Genetic Evidence for Multiple Sources of the Non-Native Fish Cichlasoma urophthalmus (Günther; Mayan Cichlids) in Southern Florida
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{"title"=>"Genetic evidence for multiple sources of the non-native fish Cichlasoma urophthalmus (Günther; Mayan Cichlids) in southern Florida", "type"=>"journal", "authors"=>[{"first_name"=>"Elizabeth", "last_name"=>"Harrison", "scopus_author_id"=>"55654488500"}, {"first_name"=>"Joel C.", "last_name"=>"Trexler", "scopus_author_id"=>"7005437570"}, {"first_name"=>"Timothy M.", "last_name"=>"Collins", "scopus_author_id"=>"7201800708"}, {"first_name"=>"Ella", "last_name"=>"Vazquez-Domínguez", "scopus_author_id"=>"6602352176"}, {"first_name"=>"Ulises", "last_name"=>"Razo-Mendivil", "scopus_author_id"=>"56000895800"}, {"first_name"=>"Wilfredo A.", "last_name"=>"Matamoros", "scopus_author_id"=>"26633025800"}, {"first_name"=>"Christian", "last_name"=>"Barrientos", "scopus_author_id"=>"23979584900"}], "year"=>2014, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "pui"=>"600017399", "sgr"=>"84906958207", "pmid"=>"25184569", "scopus"=>"2-s2.0-84906958207", "doi"=>"10.1371/journal.pone.0104173"}, "id"=>"e252e90e-c0d8-3fd2-bb36-3db92b137b39", "abstract"=>"The number and diversity of source populations may influence the genetic diversity of newly introduced populations and affect the likelihood of their establishment and spread. We used the cytochrome b mitochondrial gene and nuclear microsatellite loci to identify the sources of a successful invader in southern Florida, USA, Cichlasoma urophthalmus (Mayan cichlid). Our cytochrome b data supported an introduction from Guatemala, while our microsatellite data suggested movement of Mayan Cichlids from the upper Yucatán Peninsula to Guatemala and introductions from Guatemala and Belize to Florida. The mismatch between mitochondrial and nuclear genomes suggests admixture of a female lineage from Guatemala, where all individuals were fixed for the mitochondrial haplotype found in the introduced population, and a more diverse but also relatively small number of individuals from Belize. The Florida cytochrome b haplotype appears to be absent from Belize (0 out of 136 fish screened from Belize had this haplotype). Genetic structure within the Florida population was minimal, indicating a panmictic population, while Mexican and Central American samples displayed more genetic subdivision. Individuals from the Upper Yucatán Peninsula and the Petén region of Guatemala were more genetically similar to each other than to fish from nearby sites and movement of Mayan Cichlids between these regions occurred thousands of generations ago, suggestive of pre-Columbian human transportation of Mayan Cichlids through this region. Mayan Cichlids present a rare example of cytonuclear disequilibrium and reduced genetic diversity in the introduced population that persists more than 30 years (at least 7-8 generations) after introduction. We suggest that hybridization occurred in ornamental fish farms in Florida and may contribute their establishment in the novel habitat. Hybridization prior to release may contribute to other successful invasions.", "link"=>"http://www.mendeley.com/research/genetic-evidence-multiple-sources-nonnative-fish-cichlasoma-urophthalmus-g%C3%BCnther-mayan-cichlids-sout", "reader_count"=>20, "reader_count_by_academic_status"=>{"Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>5, "Student > Postgraduate"=>1, "Student > Master"=>5, "Other"=>1, "Student > Bachelor"=>2, "Unspecified"=>1}, "reader_count_by_user_role"=>{"Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Doctoral Student"=>1, "Student > Ph. D. Student"=>5, "Student > Postgraduate"=>1, "Student > Master"=>5, "Other"=>1, "Student > Bachelor"=>2, "Unspecified"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>2, "Environmental Science"=>3, "Agricultural and Biological Sciences"=>15}, "reader_count_by_subdiscipline"=>{"Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>15}, "Unspecified"=>{"Unspecified"=>2}, "Environmental Science"=>{"Environmental Science"=>3}}, "reader_count_by_country"=>{"United States"=>1}, "group_count"=>0}

Scopus | Further Information

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Figshare

  • {"files"=>["https://ndownloader.figshare.com/files/1659885"], "description"=>"<p>CA denotes Central America; YP denotes the Yucatán Peninsula. # and % represent “number” and “percentage” respectively. H<sup>o</sup> and H<sup>e</sup> represent observed and expected heterozygosities.</p><p>Summary statistics calculated for microsatellite markers.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159803, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.t002", "stats"=>{"downloads"=>2, "page_views"=>10, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Summary_statistics_calculated_for_microsatellite_markers_/1159803", "title"=>"Summary statistics calculated for microsatellite markers.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659884"], "description"=>"<p>The time of events in generations are labelled backwards in time and the conditions were as follows: t1</p><p>Prior distribution of parameters used in ABC analyses.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159802, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.t001", "stats"=>{"downloads"=>0, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Prior_distribution_of_parameters_used_in_ABC_analyses_/1159802", "title"=>"Prior distribution of parameters used in ABC analyses.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659873"], "description"=>"<p>Numbers on the map correspond to site numbers in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0104173#pone.0104173.s002\" target=\"_blank\">Table S1</a>. Light grey shading in box A indicates the range of Mayan Cichlids (Miller 1966) in the native range. “Mexico” denotes samples from Mexico that are not within the Yucatán Peninsula (states of Yucatán, Campeche and Quintana Roo). YP = Yucatán Peninsula; FL = Florida.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159791, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.g001", "stats"=>{"downloads"=>9, "page_views"=>126, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Map_of_sampling_sites_for_Mayan_Cichlids_in_Mexico_and_Central_America_A_and_Florida_B_/1159791", "title"=>"Map of sampling sites for Mayan Cichlids in Mexico and Central America (A) and Florida (B).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659874"], "description"=>"<p>Clade credibility for branches are shown. Samples that exhibited the same haplotype from East and West Florida, Honduras and Nicaragua were each collapsed into a single branch for clarity. Branches are color-coded by region. * denotes sites where specimens were also analyzed at microsatellite loci.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159792, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.g002", "stats"=>{"downloads"=>1, "page_views"=>14, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Consensus_tree_generated_by_Bayesian_phylogenetic_analysis_using_the_sister_species_Pet_233_nia_splendida_as_an_outgroup_/1159792", "title"=>"Consensus tree generated by Bayesian phylogenetic analysis using the sister species, <i>Peténia splendida</i>, as an outgroup.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659887", "https://ndownloader.figshare.com/files/1659888", "https://ndownloader.figshare.com/files/1659889"], "description"=>"<div><p>The number and diversity of source populations may influence the genetic diversity of newly introduced populations and affect the likelihood of their establishment and spread. We used the cytochrome b mitochondrial gene and nuclear microsatellite loci to identify the sources of a successful invader in southern Florida, USA, <i>Cichlasoma urophthalmus</i> (Mayan cichlid). Our cytochrome b data supported an introduction from Guatemala, while our microsatellite data suggested movement of Mayan Cichlids from the upper Yucatán Peninsula to Guatemala and introductions from Guatemala and Belize to Florida. The mismatch between mitochondrial and nuclear genomes suggests admixture of a female lineage from Guatemala, where all individuals were fixed for the mitochondrial haplotype found in the introduced population, and a more diverse but also relatively small number of individuals from Belize. The Florida cytochrome b haplotype appears to be absent from Belize (0 out of 136 fish screened from Belize had this haplotype). Genetic structure within the Florida population was minimal, indicating a panmictic population, while Mexican and Central American samples displayed more genetic subdivision. Individuals from the Upper Yucatán Peninsula and the Petén region of Guatemala were more genetically similar to each other than to fish from nearby sites and movement of Mayan Cichlids between these regions occurred thousands of generations ago, suggestive of pre-Columbian human transportation of Mayan Cichlids through this region. Mayan Cichlids present a rare example of cytonuclear disequilibrium and reduced genetic diversity in the introduced population that persists more than 30 years (at least 7–8 generations) after introduction. We suggest that hybridization occurred in ornamental fish farms in Florida and may contribute their establishment in the novel habitat. Hybridization prior to release may contribute to other successful invasions.</p></div>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159805, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0104173.s001", "https://dx.doi.org/10.1371/journal.pone.0104173.s002", "https://dx.doi.org/10.1371/journal.pone.0104173.s003"], "stats"=>{"downloads"=>5, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/Genetic_Evidence_for_Multiple_Sources_of_the_Non_Native_Fish_Cichlasoma_urophthalmus_G_nther_Mayan_Cichlids_in_Southern_Florida/1159805", "title"=>"Genetic Evidence for Multiple Sources of the Non-Native Fish <i>Cichlasoma urophthalmus</i> (Günther; Mayan Cichlids) in Southern Florida", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659886"], "description"=>"<p>For parameters, N = effective population size, Nf = number of founders in each population, t = time of events in generations, and db = duration of bottleneck in generations.</p><p>The parameter values correspond to those in <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0104173#pone-0104173-g005\" target=\"_blank\">Figure 5B and 5E</a>.</p><p>NA denotes parameter that were absent in the model.</p><p>Median estimates of parameters from group 1, scenario 10 and from group 2, scenario 4.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159804, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.t003", "stats"=>{"downloads"=>0, "page_views"=>12, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Median_estimates_of_parameters_from_group_1_scenario_10_and_from_group_2_scenario_4_/1159804", "title"=>"Median estimates of parameters from group 1, scenario 10 and from group 2, scenario 4.", "pos_in_sequence"=>0, "defined_type"=>3, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659883"], "description"=>"<p>Model (A), scenario (B), and logistic regression of posterior probabilities for scenario 10 (C) from group 1, and model (D), scenario (E) and logistic regression of posterior probabilities for scenario 4 from group 2. Population numbers are indicated with the population names in the flow chart. YP refers to Yucatán Peninsula.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159801, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.g005", "stats"=>{"downloads"=>3, "page_views"=>13, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Most_supported_models_and_posterior_probabilities_from_groups_1_and_2_/1159801", "title"=>"Most supported models and posterior probabilities from groups 1 and 2.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659882"], "description"=>"<p>Box plots of cluster analysis of sites within Central America for K = 2 (C) and within Florida for K = 2 (D).</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159800, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.g004", "stats"=>{"downloads"=>3, "page_views"=>15, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Box_plots_showing_STRUCTURE_analysis_of_Mexico_Central_America_and_Florida_for_K_8202_8202_2_A_and_K_8202_8202_3_B_/1159800", "title"=>"Box plots showing STRUCTURE analysis of Mexico, Central America and Florida for K = 2 (A) and K = 3 (B).", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-03 03:15:08"}
  • {"files"=>["https://ndownloader.figshare.com/files/1659876"], "description"=>"<p>Circles represent different haplotypes; sizes of partitions within circles are proportional to the number of specimens per haplotype. Colors correspond to localities as indicated. Line lengths signify the number of bases separating each haplotype; the short lines symbolize one base and the long line denotes six bases.</p>", "links"=>[], "tags"=>["guatemala", "Florida cytochrome b haplotype", "Upper Yucat án Peninsula", "Mayan Cichlids", "Central American samples", "cytochrome b data", "Yucat án Peninsula", "introduction", "belize", "diversity", "usa", "Pet én region", "cytochrome b mitochondrial gene"], "article_id"=>1159794, "categories"=>["Uncategorised"], "users"=>["Elizabeth Harrison", "Joel C. Trexler", "Timothy M. Collins", "Ella Vázquez-Domínguez", "Ulises Razo-Mendivil", "Wilfredo A. Matamoros", "Christian Barrientos"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0104173.g003", "stats"=>{"downloads"=>2, "page_views"=>21, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Haplotype_network_of_cytochrome_b_in_Mexico_Central_America_and_Florida_/1159794", "title"=>"Haplotype network of cytochrome b in Mexico, Central America and Florida.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2014-09-03 03:15:08"}

PMC Usage Stats | Further Information

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Relative Metric

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