Characterization, Identification and Application of Lactic Acid Bacteria Isolated from Forage Paddy Rice Silage
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{"title"=>"Characterization, identification and application of lactic acid bacteria isolated from forage paddy rice silage", "type"=>"journal", "authors"=>[{"first_name"=>"Kuikui", "last_name"=>"Ni", "scopus_author_id"=>"56573644400"}, {"first_name"=>"Yanping", "last_name"=>"Wang", "scopus_author_id"=>"55734011700"}, {"first_name"=>"Dongxia", "last_name"=>"Li", "scopus_author_id"=>"56573041300"}, {"first_name"=>"Yimin", "last_name"=>"Cai", "scopus_author_id"=>"7401751039"}, {"first_name"=>"Huili", "last_name"=>"Pang", "scopus_author_id"=>"36656104700"}], "year"=>2015, "source"=>"PLoS ONE", "identifiers"=>{"issn"=>"19326203", "scopus"=>"2-s2.0-84925796580", "pui"=>"603281550", "doi"=>"10.1371/journal.pone.0121967", "isbn"=>"1932-6203", "sgr"=>"84925796580", "pmid"=>"25803578"}, "id"=>"6e233d33-5443-390a-9724-51ae29ad0d9d", "abstract"=>"There has been growing interest to develop forage rice as a new feed resource for livestock. This study was to characterize the natural population of lactic acid bacteria (LAB) and select potentially excellent strains for paddy rice silage preparation in China. One hundred and twenty-six strains were isolated and screened from paddy rice silage prepared using a small-scale fermentation system, and ninety-nine of these isolates were considered to be LAB based on their Gram-positive and catalase-negative morphology and the production of most of their metabolic products as lactic acid. These isolates were divided into eight groups (A-H) on the basis of their morphological and biochemical characteristics. The Group A to H strains were identified as Lactobacillus (L.) plantarum subsp. plantarum (species ratio: 8.1%), L. casei (5.1%), Leuconostoc (Ln.) pseudomesenteroides (11.1%), Pediococcus (P.) pentosaceus (24.2%), Enterococcus (E.) mundtii (12.1%), Lactococcus (Lc.) garvieae (15.2%), E. faecium (9.1%) and Lc. lactis subsp. lactis (15.2%) based on sequence analyses of their 16S rRNA and recA genes. P. pentosaceus was the most abundant member of the LAB population in the paddy rice silage. A selected strain, namely L. casei R 465, was found to be able to grow under low pH conditions and to improve the silage quality with low pH and a relatively high content of lactic acid. This study demonstrated that forage paddy rice silage contains abundant LAB species and its silage can be well preserved by inoculation with LAB, and that strain R 465 can be a potentially excellent inoculant for paddy rice silage.", "link"=>"http://www.mendeley.com/research/characterization-identification-application-lactic-acid-bacteria-isolated-forage-paddy-rice-silage", "reader_count"=>44, "reader_count_by_academic_status"=>{"Unspecified"=>2, "Professor > Associate Professor"=>2, "Researcher"=>3, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>7, "Student > Postgraduate"=>3, "Student > Master"=>12, "Student > Bachelor"=>11, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1}, "reader_count_by_user_role"=>{"Unspecified"=>2, "Professor > Associate Professor"=>2, "Researcher"=>3, "Student > Doctoral Student"=>2, "Student > Ph. D. Student"=>7, "Student > Postgraduate"=>3, "Student > Master"=>12, "Student > Bachelor"=>11, "Lecturer"=>1, "Lecturer > Senior Lecturer"=>1}, "reader_count_by_subject_area"=>{"Unspecified"=>4, "Engineering"=>3, "Environmental Science"=>1, "Biochemistry, Genetics and Molecular Biology"=>5, "Agricultural and Biological Sciences"=>23, "Veterinary Science and Veterinary Medicine"=>1, "Business, Management and Accounting"=>1, "Chemistry"=>2, "Immunology and Microbiology"=>4}, "reader_count_by_subdiscipline"=>{"Engineering"=>{"Engineering"=>3}, "Chemistry"=>{"Chemistry"=>2}, "Immunology and Microbiology"=>{"Immunology and Microbiology"=>4}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>23}, "Business, Management and Accounting"=>{"Business, Management and Accounting"=>1}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>5}, "Unspecified"=>{"Unspecified"=>4}, "Environmental Science"=>{"Environmental Science"=>1}, "Veterinary Science and Veterinary Medicine"=>{"Veterinary Science and Veterinary Medicine"=>1}}, "reader_count_by_country"=>{"Argentina"=>1, "Brazil"=>1, "Indonesia"=>1}, "group_count"=>0}

Scopus | Further Information

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Figshare

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  • {"files"=>["https://ndownloader.figshare.com/files/1984168"], "description"=>"<p>Bootstrap values for 100 replicates are shown at the nodes of the tree. <i>Bacillus subtilis</i> is used as an outgroup. The bar indicates 1% sequence divergence. <i>Ln</i>. = <i>Leuconostoc</i>; <i>Lc</i>. = <i>Lactococcus</i>; <i>P</i>. = <i>Pediococcus</i>; and <i>E</i>. = <i>Enterococcus</i>. <i>K</i>nuc = nucleotide substitution rate.</p>", "links"=>[], "tags"=>["strain R 465", "lab", "paddy rice silage preparation", "lactic acid", "Forage Paddy Rice Silage", "lactic acid bacteria", "paddy rice silage", "16 S rRNA"], "article_id"=>1352348, "categories"=>["Biological Sciences"], "users"=>["Kuikui Ni", "Yanping Wang", "Dongxia Li", "Yimin Cai", "Huili Pang"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0121967.g001", "stats"=>{"downloads"=>1, "page_views"=>15, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phylogenetic_tree_showing_the_relative_positions_of_isolates_R_413_R_419_R420_R_421_R_423_and_R_442_as_referred_by_the_neighbor_joining_method_of_complete_16S_rDNA_sequences_/1352348", "title"=>"Phylogenetic tree showing the relative positions of isolates R 413, R 419, R420, R 421, R 423 and R 442 as referred by the neighbor-joining method of complete 16S rDNA sequences.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-03-24 03:00:37"}
  • {"files"=>["https://ndownloader.figshare.com/files/1984171"], "description"=>"<p>Lane M contained a 600 bp PLUS DNA ladder (Tiangen Biotech Co, Ltd., Beijing, China). Lanes 1, 2, 3, 4 and 5, PCR amplication products from <i>L</i>. <i>casei</i> JCM 16167<sup>T</sup> (negative control), <i>L</i>. <i>paraplantarum</i> JCM 12533<sup>T</sup>, <i>L</i>. <i>pentosus</i> JCM 1558<sup>T</sup>, <i>L</i>. <i>plantarum</i> subsp. <i>plantarum</i> JCM 1149<sup>T</sup> and <i>L</i>. <i>plantarum</i> subsp. <i>argentoratensis</i> JCM 16169<sup>T</sup>, respectively; Lane 6, PCR amplification product from R 422.</p>", "links"=>[], "tags"=>["strain R 465", "lab", "paddy rice silage preparation", "lactic acid", "Forage Paddy Rice Silage", "lactic acid bacteria", "paddy rice silage", "16 S rRNA"], "article_id"=>1352351, "categories"=>["Biological Sciences"], "users"=>["Kuikui Ni", "Yanping Wang", "Dongxia Li", "Yimin Cai", "Huili Pang"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0121967.g003", "stats"=>{"downloads"=>2, "page_views"=>6, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Amplification_products_obtained_from_the_recA_multiplex_assay_/1352351", "title"=>"Amplification products obtained from the <i>recA</i> multiplex assay.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-03-24 03:00:37"}

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Relative Metric

{"start_date"=>"2015-01-01T00:00:00Z", "end_date"=>"2015-12-31T00:00:00Z", "subject_areas"=>[]}
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