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{"title"=>"Phytohormone profiling across the bryophytes", "type"=>"journal", "authors"=>[{"first_name"=>"Lenka Záveská", "last_name"=>"Drábková", "scopus_author_id"=>"7801514190"}, {"first_name"=>"Petre I.", "last_name"=>"Dobrev", "scopus_author_id"=>"7004741719"}, {"first_name"=>"Václav", "last_name"=>"Motyka", "scopus_author_id"=>"6603080039"}], "year"=>2015, "source"=>"PLoS ONE", "identifiers"=>{"pmid"=>"25974061", "sgr"=>"84929377827", "doi"=>"10.1371/journal.pone.0125411", "scopus"=>"2-s2.0-84929377827", "pui"=>"604377712", "isbn"=>"1932-6203", "issn"=>"19326203"}, "id"=>"e03b1e18-e11b-3dfb-995d-a4d8398927fe", "abstract"=>"Background Bryophytes represent a very diverse group of non-vascular plants such as mosses, liver-worts and hornworts and the oldest extant lineage of land plants. Determination of endogenous phytohormone profiles in bryophytes can provide substantial information about early land plant evolution. In this study, we screened thirty bryophyte species including six liver-worts and twenty-four mosses for their phytohormone profiles in order to relate the hormo-nome with phylogeny in the plant kingdom. Methodology Samples belonging to nine orders (Pelliales, Jungermanniales, Porellales, Sphagnales, Tetraphidales, Polytrichales, Dicranales, Bryales, Hypnales) were collected in Central and Northern Bohemia. The phytohormone content was analysed with a high performance liquid chromatography electrospray tandem-mass spectrometry (HPLC-ESI-MS/MS). Principal Findings As revealed for growth hormones, some common traits such as weak conjugation of both cytokinins and auxins, intensive production of cisZ-type cytokinins and strong oxidative degradation of auxins with abundance of a major primary catabolite 2-oxindole-3-acetic acid were pronounced in all bryophytes. Whereas apparent dissimilarities in growth hormones profiles between liverworts and mosses were evident, no obvious trends in stress hormone levels (abscisic acid, jasmonic acid, salicylic acid) were found with respect to the phylogeny. Conclusion The apparent differences in conjugation and/or degradation strategies of growth hormones between liverworts and mosses might potentially show a hidden link between vascular plants and liverworts. On the other hand, the complement of stress hormones in bryophytes probably correlate rather with prevailing environmental conditions and plant survival strategy than with plant evolution.", "link"=>"http://www.mendeley.com/research/phytohormone-profiling-across-bryophytes", "reader_count"=>28, "reader_count_by_academic_status"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>8, "Student > Master"=>2, "Student > Bachelor"=>7, "Professor"=>3}, "reader_count_by_user_role"=>{"Unspecified"=>1, "Professor > Associate Professor"=>1, "Researcher"=>3, "Student > Doctoral Student"=>3, "Student > Ph. D. Student"=>8, "Student > Master"=>2, "Student > Bachelor"=>7, "Professor"=>3}, "reader_count_by_subject_area"=>{"Unspecified"=>4, "Environmental Science"=>1, "Biochemistry, Genetics and Molecular Biology"=>7, "Agricultural and Biological Sciences"=>15, "Medicine and Dentistry"=>1}, "reader_count_by_subdiscipline"=>{"Medicine and Dentistry"=>{"Medicine and Dentistry"=>1}, "Agricultural and Biological Sciences"=>{"Agricultural and Biological Sciences"=>15}, "Biochemistry, Genetics and Molecular Biology"=>{"Biochemistry, Genetics and Molecular Biology"=>7}, "Unspecified"=>{"Unspecified"=>4}, "Environmental Science"=>{"Environmental Science"=>1}}, "group_count"=>0}

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• http://doi.org/10.15407/ukrbotj76.01.071
• http://doi.org/10.1073/pnas.1900482116
• http://doi.org/10.1002/ece3.5205
• http://doi.org/10.1093/jxb/erx221
• http://doi.org/10.1186/s13007-016-0130-x
• http://doi.org/10.1146/annurev-phyto-080516-035544
• http://doi.org/10.1038/s41589-018-0033-4
• http://doi.org/10.1016/j.cub.2019.05.079
• http://doi.org/10.1093/jxb/erx255
• http://doi.org/10.1093/aob/mcw194
• http://doi.org/10.1093/pcp/pcz006
• http://doi.org/10.1093/jxb/erw470
• http://doi.org/10.1007/s00344-017-9738-y
• http://doi.org/10.1007/s00344-019-09945-6
• http://doi.org/10.1146/annurev-arplant-042817-040047
• http://doi.org/10.15407/ukrbotj75.04.384
• http://doi.org/10.1007/s00344-015-9558-x
• http://doi.org/10.1080/19420889.2018.1486168
• http://doi.org/10.1016/j.tplants.2019.05.006
• http://doi.org/10.1111/pce.13131
• http://doi.org/10.1038/nchembio.2540

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Figshare

• {"files"=>["https://ndownloader.figshare.com/files/2068107"], "description"=>"<p>For complete list of analyzed species see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s001\" target=\"_blank\">S1 Table</a>.</p>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415072, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0125411.g001", "stats"=>{"downloads"=>5, "page_views"=>210, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Simplified_phylogenetic_tree_of_bryophytes_with_selected_representatives_used_in_the_study_/1415072", "title"=>"Simplified phylogenetic tree of bryophytes with selected representatives used in the study.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-05-14 03:13:44"}
• {"files"=>["https://ndownloader.figshare.com/files/2068127"], "description"=>"<p><b>A.</b> Abscisic acid (ABA); <b>B.</b> Sum of ABA catabolites: dihydrophaseic acid (DPA) + phaseic acid (PA) + neophaseic acid (neoPA); <b>C.</b> ABA glucosylester (ABA-GE); <b>D.</b> 9-hydroxy-ABA (9OH-ABA). The results are shown as mean values; for complete data containing standard deviations of the means and coefficients of variance see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s005\" target=\"_blank\">S5 Table</a>.</p>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415089, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0125411.g004", "stats"=>{"downloads"=>1, "page_views"=>26, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Endogenous_concentration_pmol_g_FW_of_A_abscisic_acid_and_B_D_its_derivatives_in_bryophytes_/1415089", "title"=>"Endogenous concentration (pmol/g FW) of (A) abscisic acid and (B-D) its derivatives in bryophytes.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-05-14 03:13:44"}
• {"files"=>["https://ndownloader.figshare.com/files/2068128"], "description"=>"<p><b>A.</b> Salicylic acid (SA); <b>B.</b> Sum of JA and JA-ILE. The results are shown as mean values; for complete data containing standard deviations of the means and coefficients of variance see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s005\" target=\"_blank\">S5 Table</a>.</p>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415090, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0125411.g005", "stats"=>{"downloads"=>6, "page_views"=>52, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Endogenous_concentration_pmol_g_FW_of_A_salicylic_acid_SA_and_B_jasmonic_acid_JA_plus_its_isoleucine_conjugate_JA_ILE_in_bryophytes_/1415090", "title"=>"Endogenous concentration (pmol/g FW) of (A) salicylic acid (SA) and (B) jasmonic acid (JA) plus its isoleucine conjugate (JA-ILE) in bryophytes.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-05-14 03:13:44"}
• {"files"=>["https://ndownloader.figshare.com/files/2068110"], "description"=>"<p><b>A.</b> Proportions of <i>trans</i>-zeatin (<i>trans</i>Z), dihydrozeatin (DHZ), <i>cis</i>-zeatin (<i>cis</i>Z) and <i>N</i>⁶-(Δ²-isopentenyl)adenine (iP) types expressed as a percentage of the total CK pool; <b>B.</b> Proportional distribution between <i>trans</i>Z- and <i>cis</i>Z-type CKs; <b>C.</b> Proportions of bioactive forms (free bases and ribosides), <i>N</i>-glucosides (deactivation forms), <i>O</i>-glucosides (storage forms) and CK phosphates expressed as a percentage of the total CK pool. For details see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s001\" target=\"_blank\">S1</a> and <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s003\" target=\"_blank\">S3</a> Tables.</p>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415075, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0125411.g002", "stats"=>{"downloads"=>5, "page_views"=>25, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Proportions_of_particular_cytokinin_CK_groups_to_the_whole_CK_contents_in_bryophytes_/1415075", "title"=>"Proportions of particular cytokinin (CK) groups to the whole CK contents in bryophytes.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-05-14 03:13:44"}
• {"files"=>["https://ndownloader.figshare.com/files/2068133", "https://ndownloader.figshare.com/files/2068134", "https://ndownloader.figshare.com/files/2068135", "https://ndownloader.figshare.com/files/2068136", "https://ndownloader.figshare.com/files/2068137"], "description"=>"<div><p>Background</p><p>Bryophytes represent a very diverse group of non-vascular plants such as mosses, liverworts and hornworts and the oldest extant lineage of land plants. Determination of endogenous phytohormone profiles in bryophytes can provide substantial information about early land plant evolution. In this study, we screened thirty bryophyte species including six liverworts and twenty-four mosses for their phytohormone profiles in order to relate the hormonome with phylogeny in the plant kingdom.</p><p>Methodology</p><p>Samples belonging to nine orders (Pelliales, Jungermanniales, Porellales, Sphagnales, Tetraphidales, Polytrichales, Dicranales, Bryales, Hypnales) were collected in Central and Northern Bohemia. The phytohormone content was analysed with a high performance liquid chromatography electrospray tandem-mass spectrometry (HPLC-ESI-MS/MS).</p><p>Principal Findings</p><p>As revealed for growth hormones, some common traits such as weak conjugation of both cytokinins and auxins, intensive production of <i>cis</i>Z-type cytokinins and strong oxidative degradation of auxins with abundance of a major primary catabolite 2-oxindole-3-acetic acid were pronounced in all bryophytes. Whereas apparent dissimilarities in growth hormones profiles between liverworts and mosses were evident, no obvious trends in stress hormone levels (abscisic acid, jasmonic acid, salicylic acid) were found with respect to the phylogeny.</p><p>Conclusion</p><p>The apparent differences in conjugation and/or degradation strategies of growth hormones between liverworts and mosses might potentially show a hidden link between vascular plants and liverworts. On the other hand, the complement of stress hormones in bryophytes probably correlate rather with prevailing environmental conditions and plant survival strategy than with plant evolution.</p></div>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415092, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>["https://dx.doi.org/10.1371/journal.pone.0125411.s001", "https://dx.doi.org/10.1371/journal.pone.0125411.s002", "https://dx.doi.org/10.1371/journal.pone.0125411.s003", "https://dx.doi.org/10.1371/journal.pone.0125411.s004", "https://dx.doi.org/10.1371/journal.pone.0125411.s005"], "stats"=>{"downloads"=>32, "page_views"=>22, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Phytohormone_Profiling_across_the_Bryophytes_/1415092", "title"=>"Phytohormone Profiling across the Bryophytes", "pos_in_sequence"=>0, "defined_type"=>4, "published_date"=>"2015-05-14 03:13:44"}
• {"files"=>["https://ndownloader.figshare.com/files/2068120"], "description"=>"<p><b>A.</b> Proportions of indole-3-acetic acid (IAA) and 2-oxindole-3-acetic acid (oxIAA) expressed as a percentage of the total auxin pool; <b>B.</b> Proportions of IAA amino acid conjugates, IAA-aspartate (IAA-Asp) and IAA-glutamate (IAA-Glu), expressed as a percentage of the total auxin pool. For details see <a href=\"http://www.plosone.org/article/info:doi/10.1371/journal.pone.0125411#pone.0125411.s004\" target=\"_blank\">S4 Table</a>.</p>", "links"=>[], "tags"=>["stress hormone levels", "bryophyte", "land plant evolution", "acid", "growth hormones", "plant survival strategy", "growth hormones profiles", "liverwort", "phytohormone profiles", "mosse"], "article_id"=>1415082, "categories"=>["Biological Sciences"], "users"=>["Lenka Záveská Drábková", "Petre I. Dobrev", "Václav Motyka"], "doi"=>"https://dx.doi.org/10.1371/journal.pone.0125411.g003", "stats"=>{"downloads"=>0, "page_views"=>23, "likes"=>0}, "figshare_url"=>"https://figshare.com/articles/_Proportions_of_particular_auxin_derivatives_to_the_whole_auxin_contents_in_bryophytes_/1415082", "title"=>"Proportions of particular auxin derivatives to the whole auxin contents in bryophytes.", "pos_in_sequence"=>0, "defined_type"=>1, "published_date"=>"2015-05-14 03:13:44"}

PMC Usage Stats | Further Information

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• {"unique-ip"=>"18", "full-text"=>"22", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"8", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2016", "month"=>"2"}
• {"unique-ip"=>"22", "full-text"=>"16", "pdf"=>"13", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"11"}
• {"unique-ip"=>"15", "full-text"=>"12", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2015", "month"=>"12"}
• {"unique-ip"=>"13", "full-text"=>"10", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2016", "month"=>"1"}
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• {"unique-ip"=>"21", "full-text"=>"33", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"2", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2016", "month"=>"11"}
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• {"unique-ip"=>"25", "full-text"=>"30", "pdf"=>"5", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"1"}
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• {"unique-ip"=>"32", "full-text"=>"32", "pdf"=>"2", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"5", "supp-data"=>"2", "cited-by"=>"0", "year"=>"2017", "month"=>"3"}
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• {"unique-ip"=>"17", "full-text"=>"19", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"6"}
• {"unique-ip"=>"20", "full-text"=>"20", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"3", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"7"}
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• {"unique-ip"=>"38", "full-text"=>"45", "pdf"=>"9", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"7", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2017", "month"=>"9"}
• {"unique-ip"=>"38", "full-text"=>"42", "pdf"=>"6", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"12", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"10"}
• {"unique-ip"=>"39", "full-text"=>"48", "pdf"=>"3", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"17", "supp-data"=>"1", "cited-by"=>"1", "year"=>"2017", "month"=>"11"}
• {"unique-ip"=>"33", "full-text"=>"36", "pdf"=>"4", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"6", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2017", "month"=>"12"}
• {"unique-ip"=>"18", "full-text"=>"25", "pdf"=>"0", "abstract"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"1"}
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• {"unique-ip"=>"8", "full-text"=>"9", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"1", "year"=>"2018", "month"=>"9"}
• {"unique-ip"=>"22", "full-text"=>"29", "pdf"=>"0", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2018", "month"=>"4"}
• {"unique-ip"=>"21", "full-text"=>"23", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2018", "month"=>"5"}
• {"unique-ip"=>"18", "full-text"=>"14", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"5", "cited-by"=>"0", "year"=>"2018", "month"=>"6"}
• {"unique-ip"=>"13", "full-text"=>"14", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"7", "cited-by"=>"0", "year"=>"2018", "month"=>"7"}
• {"unique-ip"=>"13", "full-text"=>"13", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"10"}
• {"unique-ip"=>"16", "full-text"=>"17", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"8"}
• {"unique-ip"=>"16", "full-text"=>"20", "pdf"=>"4", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"1", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2018", "month"=>"12"}
• {"unique-ip"=>"29", "full-text"=>"23", "pdf"=>"15", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"2"}
• {"unique-ip"=>"18", "full-text"=>"22", "pdf"=>"2", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"3"}
• {"unique-ip"=>"17", "full-text"=>"20", "pdf"=>"5", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"4", "cited-by"=>"0", "year"=>"2019", "month"=>"4"}
• {"unique-ip"=>"25", "full-text"=>"23", "pdf"=>"8", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"1", "cited-by"=>"0", "year"=>"2019", "month"=>"5"}
• {"unique-ip"=>"21", "full-text"=>"21", "pdf"=>"1", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"8"}
• {"unique-ip"=>"20", "full-text"=>"22", "pdf"=>"3", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"9"}
• {"unique-ip"=>"37", "full-text"=>"40", "pdf"=>"7", "scanned-summary"=>"0", "scanned-page-browse"=>"0", "figure"=>"0", "supp-data"=>"0", "cited-by"=>"0", "year"=>"2019", "month"=>"10"}

Relative Metric

{"start_date"=>"2015-01-01T00:00:00Z", "end_date"=>"2015-12-31T00:00:00Z", "subject_areas"=>[]}

F1000Prime