronic)\\r1932-6203 (Linking)", "doi"=>"10.1371/journal.pone.0030733", "scopus"=>"2-s2.0-84863045982", "pmid"=>"22319583", "sgr"=>"84863045982"}, "id"=>"ed69635e-c46d-3753-a154-1328f588505b", "abstract"=>"Most human pre-mRNAs are spliced into linear molecules that retain the exon order defined by the genomic sequence. By deep sequencing of RNA from a variety of normal and malignant human cells, we found RNA transcripts from many human genes in which the exons were arranged in a non-canonical order. Statistical estimates and biochemical assays provided strong evidence that a substantial fraction of the spliced transcripts from hundreds of genes are circular RNAs. Our results suggest that a non-canonical mode of RNA splicing, resulting in a circular RNA isoform, is a general feature of the gene expression program in human cells.", "link"=>"http://www.mendeley.com/research/circular-rnas-predominant-transcript-isoform-hundreds-human-genes-diverse-cell-types", "reader_count"=>646, "reader_count_by_academic_status"=>{"Unspecified"=>12, "Professor > Associate Professor"=>36, "Student > Doctoral Student"=>28, "Researcher"=>168, "Student > Ph. D. Student"=>184, "Student > Postgraduate"=>30, "Other"=>21, "Student > Master"=>75, "Student > Bachelor"=>75, "Lecturer"=>2, "Professor"=>15}, "reader_count_by_user_role"=>{"Unspecified"=>12, "Professor > Associate Professor"=>36, "Student > Doctoral Student"=>28, "Researcher"=>168, "Student > Ph. D. Student"=>184, "Student > Postgraduate"=>30, "Other"=>21, "Student > Master"=>75, "Student > Bachelor"=>75, "Lecturer"=>2, "Professor"=>15}, "reader_count_by_subject_area"=>{"Unspecified"=>17, "Agricultural and Biological Sciences"=>392, "Philosophy"=>1, "Arts and Humanities"=>1, "Business, Management and Accounting"=>1, "Chemistry"=>8, "Computer Science"=>13, "Engineering"=>9, "Biochemistry, Genetics and Molecular Biology"=>145, "Mathematics"=>1, "Medicine and Dentistry"=>43, "Neuroscience"=>8, "Pharmacology, Toxicology and Pharmaceutical Science"=>1, "Social Sciences"=>1, "Immunology and Microbiology"=>4, "Linguistics"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>43}, "Social Sciences"=>{"Social Sciences"=>1}, "Mathematics"=>{"Mathematics"=>1}, "Unspecified"=>{"Unspecified"=>17}, "Pharmacology, Toxicology and Pharmaceutical Science"=>{"Pharmacology, Toxicology and Pharmaceutical Science"=>1}, "Arts and Humanities"=>{"Arts and Humanities"=>1}, "Engineering"=>{"Engineering"=>9}, "Chemistry"=>{"Chemistry"=>8}, "Neuroscience"=>{"Neuroscience"=>8}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>4}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>392}, "Computer Science"=>{"Computer Science"=>13}, "Business, Management and Accounting"=>{"Business, Management and Accounting"=>1}, "Linguistics"=>{"Linguistics"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>145}, "Philosophy"=>{"Philosophy"=>1}}, "reader_count_by_country"=>{"Argentina"=>1, "United States"=>27, "Uruguay"=>1, "Japan"=>6, "United Kingdom"=>6, "Portugal"=>1, "Spain"=>1, "Canada"=>2, "Sweden"=>1, "Czech Republic"=>1, "Norway"=>1, "China"=>4, "Luxembourg"=>2, "Brazil"=>5, "Denmark"=>2, "Italy"=>3, "South Africa"=>1, "Israel"=>1, "France"=>2, "Germany"=>5}, "group_count"=>27}CrossRef
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Journal Comments | Further Information
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- {"type"=>"COMMENT", "annotationUri"=>"info:doi/10.1371/annotation/b87bdac2-96e3-41e5-8335-e744b3c5ca1f", "title"=>"Note on missing panel in Figure 4", "body"=>"The top left panel of Figure 4 was lost during the production process. It can be found at http://www.stanford.edu/~horence/original-figure4.eps. ", "isRemoved"=>false, "created"=>"2014-08-19T00:03:19Z", "lastModified"=>"2014-08-19T00:03:19Z", "creator"=>{"userId"=>"402815"}, "highlightedText"=>"", "competingInterestStatement"=>{"creatorWasPrompted"=>true, "hasCompetingInterests"=>false}, "parentArticle"=>{"doi"=>"info:doi/10.1371/journal.pone.0030733", "state"=>"published", "journals"=>{"PLoSONE"=>{"journalKey"=>"PLoSONE", "eIssn"=>"1932-6203", "title"=>"PLOS ONE"}}}, "replyTreeSize"=>0, "mostRecentActivity"=>"2014-08-19T00:03:19Z", "replies"=>[]}
- {"id"=>"307133029388783618", "text"=>"Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types Salzman 2012 http://t.co/39t2fIAjpE", "created_at"=>"2013-02-28T14:19:55Z", "user"=>"Jen_Angela", "user_name"=>"Jennifer Angela", "user_profile_image"=>"http://a0.twimg.com/profile_images/1616591058/RTIpartyJen2_normal.jpg"}
- {"id"=>"307514824802312192", "text"=>"PLOS ONE: Circular #RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes... http://t.co/UObPmlCzLQ #rnomics_rna @MyEN", "created_at"=>"2013-03-01T15:37:02Z", "user"=>"rnomics", "user_name"=>"Fabrice Leclerc", "user_profile_image"=>"http://a0.twimg.com/profile_images/1607343775/Imagen19_2x_normal.png"}
- {"id"=>"308957572906500096", "text"=>"Reading the Salzman paper that initially detected many circular RNAs by RNA-seq analysis alone. Lovely. http://t.co/2RH0PaPG9c", "created_at"=>"2013-03-05T15:10:00Z", "user"=>"joe_pickrell", "user_name"=>"Joe Pickrell", "user_profile_image"=>"http://a0.twimg.com/profile_images/1397871733/cuba_normal.jpg"}
- {"id"=>"308958510350213121", "text"=>"I and presumably many others were doing similar analyses, never noticed this. Chance and the prepared mind indeed.. http://t.co/2RH0PaPG9c", "created_at"=>"2013-03-05T15:13:43Z", "user"=>"joe_pickrell", "user_name"=>"Joe Pickrell", "user_profile_image"=>"http://a0.twimg.com/profile_images/1397871733/cuba_normal.jpg"}
- {"id"=>"332071926581309440", "text"=>"Circular RNAs discovered by a comput'nal statistician, Julia Salzman, published @PLOSONE 2012. #Howcoolisthat #bog13 http://t.co/Z9JwfnQ3ZX", "created_at"=>"2013-05-08T09:58:11Z", "user"=>"KevinADavies", "user_name"=>"Kevin Davies", "user_profile_image"=>"http://a0.twimg.com/profile_images/2959353264/17b1dda6e3ed5f97f2fdaad5345c2514_normal.jpeg"}
- {"id"=>"332110378274287616", "text"=>"Circular RNAs Are the Predominant Transcript Isoform from Hundreds of Human Genes in Diverse Cell Types http://t.co/kSwctIwSiV #bog13", "created_at"=>"2013-05-08T12:30:59Z", "user"=>"genetics_blog", "user_name"=>"Stephen Turner", "user_profile_image"=>"http://a0.twimg.com/profile_images/1356990961/pic2-square-cropped-350x350_normal.jpg"}
- {"id"=>"332125680890441729", "text"=>"@pauldennyuk @KevinADavies @PLOSONE yeah, seems the circular RNA got lost to be found again! http://t.co/XKKneB4sgJ http://t.co/nHQj2DlWEi", "created_at"=>"2013-05-08T13:31:47Z", "user"=>"bioinfosm", "user_name"=>"Sumit Middha", "user_profile_image"=>"http://a0.twimg.com/profile_images/1628963369/sm_normal.jpg"}
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- {"month"=>"10", "year"=>"2020", "pdf_views"=>"136", "xml_views"=>"1", "html_views"=>"103"}
- {"month"=>"11", "year"=>"2020", "pdf_views"=>"110", "xml_views"=>"0", "html_views"=>"124"}
- {"month"=>"12", "year"=>"2020", "pdf_views"=>"97", "xml_views"=>"3", "html_views"=>"112"}
- {"month"=>"1", "year"=>"2021", "pdf_views"=>"76", "xml_views"=>"2", "html_views"=>"90"}
PMC Usage Stats | Further Information
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- {"unique-ip"=>"26", "full-text"=>"24", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"14", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2012", "month"=>"11"}
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- {"unique-ip"=>"37", "full-text"=>"31", "pdf"=>"22", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"36", "supp-data"=>"6", "cited-by"=>"0", "year"=>"2013", "month"=>"11"}
- {"unique-ip"=>"36", "full-text"=>"35", "pdf"=>"18", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"33", "supp-data"=>"9", "cited-by"=>"0", "year"=>"2013", "month"=>"12"}
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- {"unique-ip"=>"70", "full-text"=>"75", "pdf"=>"41", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"29", "supp-data"=>"24", "cited-by"=>"0", "year"=>"2015", "month"=>"5"}
- {"unique-ip"=>"80", "full-text"=>"79", "pdf"=>"51", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"27", "supp-data"=>"16", "cited-by"=>"3", "year"=>"2015", "month"=>"6"}
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- {"unique-ip"=>"72", "full-text"=>"71", "pdf"=>"40", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"28", "supp-data"=>"19", "cited-by"=>"0", "year"=>"2015", "month"=>"10"}
- {"unique-ip"=>"43", "full-text"=>"32", "pdf"=>"20", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"21", "supp-data"=>"14", "cited-by"=>"3", "year"=>"2014", "month"=>"7"}
- {"unique-ip"=>"32", "full-text"=>"27", "pdf"=>"14", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"9", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2014", "month"=>"8"}
- {"unique-ip"=>"62", "full-text"=>"36", "pdf"=>"17", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"25", "supp-data"=>"37", "cited-by"=>"0", "year"=>"2014", "month"=>"9"}
- {"unique-ip"=>"62", "full-text"=>"54", "pdf"=>"43", "abstract"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"17", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2014", "month"=>"10"}
- {"unique-ip"=>"36", "full-text"=>"37", "pdf"=>"20", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
- {"unique-ip"=>"58", "full-text"=>"59", "pdf"=>"35", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"13", "cited-by"=>"0", "year"=>"2014", "month"=>"11"}
- {"unique-ip"=>"50", "full-text"=>"51", "pdf"=>"39", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2014", "month"=>"12"}
- {"unique-ip"=>"55", "full-text"=>"96", "pdf"=>"30", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"10", "supp-data"=>"5", "cited-by"=>"1", "year"=>"2015", "month"=>"1"}
- {"unique-ip"=>"87", "full-text"=>"85", "pdf"=>"49", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"14", "supp-data"=>"12", "cited-by"=>"17", "year"=>"2015", "month"=>"11"}
- {"unique-ip"=>"77", "full-text"=>"82", "pdf"=>"55", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"3", "cited-by"=>"7", "year"=>"2015", "month"=>"12"}
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Relative Metric
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